RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 RARAP10276 462 aa24.9■■□□□ 1.58
TNFRSF4-201ENST00000379236 SERPINB6P35237 376 aa24.9■■□□□ 1.58
TNFRSF4-201ENST00000379236 CSNK1DP48730 415 aa24.9■■□□□ 1.58
TNFRSF4-201ENST00000379236 BCL2L1Q07817 233 aa24.9■■□□□ 1.58
TNFRSF4-201ENST00000379236 ILKQ13418 452 aa24.9■■□□□ 1.58
TNFRSF4-201ENST00000379236 ZNF235Q14590 738 aa24.9■■□□□ 1.58
TNFRSF4-201ENST00000379236 ARHGAP36Q6ZRI8 547 aa24.9■■□□□ 1.58
TNFRSF4-201ENST00000379236 BBS5Q8N3I7 341 aa24.9■■□□□ 1.58
TNFRSF4-201ENST00000379236 SLC25A45Q8N413 288 aa24.9■■□□□ 1.58
TNFRSF4-201ENST00000379236 OR4C6Q8NH72 309 aa24.9■■□□□ 1.58
TNFRSF4-201ENST00000379236 NSMCE1Q8WV22 266 aa24.9■■□□□ 1.58
TNFRSF4-201ENST00000379236 TEKT4Q8WW24 435 aa24.9■■□□□ 1.58
TNFRSF4-201ENST00000379236 VOPP1Q96AW1 172 aa24.9■■□□□ 1.58
TNFRSF4-201ENST00000379236 TSPY26PQ9H489 355 aa24.9■■□□□ 1.58
TNFRSF4-201ENST00000379236 UCKL1Q9NWZ5 548 aa24.9■■□□□ 1.58
TNFRSF4-201ENST00000379236 SEPT3Q9UH03 358 aa24.9■■□□□ 1.58
TNFRSF4-201ENST00000379236 JUPP14923 745 aa24.89■■□□□ 1.58
TNFRSF4-201ENST00000379236 TCF4P15884 667 aa24.89■■□□□ 1.58
TNFRSF4-201ENST00000379236 ITIH2P19823 946 aa24.89■■□□□ 1.58
TNFRSF4-201ENST00000379236 AMPD1P23109 780 aa24.89■■□□□ 1.58
TNFRSF4-201ENST00000379236 FZD2Q14332 565 aa24.89■■□□□ 1.58
TNFRSF4-201ENST00000379236 LBRQ14739 615 aaKnown RBP24.89■■□□□ 1.58
TNFRSF4-201ENST00000379236 UGP2Q16851 508 aa24.89■■□□□ 1.58
TNFRSF4-201ENST00000379236 TMEM52BQ4KMG9 183 aa24.89■■□□□ 1.58
TNFRSF4-201ENST00000379236 TMCO4Q5TGY1 634 aa24.89■■□□□ 1.58
TNFRSF4-201ENST00000379236 SPECC1LQ69YQ0 1117 aa24.89■■□□□ 1.58
TNFRSF4-201ENST00000379236 POLNQ7Z5Q5 900 aa24.89■■□□□ 1.58
TNFRSF4-201ENST00000379236 CAMK1DQ8IU85 385 aa24.89■■□□□ 1.58
TNFRSF4-201ENST00000379236 ZNF564Q8TBZ8 553 aaPredicted RBP24.89■■□□□ 1.58
TNFRSF4-201ENST00000379236 CTNNBL1Q8WYA6 563 aaPredicted RBP24.89■■□□□ 1.58
TNFRSF4-201ENST00000379236 TSC1Q92574 1164 aa24.89■■□□□ 1.58
TNFRSF4-201ENST00000379236 ZNF599Q96NL3 588 aa24.89■■□□□ 1.58
TNFRSF4-201ENST00000379236 CSPG4P5Q96PW8 444 aa24.89■■□□□ 1.58
TNFRSF4-201ENST00000379236 PCDH12Q9NPG4 1184 aa24.89■■□□□ 1.58
TNFRSF4-201ENST00000379236 GPR27Q9NS67 375 aa24.89■■□□□ 1.58
TNFRSF4-201ENST00000379236 CTTNBP2NLQ9P2B4 639 aa24.89■■□□□ 1.58
TNFRSF4-201ENST00000379236 TSPAN11A1L157 253 aa24.88■■□□□ 1.57
TNFRSF4-201ENST00000379236 CSF2P04141 144 aa24.88■■□□□ 1.57
TNFRSF4-201ENST00000379236 GJC1P36383 396 aa24.88■■□□□ 1.57
TNFRSF4-201ENST00000379236 EIF4A3P38919 411 aaKnown RBP24.88■■□□□ 1.57
TNFRSF4-201ENST00000379236 SCNN1BP51168 640 aa24.88■■□□□ 1.57
TNFRSF4-201ENST00000379236 CDH6P55285 790 aa24.88■■□□□ 1.57
TNFRSF4-201ENST00000379236 PROX2Q3B8N5 592 aa24.88■■□□□ 1.57
TNFRSF4-201ENST00000379236 ATPAF2Q8N5M1 289 aa24.88■■□□□ 1.57
TNFRSF4-201ENST00000379236 BTN2A2Q8WVV5 523 aa24.88■■□□□ 1.57
TNFRSF4-201ENST00000379236 DUSP23Q9BVJ7 150 aa24.88■■□□□ 1.57
TNFRSF4-201ENST00000379236 NLGN3Q9NZ94 848 aa24.88■■□□□ 1.57
TNFRSF4-201ENST00000379236 SRRM3A6NNA2 597 aaPredicted RBP24.87■■□□□ 1.57
TNFRSF4-201ENST00000379236 TRIM38O00635 465 aa24.87■■□□□ 1.57
TNFRSF4-201ENST00000379236 TOR1BO14657 336 aa24.87■■□□□ 1.57
TNFRSF4-201ENST00000379236 LZTS3O60299 673 aaPredicted RBP24.87■■□□□ 1.57
TNFRSF4-201ENST00000379236 NME1P15531 152 aaKnown RBP24.87■■□□□ 1.57
TNFRSF4-201ENST00000379236 JUNDP17535 347 aa24.87■■□□□ 1.57
TNFRSF4-201ENST00000379236 ACP1P24666 158 aa24.87■■□□□ 1.57
TNFRSF4-201ENST00000379236 IGFALSP35858 605 aa24.87■■□□□ 1.57
TNFRSF4-201ENST00000379236 RGRP47804 291 aa24.87■■□□□ 1.57
TNFRSF4-201ENST00000379236 PFN3P60673 137 aa24.87■■□□□ 1.57
TNFRSF4-201ENST00000379236 YPEL5P62699 121 aa24.87■■□□□ 1.57
TNFRSF4-201ENST00000379236 POLR2LP62875 67 aaKnown RBP24.87■■□□□ 1.57
TNFRSF4-201ENST00000379236 NSUN2Q08J23 767 aaKnown RBP eCLIP24.87■■□□□ 1.57
TNFRSF4-201ENST00000379236 MARCH9Q86YJ5 346 aa24.87■■□□□ 1.57
TNFRSF4-201ENST00000379236 CENPTQ96BT3 561 aa24.87■■□□□ 1.57
TNFRSF4-201ENST00000379236 PCDH18Q9HCL0 1135 aa24.87■■□□□ 1.57
TNFRSF4-201ENST00000379236 ATP8A1Q9Y2Q0 1164 aa24.87■■□□□ 1.57
TNFRSF4-201ENST00000379236 COQ6Q9Y2Z9 468 aa24.87■■□□□ 1.57
TNFRSF4-201ENST00000379236 RIOK3O14730 519 aaKnown RBP24.86■■□□□ 1.57
TNFRSF4-201ENST00000379236 BUB1BO60566 1050 aaPredicted RBP24.86■■□□□ 1.57
TNFRSF4-201ENST00000379236 H2AFZP0C0S5 128 aa24.86■■□□□ 1.57
TNFRSF4-201ENST00000379236 AP1S1P61966 158 aa24.86■■□□□ 1.57
TNFRSF4-201ENST00000379236 SLC25A11Q02978 314 aaKnown RBP24.86■■□□□ 1.57
TNFRSF4-201ENST00000379236 LRRC14Q15048 493 aa24.86■■□□□ 1.57
TNFRSF4-201ENST00000379236 HES3Q5TGS1 186 aa24.86■■□□□ 1.57
TNFRSF4-201ENST00000379236 H2AFVQ71UI9 128 aa24.86■■□□□ 1.57
TNFRSF4-201ENST00000379236 PDCD7Q8N8D1 485 aaKnown RBP24.86■■□□□ 1.57
TNFRSF4-201ENST00000379236 ZNF548Q8NEK5 533 aaPredicted RBP24.86■■□□□ 1.57
TNFRSF4-201ENST00000379236 OR8K1Q8NGG5 319 aa24.86■■□□□ 1.57
TNFRSF4-201ENST00000379236 PSKH2Q96QS6 385 aa24.86■■□□□ 1.57
TNFRSF4-201ENST00000379236 LCMT1Q9UIC8 334 aa24.86■■□□□ 1.57
TNFRSF4-201ENST00000379236 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP24.85■■□□□ 1.57
TNFRSF4-201ENST00000379236 SCAMP1O15126 338 aa24.85■■□□□ 1.57
TNFRSF4-201ENST00000379236 C6P13671 934 aa24.85■■□□□ 1.57
TNFRSF4-201ENST00000379236 HNRNPH3P31942 346 aaKnown RBP24.85■■□□□ 1.57
TNFRSF4-201ENST00000379236 HSPA9P38646 679 aaKnown RBP24.85■■□□□ 1.57
TNFRSF4-201ENST00000379236 LIG3P49916 1009 aa24.85■■□□□ 1.57
TNFRSF4-201ENST00000379236 DUSP3P51452 185 aaPredicted RBP24.85■■□□□ 1.57
TNFRSF4-201ENST00000379236 IRF4Q15306 451 aa24.85■■□□□ 1.57
TNFRSF4-201ENST00000379236 SLC18A3Q16572 532 aa24.85■■□□□ 1.57
TNFRSF4-201ENST00000379236 ZFYVE27Q5T4F4 411 aa24.85■■□□□ 1.57
TNFRSF4-201ENST00000379236 TXNRD3NBQ6F5E7 133 aa24.85■■□□□ 1.57
TNFRSF4-201ENST00000379236 PROSER1Q86XN7 944 aa24.85■■□□□ 1.57
TNFRSF4-201ENST00000379236 TP53I13Q8NBR0 393 aaPredicted RBP24.85■■□□□ 1.57
TNFRSF4-201ENST00000379236 MDM1Q8TC05 714 aa24.85■■□□□ 1.57
TNFRSF4-201ENST00000379236 LMX1AQ8TE12 382 aa24.85■■□□□ 1.57
TNFRSF4-201ENST00000379236 ETNK2Q9NVF9 386 aa24.85■■□□□ 1.57
TNFRSF4-201ENST00000379236 RCOR3Q9P2K3 495 aaPredicted RBP24.85■■□□□ 1.57
TNFRSF4-201ENST00000379236 UVRAGQ9P2Y5 699 aa24.85■■□□□ 1.57
TNFRSF4-201ENST00000379236 SPASTQ9UBP0 616 aa24.85■■□□□ 1.57
TNFRSF4-201ENST00000379236 APOBEC3BQ9UH17 382 aaKnown RBP24.85■■□□□ 1.57
TNFRSF4-201ENST00000379236 TRABD2BA6NFA1 517 aa24.84■■□□□ 1.57
TNFRSF4-201ENST00000379236 AQP9O43315 295 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms