RNA–Protein interactions for RNA: ENST00000390392.3

TRBV4-2-201, Transcript of T cell receptor beta variable 4-2, humanhuman

APPRIS P1 BASIC

Gene TRBV4-2, Length 455 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-2-201ENST00000390392 MT-CO3P00414 261 aa13.73□□□□□ -0.21
TRBV4-2-201ENST00000390392 EIF4A3P38919 411 aaKnown RBP13.73□□□□□ -0.21
TRBV4-2-201ENST00000390392 ARL4AP40617 200 aa13.73□□□□□ -0.21
TRBV4-2-201ENST00000390392 LRRC14Q15048 493 aa13.73□□□□□ -0.21
TRBV4-2-201ENST00000390392 KLHL40Q2TBA0 621 aa13.73□□□□□ -0.21
TRBV4-2-201ENST00000390392 LVRNQ6Q4G3 990 aa13.73□□□□□ -0.21
TRBV4-2-201ENST00000390392 LRRC69Q6ZNQ3 347 aa13.73□□□□□ -0.21
TRBV4-2-201ENST00000390392 SRLQ86TD4 932 aa13.73□□□□□ -0.21
TRBV4-2-201ENST00000390392 LRRC49Q8IUZ0 686 aa13.73□□□□□ -0.21
TRBV4-2-201ENST00000390392 BBS5Q8N3I7 341 aa13.73□□□□□ -0.21
TRBV4-2-201ENST00000390392 ARFGAP1Q8N6T3 406 aa13.73□□□□□ -0.21
TRBV4-2-201ENST00000390392 ZNF548Q8NEK5 533 aaPredicted RBP13.73□□□□□ -0.21
TRBV4-2-201ENST00000390392 SCG3Q8WXD2 468 aaKnown RBP13.73□□□□□ -0.21
TRBV4-2-201ENST00000390392 ZNF653Q96CK0 615 aa13.73□□□□□ -0.21
TRBV4-2-201ENST00000390392 FUCA2Q9BTY2 467 aa13.73□□□□□ -0.21
TRBV4-2-201ENST00000390392 SNRNP25Q9BV90 132 aaKnown RBP13.73□□□□□ -0.21
TRBV4-2-201ENST00000390392 SLC13A1Q9BZW2 595 aa13.73□□□□□ -0.21
TRBV4-2-201ENST00000390392 SP110Q9HB58 689 aa13.73□□□□□ -0.21
TRBV4-2-201ENST00000390392 RAXQ9Y2V3 346 aa13.73□□□□□ -0.21
TRBV4-2-201ENST00000390392 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.72□□□□□ -0.21
TRBV4-2-201ENST00000390392 EME2A4GXA9 379 aaPredicted RBP13.72□□□□□ -0.21
TRBV4-2-201ENST00000390392 GOLGA6L19H0YKK7 550 aa13.72□□□□□ -0.21
TRBV4-2-201ENST00000390392 H3BRJ5 948 aa13.72□□□□□ -0.21
TRBV4-2-201ENST00000390392 SPINT1O43278 529 aa13.72□□□□□ -0.21
TRBV4-2-201ENST00000390392 OPA1O60313 960 aa13.72□□□□□ -0.21
TRBV4-2-201ENST00000390392 LRCH4O75427 683 aa13.72□□□□□ -0.21
TRBV4-2-201ENST00000390392 ACTN2P35609 894 aa13.72□□□□□ -0.21
TRBV4-2-201ENST00000390392 HSPA9P38646 679 aaKnown RBP13.72□□□□□ -0.21
TRBV4-2-201ENST00000390392 UBASH3AP57075 661 aa13.72□□□□□ -0.21
TRBV4-2-201ENST00000390392 ZBED6P86452 979 aa13.72□□□□□ -0.21
TRBV4-2-201ENST00000390392 PPARDQ03181 441 aa13.72□□□□□ -0.21
TRBV4-2-201ENST00000390392 BCL2L1Q07817 233 aa13.72□□□□□ -0.21
TRBV4-2-201ENST00000390392 EIF2B5Q13144 721 aaKnown RBP13.72□□□□□ -0.21
TRBV4-2-201ENST00000390392 ZNF542PQ5EBM4 170 aa13.72□□□□□ -0.21
TRBV4-2-201ENST00000390392 PPP6R3Q5H9R7 873 aaPredicted RBP13.72□□□□□ -0.21
TRBV4-2-201ENST00000390392 RALGPS1Q5JS13 557 aa13.72□□□□□ -0.21
TRBV4-2-201ENST00000390392 FAXCQ5TGI0 409 aa13.72□□□□□ -0.21
TRBV4-2-201ENST00000390392 CDCP2Q5VXM1 449 aa13.72□□□□□ -0.21
TRBV4-2-201ENST00000390392 MACC1Q6ZN28 852 aa13.72□□□□□ -0.21
TRBV4-2-201ENST00000390392 FSTL5Q8N475 847 aaPredicted RBP13.72□□□□□ -0.21
TRBV4-2-201ENST00000390392 TP53I13Q8NBR0 393 aaPredicted RBP13.72□□□□□ -0.21
TRBV4-2-201ENST00000390392 DEPDC7Q96QD5 511 aa13.72□□□□□ -0.21
TRBV4-2-201ENST00000390392 CINPQ9BW66 212 aaPredicted RBP13.72□□□□□ -0.21
TRBV4-2-201ENST00000390392 CWC15Q9P013 229 aaKnown RBP13.72□□□□□ -0.21
TRBV4-2-201ENST00000390392 SEPT3Q9UH03 358 aa13.72□□□□□ -0.21
TRBV4-2-201ENST00000390392 IP6K2Q9UHH9 426 aa13.72□□□□□ -0.21
TRBV4-2-201ENST00000390392 ITM2BQ9Y287 266 aa13.72□□□□□ -0.21
TRBV4-2-201ENST00000390392 SPEGQ15772 3267 aa13.72□□□□□ -0.21
TRBV4-2-201ENST00000390392 IGF2RP11717 2491 aa13.72□□□□□ -0.21
TRBV4-2-201ENST00000390392 LMO7DNF2Z398 122 aa13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 INSIG1O15503 277 aa13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 LZTS3O60299 673 aaPredicted RBP13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 SERPING1P05155 500 aa13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 ANXA6P08133 673 aa13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 HOXC4P09017 264 aaPredicted RBP13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 ALPIP09923 528 aa13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 EIF2S3P41091 472 aaKnown RBP13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 AP1S1P61966 158 aa13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 FANCCQ00597 558 aa13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 ELOCQ15369 112 aa13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 NR0B2Q15466 257 aa13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 DPYSL2Q16555 572 aa13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 CA9Q16790 459 aa13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 ESRP1Q6NXG1 681 aaKnown RBP13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 MARCH9Q86YJ5 346 aa13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 TSEN2Q8NCE0 465 aaKnown RBP13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 OR6C4Q8NGE1 309 aa13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 LMX1AQ8TE12 382 aa13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 NSMCE1Q8WV22 266 aa13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 HNRNPLLQ8WVV9 542 aaKnown RBP13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 TEKT4Q8WW24 435 aa13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 SPOCK2Q92563 424 aa13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 FGF11Q92914 225 aa13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 NAT6Q93015 286 aa13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 ECHDC3Q96DC8 303 aa13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 CELF6Q96J87 481 aaKnown RBP13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 PSKH2Q96QS6 385 aa13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 KCTD15Q96SI1 283 aaPredicted RBP13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 PCDH12Q9NPG4 1184 aa13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 MYO1AQ9UBC5 1043 aa13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 APOBEC3BQ9UH17 382 aaKnown RBP13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 LCMT1Q9UIC8 334 aa13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 KLF15Q9UIH9 416 aa13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 GGT7Q9UJ14 662 aa13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 CAPN11Q9UMQ6 739 aa13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 ATP8A1Q9Y2Q0 1164 aa13.71□□□□□ -0.21
TRBV4-2-201ENST00000390392 DMXL2Q8TDJ6 3036 aa13.71□□□□□ -0.22
TRBV4-2-201ENST00000390392 ACACAQ13085 2346 aa13.7□□□□□ -0.22
TRBV4-2-201ENST00000390392 ANKRD36A6QL64 1941 aa13.7□□□□□ -0.22
TRBV4-2-201ENST00000390392 FAM208BQ5VWN6 2430 aa13.7□□□□□ -0.22
TRBV4-2-201ENST00000390392 DFFAO00273 331 aa13.7□□□□□ -0.22
TRBV4-2-201ENST00000390392 PDE2AO00408 941 aaPredicted RBP13.7□□□□□ -0.22
TRBV4-2-201ENST00000390392 BUB1BO60566 1050 aaPredicted RBP13.7□□□□□ -0.22
TRBV4-2-201ENST00000390392 TCEA3O75764 348 aa13.7□□□□□ -0.22
TRBV4-2-201ENST00000390392 PIGNO95427 931 aa13.7□□□□□ -0.22
TRBV4-2-201ENST00000390392 TPM3P06753 285 aa13.7□□□□□ -0.22
TRBV4-2-201ENST00000390392 SKILP12757 684 aa13.7□□□□□ -0.22
TRBV4-2-201ENST00000390392 CTSEP14091 401 aa13.7□□□□□ -0.22
TRBV4-2-201ENST00000390392 KELP23276 732 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms