RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 HLA-DQB2P05538 268 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 TIMP2P16035 220 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 ITIH2P19823 946 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 TGM1P22735 817 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 CD27P26842 260 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 HOXD11P31277 338 aaPredicted RBP19.57■□□□□ 0.72
GTF3A-201ENST00000381140 CCR5P51681 352 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 DSC2Q02487 901 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 ZBTB17Q13105 803 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 DUOXA1Q1HG43 343 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 AASDHQ4L235 1098 aaPredicted RBP19.57■□□□□ 0.72
GTF3A-201ENST00000381140 PRPF39Q86UA1 669 aaKnown RBP19.57■□□□□ 0.72
GTF3A-201ENST00000381140 GPR161Q8N6U8 529 aaKnown RBP19.57■□□□□ 0.72
GTF3A-201ENST00000381140 TFB1MQ8WVM0 346 aaKnown RBP19.57■□□□□ 0.72
GTF3A-201ENST00000381140 NSMCE3Q96MG7 304 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 ZNF641Q96N77 438 aaPredicted RBP19.57■□□□□ 0.72
GTF3A-201ENST00000381140 FAM118BQ9BPY3 351 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 POLR1EQ9GZS1 481 aaKnown RBP19.57■□□□□ 0.72
GTF3A-201ENST00000381140 HAUS2Q9NVX0 235 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 DKK3Q9UBP4 350 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 SUSD2Q9UGT4 822 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 PCDHGC4Q9Y5F7 938 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 CACNA1EQ15878 2313 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.57■□□□□ 0.72
GTF3A-201ENST00000381140 H7C0C1 242 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 BCAT2O15382 392 aaPredicted RBP19.57■□□□□ 0.72
GTF3A-201ENST00000381140 PRLRP16471 622 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 CR2P20023 1033 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 ATP5OP48047 213 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 IRX4P78413 519 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 SEMG2Q02383 582 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 RPS6KA1Q15418 735 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 SEL1L3Q68CR1 1132 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 ZSWIM9Q86XI8 627 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 UBE2Q2Q8WVN8 375 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 FATE1Q969F0 183 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 RAB7BQ96AH8 199 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 MYOCQ99972 504 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 NUSAP1Q9BXS6 441 aaKnown RBP19.57■□□□□ 0.72
GTF3A-201ENST00000381140 EBF2Q9HAK2 575 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 AASDHPPTQ9NRN7 309 aa19.57■□□□□ 0.72
GTF3A-201ENST00000381140 ZNF292O60281 2723 aa19.56■□□□□ 0.72
GTF3A-201ENST00000381140 KNL1Q8NG31 2342 aa19.56■□□□□ 0.72
GTF3A-201ENST00000381140 A0A1B0GTW7 788 aa19.56■□□□□ 0.72
GTF3A-201ENST00000381140 A0A1W2PPC4 97 aa19.56■□□□□ 0.72
GTF3A-201ENST00000381140 UPK3BL1B0FP48 263 aa19.56■□□□□ 0.72
GTF3A-201ENST00000381140 UPK3BL2E5RIL1 263 aa19.56■□□□□ 0.72
GTF3A-201ENST00000381140 APOC4-APOC2K7ER74 178 aa19.56■□□□□ 0.72
GTF3A-201ENST00000381140 TJP3O95049 919 aa19.56■□□□□ 0.72
GTF3A-201ENST00000381140 APOC2P02655 101 aa19.56■□□□□ 0.72
GTF3A-201ENST00000381140 PTPN7P35236 360 aa19.56■□□□□ 0.72
GTF3A-201ENST00000381140 HOXD12P35452 270 aa19.56■□□□□ 0.72
GTF3A-201ENST00000381140 IFI35P80217 286 aaPredicted RBP19.56■□□□□ 0.72
GTF3A-201ENST00000381140 PRKD1Q15139 912 aaPredicted RBP19.56■□□□□ 0.72
GTF3A-201ENST00000381140 PEAR1Q5VY43 1037 aaPredicted RBP19.56■□□□□ 0.72
GTF3A-201ENST00000381140 LAYNQ6UX15 382 aa19.56■□□□□ 0.72
GTF3A-201ENST00000381140 RABEPKQ7Z6M1 372 aa19.56■□□□□ 0.72
GTF3A-201ENST00000381140 TRIM69Q86WT6 500 aa19.56■□□□□ 0.72
GTF3A-201ENST00000381140 HORMAD1Q86X24 394 aa19.56■□□□□ 0.72
GTF3A-201ENST00000381140 CEP76Q8TAP6 659 aa19.56■□□□□ 0.72
GTF3A-201ENST00000381140 SERAC1Q96JX3 654 aa19.56■□□□□ 0.72
GTF3A-201ENST00000381140 SLC6A18Q96N87 628 aa19.56■□□□□ 0.72
GTF3A-201ENST00000381140 AGAP3Q96P47 875 aa19.56■□□□□ 0.72
GTF3A-201ENST00000381140 WRAP53Q9BUR4 548 aaKnown RBP19.56■□□□□ 0.72
GTF3A-201ENST00000381140 BRD8Q9H0E9 1235 aa19.56■□□□□ 0.72
GTF3A-201ENST00000381140 TM9SF3Q9HD45 589 aa19.56■□□□□ 0.72
GTF3A-201ENST00000381140 SLC6A14Q9UN76 642 aa19.56■□□□□ 0.72
GTF3A-201ENST00000381140 SLC31A1O15431 190 aa19.55■□□□□ 0.72
GTF3A-201ENST00000381140 SPINT1O43278 529 aa19.55■□□□□ 0.72
GTF3A-201ENST00000381140 AP1G1O43747 822 aa19.55■□□□□ 0.72
GTF3A-201ENST00000381140 OTUD4Q01804 1114 aaKnown RBP19.55■□□□□ 0.72
GTF3A-201ENST00000381140 TRAF2Q12933 501 aa19.55■□□□□ 0.72
GTF3A-201ENST00000381140 SETMARQ53H47 684 aaPredicted RBP19.55■□□□□ 0.72
GTF3A-201ENST00000381140 SEL1L2Q5TEA6 688 aa19.55■□□□□ 0.72
GTF3A-201ENST00000381140 MEI1Q5TIA1 1274 aa19.55■□□□□ 0.72
GTF3A-201ENST00000381140 PAPD7Q5XG87 772 aaKnown RBP19.55■□□□□ 0.72
GTF3A-201ENST00000381140 BRAT1Q6PJG6 821 aa19.55■□□□□ 0.72
GTF3A-201ENST00000381140 ADAT2Q7Z6V5 191 aaKnown RBP19.55■□□□□ 0.72
GTF3A-201ENST00000381140 ACTL9Q8TC94 416 aa19.55■□□□□ 0.72
GTF3A-201ENST00000381140 FEM1CQ96JP0 617 aa19.55■□□□□ 0.72
GTF3A-201ENST00000381140 IL12RB2Q99665 862 aa19.55■□□□□ 0.72
GTF3A-201ENST00000381140 C10orf88Q9H8K7 445 aa19.55■□□□□ 0.72
GTF3A-201ENST00000381140 PCDH12Q9NPG4 1184 aa19.55■□□□□ 0.72
GTF3A-201ENST00000381140 RXFP3Q9NSD7 469 aa19.55■□□□□ 0.72
GTF3A-201ENST00000381140 ZFR2Q9UPR6 939 aaKnown RBP19.55■□□□□ 0.72
GTF3A-201ENST00000381140 EFR3BQ9Y2G0 817 aa19.55■□□□□ 0.72
GTF3A-201ENST00000381140 PCDH15Q96QU1 1955 aa19.54■□□□□ 0.72
GTF3A-201ENST00000381140 TSPAN11A1L157 253 aa19.54■□□□□ 0.72
GTF3A-201ENST00000381140 LATO43561 262 aa19.54■□□□□ 0.72
GTF3A-201ENST00000381140 TSPAN6O43657 245 aa19.54■□□□□ 0.72
GTF3A-201ENST00000381140 GDF9O60383 454 aa19.54■□□□□ 0.72
GTF3A-201ENST00000381140 CPP00450 1065 aa19.54■□□□□ 0.72
GTF3A-201ENST00000381140 SERPINF2P08697 491 aa19.54■□□□□ 0.72
GTF3A-201ENST00000381140 CSNK1EP49674 416 aaKnown RBP19.54■□□□□ 0.72
GTF3A-201ENST00000381140 RPS21P63220 83 aaKnown RBP19.54■□□□□ 0.72
GTF3A-201ENST00000381140 FAM193AP78312 1265 aa19.54■□□□□ 0.72
GTF3A-201ENST00000381140 NIPAL4Q0D2K0 466 aa19.54■□□□□ 0.72
GTF3A-201ENST00000381140 NOMO1Q15155 1222 aa19.54■□□□□ 0.72
GTF3A-201ENST00000381140 UGP2Q16851 508 aa19.54■□□□□ 0.72
GTF3A-201ENST00000381140 ZNF284Q2VY69 593 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms