RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 TMEM151AQ8N4L1 468 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 GIMAP7Q8NHV1 300 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 TADA1Q96BN2 335 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 ZNF558Q96NG5 402 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 RUVBL2Q9Y230 463 aaKnown RBP21.72■■□□□ 1.07
TRIM54-202ENST00000380075 RAP2CQ9Y3L5 183 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.72■■□□□ 1.07
TRIM54-202ENST00000380075 SLCO1B7G3V0H7 640 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 PHGDHO43175 533 aaKnown RBP21.72■■□□□ 1.07
TRIM54-202ENST00000380075 RAMP2O60895 175 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 CNTN5O94779 1100 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 F7P08709 466 aaPredicted RBP21.72■■□□□ 1.07
TRIM54-202ENST00000380075 ZDHHC11BP0C7U3 371 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 PRDX6P30041 224 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 GCKP35557 465 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 CPA2P48052 419 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 ERVK-21P61565 698 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 CTBP1Q13363 440 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 TSTD2Q5T7W7 516 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 C6orf163Q5TEZ5 329 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 ZNF470Q6ECI4 717 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 ANKS3Q6ZW76 656 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 LMNTD2Q8IXW0 634 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.72■■□□□ 1.07
TRIM54-202ENST00000380075 TTC9BQ8N6N2 239 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 ZNF781Q8N8C0 355 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 CMTM5Q96DZ9 223 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 SCYL1Q96KG9 808 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 STOML1Q9UBI4 398 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 ZNF212Q9UDV6 495 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 SLC2A6Q9UGQ3 507 aa21.72■■□□□ 1.07
TRIM54-202ENST00000380075 SLC12A8A0AV02 714 aa21.71■■□□□ 1.07
TRIM54-202ENST00000380075 TARM1B6A8C7 271 aa21.71■■□□□ 1.07
TRIM54-202ENST00000380075 J3KR12 359 aa21.71■■□□□ 1.07
TRIM54-202ENST00000380075 LAMB3Q13751 1172 aa21.71■■□□□ 1.07
TRIM54-202ENST00000380075 POLD3Q15054 466 aaPredicted RBP21.71■■□□□ 1.07
TRIM54-202ENST00000380075 PCSK7Q16549 785 aa21.71■■□□□ 1.07
TRIM54-202ENST00000380075 RAP1GAP2Q684P5 730 aa21.71■■□□□ 1.07
TRIM54-202ENST00000380075 NET1Q7Z628 596 aaPredicted RBP21.71■■□□□ 1.07
TRIM54-202ENST00000380075 SCUBE1Q8IWY4 988 aa21.71■■□□□ 1.07
TRIM54-202ENST00000380075 CENPLQ8N0S6 344 aaPredicted RBP21.71■■□□□ 1.07
TRIM54-202ENST00000380075 TDRD5Q8NAT2 981 aaKnown RBP21.71■■□□□ 1.07
TRIM54-202ENST00000380075 BCL7CQ8WUZ0 217 aaPredicted RBP21.71■■□□□ 1.07
TRIM54-202ENST00000380075 KCTD4Q8WVF5 259 aa21.71■■□□□ 1.07
TRIM54-202ENST00000380075 PABPC5Q96DU9 382 aaKnown RBP21.71■■□□□ 1.07
TRIM54-202ENST00000380075 COG4Q9H9E3 785 aa21.71■■□□□ 1.07
TRIM54-202ENST00000380075 CPSF2Q9P2I0 782 aaKnown RBP21.71■■□□□ 1.07
TRIM54-202ENST00000380075 VWA8A3KMH1 1905 aa21.71■■□□□ 1.07
TRIM54-202ENST00000380075 TK2O00142 265 aa21.7■■□□□ 1.07
TRIM54-202ENST00000380075 CIB2O75838 187 aa21.7■■□□□ 1.07
TRIM54-202ENST00000380075 SAT1P21673 171 aa21.7■■□□□ 1.07
TRIM54-202ENST00000380075 CD86P42081 329 aa21.7■■□□□ 1.07
TRIM54-202ENST00000380075 CHRNA4P43681 627 aa21.7■■□□□ 1.07
TRIM54-202ENST00000380075 CLCN5P51795 746 aa21.7■■□□□ 1.07
TRIM54-202ENST00000380075 SLC12A2P55011 1212 aa21.7■■□□□ 1.07
TRIM54-202ENST00000380075 MXRA7P84157 204 aa21.7■■□□□ 1.07
TRIM54-202ENST00000380075 ITKQ08881 620 aa21.7■■□□□ 1.07
TRIM54-202ENST00000380075 SLC10A7Q0GE19 358 aa21.7■■□□□ 1.07
TRIM54-202ENST00000380075 PRKAA1Q13131 559 aa21.7■■□□□ 1.07
TRIM54-202ENST00000380075 KPNB1Q14974 876 aaKnown RBP21.7■■□□□ 1.07
TRIM54-202ENST00000380075 TRMT5Q32P41 509 aaKnown RBP21.7■■□□□ 1.07
TRIM54-202ENST00000380075 KHDC1Q4VXA5 237 aaKnown RBP21.7■■□□□ 1.07
TRIM54-202ENST00000380075 SNX30Q5VWJ9 437 aa21.7■■□□□ 1.07
TRIM54-202ENST00000380075 MIB1Q86YT6 1006 aa21.7■■□□□ 1.07
TRIM54-202ENST00000380075 FSTL5Q8N475 847 aaPredicted RBP21.7■■□□□ 1.07
TRIM54-202ENST00000380075 KLHL23Q8NBE8 558 aa21.7■■□□□ 1.07
TRIM54-202ENST00000380075 PDCD6IPQ8WUM4 868 aaKnown RBP21.7■■□□□ 1.07
TRIM54-202ENST00000380075 STMN2Q93045 179 aa21.7■■□□□ 1.07
TRIM54-202ENST00000380075 IGSF8Q969P0 613 aa21.7■■□□□ 1.07
TRIM54-202ENST00000380075 PSMG2Q969U7 264 aa21.7■■□□□ 1.07
TRIM54-202ENST00000380075 ELMO2Q96JJ3 720 aa21.7■■□□□ 1.07
TRIM54-202ENST00000380075 RPRD1AQ96P16 312 aaPredicted RBP21.7■■□□□ 1.07
TRIM54-202ENST00000380075 SEPT5Q99719 369 aaPredicted RBP21.7■■□□□ 1.07
TRIM54-202ENST00000380075 SBK3P0C264 359 aa21.7■■□□□ 1.06
TRIM54-202ENST00000380075 COPAP53621 1224 aa21.7■■□□□ 1.06
TRIM54-202ENST00000380075 ARPP19P56211 112 aa21.7■■□□□ 1.06
TRIM54-202ENST00000380075 SERINC3Q13530 473 aa21.7■■□□□ 1.06
TRIM54-202ENST00000380075 ACSBG2Q5FVE4 666 aa21.7■■□□□ 1.06
TRIM54-202ENST00000380075 SLC39A11Q8N1S5 342 aa21.7■■□□□ 1.06
TRIM54-202ENST00000380075 TSPAN17Q96FV3 270 aa21.7■■□□□ 1.06
TRIM54-202ENST00000380075 FAM161BQ96MY7 647 aa21.7■■□□□ 1.06
TRIM54-202ENST00000380075 MRPL46Q9H2W6 279 aaKnown RBP21.7■■□□□ 1.06
TRIM54-202ENST00000380075 ATXN3LQ9H3M9 355 aa21.7■■□□□ 1.06
TRIM54-202ENST00000380075 ZNF576Q9H609 170 aa21.7■■□□□ 1.06
TRIM54-202ENST00000380075 VTI1BQ9UEU0 232 aa21.7■■□□□ 1.06
TRIM54-202ENST00000380075 RWDD3Q9Y3V2 267 aa21.7■■□□□ 1.06
TRIM54-202ENST00000380075 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.69■■□□□ 1.06
TRIM54-202ENST00000380075 SLC7A4O43246 635 aa21.69■■□□□ 1.06
TRIM54-202ENST00000380075 TBX18O95935 607 aa21.69■■□□□ 1.06
TRIM54-202ENST00000380075 MMP2P08253 660 aa21.69■■□□□ 1.06
TRIM54-202ENST00000380075 GRIA4P48058 902 aa21.69■■□□□ 1.06
TRIM54-202ENST00000380075 ZNF354CQ86Y25 554 aa21.69■■□□□ 1.06
TRIM54-202ENST00000380075 SLC25A41Q8N5S1 370 aa21.69■■□□□ 1.06
TRIM54-202ENST00000380075 GPR152Q8TDT2 470 aa21.69■■□□□ 1.06
TRIM54-202ENST00000380075 PEX13Q92968 403 aa21.69■■□□□ 1.06
TRIM54-202ENST00000380075 ZNF599Q96NL3 588 aa21.69■■□□□ 1.06
TRIM54-202ENST00000380075 MRPL57Q9BQC6 102 aaKnown RBP21.69■■□□□ 1.06
TRIM54-202ENST00000380075 TTLL2Q9BWV7 592 aa21.69■■□□□ 1.06
TRIM54-202ENST00000380075 TTYH1Q9H313 450 aaPredicted RBP21.69■■□□□ 1.06
TRIM54-202ENST00000380075 SPG21Q9NZD8 308 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms