RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 YWHABP31946 246 aaKnown RBP7.54□□□□□ -1.2
CDKL5-201ENST00000379989 FKBP1BP68106 108 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 GPC5P78333 572 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 BFSP1Q12934 665 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 KYAT1Q16773 422 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 FAM160B1Q5W0V3 765 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 ZCCHC23Q6ZST2 131 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 POLNQ7Z5Q5 900 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 DEFB132Q7Z7B7 95 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 MAP4K3Q8IVH8 894 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 SCML4Q8N228 414 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 XXYLT1Q8NBI6 393 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 SLC2A14Q8TDB8 520 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 SLC20A1Q8WUM9 679 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 GTF2H4Q92759 462 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 MARVELD3Q96A59 401 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 DMRTB1Q96MA1 342 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 TSNARE1Q96NA8 513 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 SECISBP2Q96T21 854 aaKnown RBP7.54□□□□□ -1.2
CDKL5-201ENST00000379989 TTYH2Q9BSA4 534 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 NIFKQ9BYG3 293 aaKnown RBP7.54□□□□□ -1.2
CDKL5-201ENST00000379989 RHOBTB2Q9BYZ6 727 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 MUC3BQ9H195 1237 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 DIABLOQ9NR28 239 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 ACOXLQ9NUZ1 547 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 KLF15Q9UIH9 416 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 KCNH4Q9UQ05 1017 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 BCS1LQ9Y276 419 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 COQ4Q9Y3A0 265 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 ACOT8O14734 319 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 TGFB1I1O43294 461 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 GOT2P00505 430 aaKnown RBP7.54□□□□□ -1.2
CDKL5-201ENST00000379989 NTRK1P04629 796 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 ARP10275 920 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 EDNRBP24530 442 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 CDH5P33151 784 aaPredicted RBP7.54□□□□□ -1.2
CDKL5-201ENST00000379989 TALDO1P37837 337 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 YAP1P46937 504 aaKnown RBP7.54□□□□□ -1.2
CDKL5-201ENST00000379989 FMO5P49326 533 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 NDST1P52848 882 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 POU5F1BQ06416 359 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 DMP1Q13316 513 aaPredicted RBP7.54□□□□□ -1.2
CDKL5-201ENST00000379989 NAB1Q13506 487 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 PAGE2BQ5JRK9 111 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 SLCO6A1Q86UG4 719 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 ZNF677Q86XU0 584 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 ERO1BQ86YB8 467 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 CDAN1Q8IWY9 1227 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 COLGALT2Q8IYK4 626 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 CCNYL1Q8N7R7 359 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 ZSCAN18Q8TBC5 510 aaPredicted RBP7.54□□□□□ -1.2
CDKL5-201ENST00000379989 KCTD4Q8WVF5 259 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 MMP19Q99542 508 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 WACQ9BTA9 647 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 BEGAINQ9BUH8 593 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 C2orf40Q9H1Z8 148 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 TMEM134Q9H6X4 195 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 SPON1Q9HCB6 807 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 FBXO8Q9NRD0 319 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 ENOPH1Q9UHY7 261 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 H0YC42 278 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 VNN1O95497 513 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 CLIC3O95833 236 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 HLA-DRAP01903 254 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 ZSCAN5DPP0CG00 497 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 SERPINB5P36952 375 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 NPTX2P47972 431 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 NUDT2P50583 147 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 TPD52P55327 224 aaPredicted RBP7.54□□□□□ -1.2
CDKL5-201ENST00000379989 PPIL2Q13356 520 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 PM20D1Q6GTS8 502 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 HMBOX1Q6NT76 420 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 SLC16A12Q6ZSM3 486 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 THNSL1Q8IYQ7 743 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 IL17RDQ8NFM7 739 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 OR7D4Q8NG98 312 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 LPGAT1Q92604 370 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 SNAPC3Q92966 411 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 USP13Q92995 863 aaPredicted RBP7.54□□□□□ -1.2
CDKL5-201ENST00000379989 FKBP10Q96AY3 582 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 ST6GAL2Q96JF0 529 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 RNF170Q96K19 258 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 BTBD2Q9BX70 525 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 LHPPQ9H008 270 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 TRPV6Q9H1D0 765 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 MROH8Q9H579 483 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 EPS8L2Q9H6S3 715 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 NTN4Q9HB63 628 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 RNF112Q9ULX5 631 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 STYXL1Q9Y6J8 313 aa7.54□□□□□ -1.2
CDKL5-201ENST00000379989 COL11A1P12107 1806 aaPredicted RBP7.54□□□□□ -1.2
CDKL5-201ENST00000379989 TRAV6A0A075B6T7 132 aa7.53□□□□□ -1.2
CDKL5-201ENST00000379989 IGKV6D-21A0A0A0MT36 114 aa7.53□□□□□ -1.2
CDKL5-201ENST00000379989 MAGEB16A2A368 324 aa7.53□□□□□ -1.2
CDKL5-201ENST00000379989 COPEO14579 308 aa7.53□□□□□ -1.2
CDKL5-201ENST00000379989 AIM2O14862 343 aa7.53□□□□□ -1.2
CDKL5-201ENST00000379989 YKT6O15498 198 aa7.53□□□□□ -1.2
CDKL5-201ENST00000379989 PHGDHO43175 533 aaKnown RBP7.53□□□□□ -1.2
CDKL5-201ENST00000379989 DCXO43602 365 aa7.53□□□□□ -1.2
CDKL5-201ENST00000379989 ZBTB14O43829 449 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms