RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 GGA2Q9UJY4 613 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 RAI2Q9Y5P3 530 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 A0A0U1RQS6 177 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 NDUFAB1O14561 156 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 BNIP3LO60238 219 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 ZNF821O75541 412 aaPredicted RBP12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 MT-ND3P03897 115 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 CYP17A1P05093 508 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 PABPC1P11940 636 aaKnown RBP12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 ARSAP15289 507 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 ARNTP27540 789 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 TRAF2Q12933 501 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 NR1H3Q13133 447 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 PTPRCAPQ14761 206 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 DGKKQ5KSL6 1271 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 NCEH1Q6PIU2 408 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 PNPLA1Q8N8W4 532 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 SMARCD2Q92925 531 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 RMDN1Q96DB5 314 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 SMC6Q96SB8 1091 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 TDRD1Q9BXT4 1180 aaKnown RBP12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 EPN3Q9H201 632 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 EBF3Q9H4W6 596 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 CNOT10Q9H9A5 744 aaKnown RBP12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 TREX1Q9NSU2 369 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 HAUS2Q9NVX0 235 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 EVLQ9UI08 416 aaPredicted RBP12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 ZNF180Q9UJW8 692 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 ARL5AQ9Y689 179 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 HEPACAM2A8MVW5 462 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 NDST3O95803 873 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 SNRPAP09012 282 aaKnown RBP12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 SLC8A1P32418 973 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 PLK1P53350 603 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 EML3Q32P44 896 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 TMEM215Q68D42 235 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 TANGO2Q6ICL3 276 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 TMEM184AQ6ZMB5 413 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 C12orf40Q86WS4 652 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 LPCAT1Q8NF37 534 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 OSCP1Q8WVF1 389 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 SORCS1Q8WY21 1168 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 CLEC1BQ9P126 229 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 PRKAG3Q9UGI9 489 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 SLCO3A1Q9UIG8 710 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 ACTL7BQ9Y614 415 aa12.29□□□□□ -0.44
SPTBN1-203ENST00000389980 HEATR9A2RTY3 570 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 OTOL1A6NHN0 477 aaPredicted RBP12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 SLC9A3R1O14745 358 aaPredicted RBP12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 AURKAO14965 403 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 KRT37O76014 449 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 PIGNO95427 931 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 FGF1P05230 155 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 PYGBP11216 843 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 SRCP12931 536 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 HLA-DPA1P20036 260 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 RPA3P35244 121 aaPredicted RBP12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 ARCN1P48444 511 aaKnown RBP12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 TMPRSS15P98073 1019 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 NSUN2Q08J23 767 aaKnown RBP eCLIP12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 MESP2Q0VG99 397 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 GEN1Q17RS7 908 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 TSTD2Q5T7W7 516 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 STRA8Q7Z7C7 330 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 ADIPOR2Q86V24 386 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 CAMK1DQ8IU85 385 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 GDAP1Q8TB36 358 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 BPIFB1Q8TDL5 484 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 ATXN2LQ8WWM7 1075 aaKnown RBP12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 OTUB2Q96DC9 234 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 INTS9Q9NV88 658 aaKnown RBP12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 SPO11Q9Y5K1 396 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 LDB2O43679 373 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 KRT38O76015 456 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 EPOP01588 193 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 SLC4A1P02730 911 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 ADH5P11766 374 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 CA4P22748 312 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 FCARP24071 287 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 ARSDP51689 593 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 CTBP1Q13363 440 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 ADAM15Q13444 863 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 SLC12A1Q13621 1099 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 ACCSLQ4AC99 568 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 DENND6AQ8IWF6 608 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 RYBPQ8N488 228 aaPredicted RBP12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 OR13J1Q8NGT2 312 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 TTC8Q8TAM2 541 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 ZNF473Q8WTR7 871 aaKnown RBP12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 CYB5D2Q8WUJ1 264 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 PTCD2Q8WV60 388 aaKnown RBP12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 CCT8L2Q96SF2 557 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 MRM3Q9HC36 420 aaKnown RBP12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.28□□□□□ -0.442e-7■□□□□ 9.6
SPTBN1-203ENST00000389980 MARK1Q9P0L2 795 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 TXNDC16Q9P2K2 825 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 GGT7Q9UJ14 662 aa12.28□□□□□ -0.44
SPTBN1-203ENST00000389980 KIF26AQ9ULI4 1882 aaPredicted RBP12.27□□□□□ -0.44
SPTBN1-203ENST00000389980 MROH6A6NGR9 719 aa12.27□□□□□ -0.45
SPTBN1-203ENST00000389980 FAM47DPA6NHR8 397 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms