RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 BLOC1S6Q9UL45 172 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 PSAT1Q9Y617 370 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 TRIM38O00635 465 aa9.02□□□□□ -0.96
GPNMB-202ENST00000381990 DGKIO75912 1065 aa9.02□□□□□ -0.96
GPNMB-202ENST00000381990 OAZ2O95190 189 aa9.02□□□□□ -0.96
GPNMB-202ENST00000381990 BMP10O95393 424 aa9.02□□□□□ -0.96
GPNMB-202ENST00000381990 IDO1P14902 403 aa9.02□□□□□ -0.96
GPNMB-202ENST00000381990 OR1G1P47890 313 aa9.02□□□□□ -0.96
GPNMB-202ENST00000381990 LIMK2P53671 638 aa9.02□□□□□ -0.96
GPNMB-202ENST00000381990 PRKAA1Q13131 559 aa9.02□□□□□ -0.96
GPNMB-202ENST00000381990 GK3PQ14409 553 aa9.02□□□□□ -0.96
GPNMB-202ENST00000381990 PPP2R5DQ14738 602 aa9.02□□□□□ -0.96
GPNMB-202ENST00000381990 ARL13BQ3SXY8 428 aa9.02□□□□□ -0.96
GPNMB-202ENST00000381990 PPM1JQ5JR12 505 aa9.02□□□□□ -0.96
GPNMB-202ENST00000381990 BSPRYQ5W0U4 402 aa9.02□□□□□ -0.96
GPNMB-202ENST00000381990 RWDD4Q6NW29 188 aaKnown RBP9.02□□□□□ -0.96
GPNMB-202ENST00000381990 DUS1LQ6P1R4 473 aaKnown RBP9.02□□□□□ -0.96
GPNMB-202ENST00000381990 BEND5Q7L4P6 421 aa9.02□□□□□ -0.96
GPNMB-202ENST00000381990 CTU1Q7Z7A3 348 aaKnown RBP9.02□□□□□ -0.96
GPNMB-202ENST00000381990 GALNT4Q8N4A0 578 aa9.02□□□□□ -0.96
GPNMB-202ENST00000381990 ZBTB8BQ8NAP8 495 aaPredicted RBP9.02□□□□□ -0.96
GPNMB-202ENST00000381990 MAPK15Q8TD08 544 aa9.02□□□□□ -0.96
GPNMB-202ENST00000381990 VPS50Q96JG6 964 aa9.02□□□□□ -0.96
GPNMB-202ENST00000381990 DRC3Q9H069 523 aa9.02□□□□□ -0.96
GPNMB-202ENST00000381990 TMPRSS4Q9NRS4 437 aa9.02□□□□□ -0.96
GPNMB-202ENST00000381990 OXSMQ9NWU1 459 aa9.02□□□□□ -0.96
GPNMB-202ENST00000381990 PTBP2Q9UKA9 531 aaKnown RBP9.02□□□□□ -0.96
GPNMB-202ENST00000381990 PAIP2BQ9ULR5 123 aaKnown RBP9.02□□□□□ -0.96
GPNMB-202ENST00000381990 TRIM17Q9Y577 477 aa9.02□□□□□ -0.96
GPNMB-202ENST00000381990 COL4A4P53420 1690 aaPredicted RBP9.02□□□□□ -0.96
GPNMB-202ENST00000381990 CEP350Q5VT06 3117 aa9.02□□□□□ -0.97
GPNMB-202ENST00000381990 H3BNH8 94 aa9.02□□□□□ -0.97
GPNMB-202ENST00000381990 EEF2KO00418 725 aaKnown RBP9.02□□□□□ -0.97
GPNMB-202ENST00000381990 PITPNM1O00562 1244 aa9.02□□□□□ -0.97
GPNMB-202ENST00000381990 ENPP3O14638 875 aa9.02□□□□□ -0.97
GPNMB-202ENST00000381990 TIMM44O43615 452 aa9.02□□□□□ -0.97
GPNMB-202ENST00000381990 NBNO60934 754 aa9.02□□□□□ -0.97
GPNMB-202ENST00000381990 HSPA1AP0DMV8 641 aaKnown RBP9.02□□□□□ -0.97
GPNMB-202ENST00000381990 HSPA1BP0DMV9 641 aaKnown RBP9.02□□□□□ -0.97
GPNMB-202ENST00000381990 ZNF135P52742 658 aaPredicted RBP9.02□□□□□ -0.97
GPNMB-202ENST00000381990 ESRRGP62508 458 aa9.02□□□□□ -0.97
GPNMB-202ENST00000381990 MS4A2Q01362 244 aa9.02□□□□□ -0.97
GPNMB-202ENST00000381990 SEMA3BQ13214 749 aa9.02□□□□□ -0.97
GPNMB-202ENST00000381990 LSM12Q3MHD2 195 aaKnown RBP9.02□□□□□ -0.97
GPNMB-202ENST00000381990 MGAT5BQ3V5L5 792 aa9.02□□□□□ -0.97
GPNMB-202ENST00000381990 KRT80Q6KB66 452 aa9.02□□□□□ -0.97
GPNMB-202ENST00000381990 NAPRTQ6XQN6 538 aa9.02□□□□□ -0.97
GPNMB-202ENST00000381990 Q6ZNX1 250 aa9.02□□□□□ -0.97
GPNMB-202ENST00000381990 PATL1Q86TB9 770 aaKnown RBP9.02□□□□□ -0.97
GPNMB-202ENST00000381990 ABI1Q8IZP0 508 aa9.02□□□□□ -0.97
GPNMB-202ENST00000381990 TNS4Q8IZW8 715 aa9.02□□□□□ -0.97
GPNMB-202ENST00000381990 DBF4BQ8NFT6 615 aa9.02□□□□□ -0.97
GPNMB-202ENST00000381990 ADAM32Q8TC27 787 aa9.02□□□□□ -0.97
GPNMB-202ENST00000381990 EDEM1Q92611 657 aa9.02□□□□□ -0.97
GPNMB-202ENST00000381990 RCN3Q96D15 328 aa9.02□□□□□ -0.97
GPNMB-202ENST00000381990 DUS3LQ96G46 650 aaKnown RBP9.02□□□□□ -0.97
GPNMB-202ENST00000381990 RMND5BQ96G75 393 aaPredicted RBP9.02□□□□□ -0.97
GPNMB-202ENST00000381990 COLEC11Q9BWP8 271 aa9.02□□□□□ -0.97
GPNMB-202ENST00000381990 OSBPL6Q9BZF3 934 aa9.02□□□□□ -0.97
GPNMB-202ENST00000381990 NMRAL1Q9HBL8 299 aa9.02□□□□□ -0.97
GPNMB-202ENST00000381990 IPO11Q9UI26 975 aaKnown RBP9.02□□□□□ -0.97
GPNMB-202ENST00000381990 SLC8A2Q9UPR5 921 aa9.02□□□□□ -0.97
GPNMB-202ENST00000381990 CDYLQ9Y232 598 aa9.02□□□□□ -0.97
GPNMB-202ENST00000381990 PRG3Q9Y2Y8 225 aaPredicted RBP9.02□□□□□ -0.97
GPNMB-202ENST00000381990 MFHAS1Q9Y4C4 1052 aa9.02□□□□□ -0.97
GPNMB-202ENST00000381990 SYN3O14994 580 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 MFSD11O43934 449 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 DNAJB1P25685 340 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 MGAT1P26572 445 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 HCAR3P49019 387 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 CXCR3P49682 368 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 TRAP1Q12931 704 aaKnown RBP9.01□□□□□ -0.97
GPNMB-202ENST00000381990 PTK2BQ14289 1009 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 GPNMBQ14956 572 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 PAFAH1B3Q15102 231 aaKnown RBP9.01□□□□□ -0.97
GPNMB-202ENST00000381990 LIPMQ5VYY2 423 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 DCP1BQ8IZD4 617 aaKnown RBP9.01□□□□□ -0.97
GPNMB-202ENST00000381990 DCLK2Q8N568 766 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 SEPT8Q92599 483 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 EFHD1Q9BUP0 239 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 ANKRD60Q9BZ19 345 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 IL22Q9GZX6 179 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 UNC93B1Q9H1C4 597 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 CLK4Q9HAZ1 481 aaKnown RBP9.01□□□□□ -0.97
GPNMB-202ENST00000381990 AP4S1Q9Y587 144 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 PCDHB7Q9Y5E2 793 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 ZNF638Q14966 1978 aaKnown RBP9.01□□□□□ -0.97
GPNMB-202ENST00000381990 A0A096LPK6 155 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 DCLK1O15075 740 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 RNASEH2AO75792 299 aaKnown RBP9.01□□□□□ -0.97
GPNMB-202ENST00000381990 ENO3P13929 434 aaPredicted RBP9.01□□□□□ -0.97
GPNMB-202ENST00000381990 SESN2P58004 480 aaPredicted RBP9.01□□□□□ -0.97
GPNMB-202ENST00000381990 RHDQ02161 417 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 IKBKEQ14164 716 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 TRIM25Q14258 630 aaKnown RBP9.01□□□□□ -0.97
GPNMB-202ENST00000381990 PDK1Q15118 436 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 CYTH1Q15438 398 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 NFE2Q16621 373 aaPredicted RBP9.01□□□□□ -0.97
GPNMB-202ENST00000381990 KCTD21Q4G0X4 260 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 PPM1LQ5SGD2 360 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms