RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 BNIPLQ7Z465 357 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 GOT1L1Q8NHS2 421 aaPredicted RBP10.91□□□□□ -0.66
NEDD9-201ENST00000379433 ACMSDQ8TDX5 336 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 ALKBH8Q96BT7 664 aaKnown RBP10.91□□□□□ -0.66
NEDD9-201ENST00000379433 RMDN1Q96DB5 314 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 LRRC39Q96DD0 335 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 SEMA3CQ99985 751 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 FRMD8Q9BZ67 464 aaPredicted RBP10.91□□□□□ -0.66
NEDD9-201ENST00000379433 SMG9Q9H0W8 520 aaKnown RBP10.91□□□□□ -0.66
NEDD9-201ENST00000379433 KLC4Q9NSK0 619 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.91□□□□□ -0.66
NEDD9-201ENST00000379433 L3MBTL1Q9Y468 752 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 SQORQ9Y6N5 450 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 USH1CQ9Y6N9 552 aa10.91□□□□□ -0.66
NEDD9-201ENST00000379433 ZNF236Q9UL36 1845 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 EIF4E1BA6NMX2 242 aaKnown RBP10.9□□□□□ -0.66
NEDD9-201ENST00000379433 DIAPH2O60879 1101 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 LILRB3O75022 631 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 RPLP2P05387 115 aaKnown RBP10.9□□□□□ -0.66
NEDD9-201ENST00000379433 ENO1P06733 434 aaKnown RBP10.9□□□□□ -0.66
NEDD9-201ENST00000379433 DNAJA1P31689 397 aaKnown RBP10.9□□□□□ -0.66
NEDD9-201ENST00000379433 NCALDP61601 193 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 COG7P83436 770 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 MLLT1Q03111 559 aaPredicted RBP10.9□□□□□ -0.66
NEDD9-201ENST00000379433 STX3Q13277 289 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 ZNF789Q5FWF6 425 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 CYB5D1Q6P9G0 228 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 EFHBQ8N7U6 833 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 RTL3Q8N8U3 475 aaKnown RBP10.9□□□□□ -0.66
NEDD9-201ENST00000379433 ANKLE1Q8NAG6 615 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 ZNF784Q8NCA9 323 aaPredicted RBP10.9□□□□□ -0.66
NEDD9-201ENST00000379433 OR52K2Q8NGK3 314 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 WBP2Q969T9 261 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 ELMO2Q96JJ3 720 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 TLK1Q9UKI8 766 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 SCML2Q9UQR0 700 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 GON4LQ3T8J9 2241 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 AHCYL1O43865 530 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 MT-CO1P00395 513 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 PRSS56P0CW18 603 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 TSPAN8P19075 237 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 GP5P40197 560 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 NEK3P51956 506 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 CTAG1AP78358 180 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 MAP7Q14244 749 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 TPGS1Q6ZTW0 290 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 ATP6V0D2Q8N8Y2 350 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 PPP4R1Q8TF05 950 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 GFM2Q969S9 779 aaKnown RBP10.9□□□□□ -0.66
NEDD9-201ENST00000379433 PGAP3Q96FM1 320 aaPredicted RBP10.9□□□□□ -0.66
NEDD9-201ENST00000379433 VPS39Q96JC1 886 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 HHIPL1Q96JK4 782 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 YME1L1Q96TA2 773 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 NOL6Q9H6R4 1146 aaKnown RBP10.9□□□□□ -0.66
NEDD9-201ENST00000379433 RXFP1Q9HBX9 757 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 ARHGEF38Q9NXL2 777 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 TLR6Q9Y2C9 796 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 DNAJC16Q9Y2G8 782 aa10.9□□□□□ -0.66
NEDD9-201ENST00000379433 ZFP37Q9Y6Q3 630 aaPredicted RBP10.9□□□□□ -0.66
NEDD9-201ENST00000379433 LOC100653049A0A140TA62 436 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 ZCWPW2A0A1B0GU75 182 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 TMEM221A6NGB7 291 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 SLC38A8A6NNN8 435 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 KRT34O76011 436 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 EPN2O95208 641 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 VNN2O95498 520 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 NCF2P19878 526 aaPredicted RBP10.89□□□□□ -0.67
NEDD9-201ENST00000379433 ETV4P43268 484 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 SGSHP51688 502 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 FAM189BP81408 668 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 PEX6Q13608 980 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 IKBKEQ14164 716 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 BRMS1LQ5PSV4 323 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 TXNDC8Q6A555 127 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 C16orf54Q6UWD8 224 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 C4orf22Q6V702 233 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 POU5F2Q8N7G0 328 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 TEX19Q8NA77 164 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 KCTD4Q8WVF5 259 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 SLC22A12Q96S37 553 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 HAPLN3Q96S86 360 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 ZBED2Q9BTP6 218 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 PAPOLBQ9NRJ5 636 aaKnown RBP10.89□□□□□ -0.67
NEDD9-201ENST00000379433 PNPOQ9NVS9 261 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 TMEM238LA0A1B0GVL6 79 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 F5H5T6 163 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 STMND1H3BQB6 276 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 MATN3O15232 486 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 C2P06681 752 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 ITGB8P26012 769 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 SPRP35270 261 aaPredicted RBP10.89□□□□□ -0.67
NEDD9-201ENST00000379433 ATP5C1P36542 298 aaKnown RBP10.89□□□□□ -0.67
NEDD9-201ENST00000379433 HARS2P49590 506 aaKnown RBP10.89□□□□□ -0.67
NEDD9-201ENST00000379433 MRPS35P82673 323 aaKnown RBP10.89□□□□□ -0.67
NEDD9-201ENST00000379433 CDK16Q00536 496 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 GPR17Q13304 367 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 ZC3H12BQ5HYM0 836 aaKnown RBP10.89□□□□□ -0.67
NEDD9-201ENST00000379433 IFT43Q96FT9 208 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 RNF38Q9H0F5 515 aa10.89□□□□□ -0.67
NEDD9-201ENST00000379433 OSBPL2Q9H1P3 480 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms