RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 A0A1W2PRU2 124 aa19.6■□□□□ 0.73
SSU72-204ENST00000378726 CCL16O15467 120 aa19.6■□□□□ 0.73
SSU72-204ENST00000378726 TBL1XO60907 577 aa19.6■□□□□ 0.73
SSU72-204ENST00000378726 PDHA1P08559 390 aa19.6■□□□□ 0.73
SSU72-204ENST00000378726 MYL4P12829 197 aa19.6■□□□□ 0.73
SSU72-204ENST00000378726 SPRP35270 261 aaPredicted RBP19.6■□□□□ 0.73
SSU72-204ENST00000378726 SERPINH1P50454 418 aaKnown RBP19.6■□□□□ 0.73
SSU72-204ENST00000378726 RINLQ6ZS11 566 aa19.6■□□□□ 0.73
SSU72-204ENST00000378726 ACE2Q9BYF1 805 aaPredicted RBP19.6■□□□□ 0.73
SSU72-204ENST00000378726 UBA2Q9UBT2 640 aaPredicted RBP19.6■□□□□ 0.73
SSU72-204ENST00000378726 LMNAP02545 664 aaKnown RBP19.59■□□□□ 0.73
SSU72-204ENST00000378726 ALDOAP04075 364 aaKnown RBP19.59■□□□□ 0.73
SSU72-204ENST00000378726 SESN3P58005 492 aa19.59■□□□□ 0.73
SSU72-204ENST00000378726 CXorf57Q6NSI4 855 aaKnown RBP19.59■□□□□ 0.73
SSU72-204ENST00000378726 Q6ZNB5 142 aa19.59■□□□□ 0.73
SSU72-204ENST00000378726 DNAJC9Q8WXX5 260 aa19.59■□□□□ 0.73
SSU72-204ENST00000378726 RBBP8Q99708 897 aa19.59■□□□□ 0.73
SSU72-204ENST00000378726 LBHD1Q9BQE6 289 aaPredicted RBP19.59■□□□□ 0.73
SSU72-204ENST00000378726 MUC3BQ9H195 1237 aa19.59■□□□□ 0.73
SSU72-204ENST00000378726 MRM3Q9HC36 420 aaKnown RBP19.59■□□□□ 0.73
SSU72-204ENST00000378726 SEPT3Q9UH03 358 aa19.59■□□□□ 0.73
SSU72-204ENST00000378726 LOC285095A0A1B0GVY8 99 aa19.59■□□□□ 0.73
SSU72-204ENST00000378726 H0Y626 953 aa19.59■□□□□ 0.73
SSU72-204ENST00000378726 CBX4O00257 560 aa19.59■□□□□ 0.73
SSU72-204ENST00000378726 VAPBO95292 243 aa19.59■□□□□ 0.73
SSU72-204ENST00000378726 C1RP00736 705 aa19.59■□□□□ 0.73
SSU72-204ENST00000378726 F7P08709 466 aaPredicted RBP19.59■□□□□ 0.73
SSU72-204ENST00000378726 DLDP09622 509 aaKnown RBP19.59■□□□□ 0.73
SSU72-204ENST00000378726 CRHR1P34998 444 aa19.59■□□□□ 0.73
SSU72-204ENST00000378726 ZBTB16Q05516 673 aa19.59■□□□□ 0.73
SSU72-204ENST00000378726 SEPT6Q14141 434 aa19.59■□□□□ 0.73
SSU72-204ENST00000378726 KPNB1Q14974 876 aaKnown RBP19.59■□□□□ 0.73
SSU72-204ENST00000378726 CNGA3Q16281 694 aa19.59■□□□□ 0.73
SSU72-204ENST00000378726 CMPK2Q5EBM0 449 aa19.59■□□□□ 0.73
SSU72-204ENST00000378726 CARNMT1Q8N4J0 409 aa19.59■□□□□ 0.73
SSU72-204ENST00000378726 C17orf80Q9BSJ5 609 aa19.59■□□□□ 0.73
SSU72-204ENST00000378726 MKS1Q9NXB0 559 aa19.59■□□□□ 0.73
SSU72-204ENST00000378726 SLC2A6Q9UGQ3 507 aa19.59■□□□□ 0.73
SSU72-204ENST00000378726 LSM7Q9UK45 103 aaKnown RBP19.59■□□□□ 0.73
SSU72-204ENST00000378726 MTO1Q9Y2Z2 717 aaKnown RBP19.59■□□□□ 0.73
SSU72-204ENST00000378726 DPPA5A6NC42 116 aa19.58■□□□□ 0.73
SSU72-204ENST00000378726 NRG2O14511 850 aaPredicted RBP19.58■□□□□ 0.73
SSU72-204ENST00000378726 TPP1O14773 563 aa19.58■□□□□ 0.73
SSU72-204ENST00000378726 GYG2O15488 501 aa19.58■□□□□ 0.73
SSU72-204ENST00000378726 DNAJC6O75061 913 aa19.58■□□□□ 0.73
SSU72-204ENST00000378726 NEFHP12036 1026 aa19.58■□□□□ 0.73
SSU72-204ENST00000378726 SLC7A9P82251 487 aa19.58■□□□□ 0.73
SSU72-204ENST00000378726 ACSBG2Q5FVE4 666 aa19.58■□□□□ 0.73
SSU72-204ENST00000378726 FSCBQ5H9T9 825 aa19.58■□□□□ 0.73
SSU72-204ENST00000378726 PPM1LQ5SGD2 360 aa19.58■□□□□ 0.73
SSU72-204ENST00000378726 TTC7BQ86TV6 843 aa19.58■□□□□ 0.73
SSU72-204ENST00000378726 ACMSDQ8TDX5 336 aa19.58■□□□□ 0.73
SSU72-204ENST00000378726 PSKH2Q96QS6 385 aa19.58■□□□□ 0.73
SSU72-204ENST00000378726 TUBB6Q9BUF5 446 aa19.58■□□□□ 0.73
SSU72-204ENST00000378726 CINPQ9BW66 212 aaPredicted RBP19.58■□□□□ 0.73
SSU72-204ENST00000378726 PLXNA4Q9HCM2 1894 aa19.58■□□□□ 0.73
SSU72-204ENST00000378726 ASAH2Q9NR71 780 aa19.58■□□□□ 0.73
SSU72-204ENST00000378726 TLR9Q9NR96 1032 aa19.58■□□□□ 0.73
SSU72-204ENST00000378726 LINC01553A4QN01 128 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 KRT36O76013 467 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 ACADSP16219 412 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 CLCN4P51793 760 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 MSLNQ13421 630 aaPredicted RBP19.57■□□□□ 0.72
SSU72-204ENST00000378726 C11orf91Q3C1V1 193 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 SIRPB2Q5JXA9 342 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 STXBP5Q5T5C0 1151 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 FSTL4Q6MZW2 842 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 LMNTD2Q8IXW0 634 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 ATP2A3Q93084 1043 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 IFT43Q96FT9 208 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 ATXN7L3BQ96GX2 97 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 GCNAQ96QF7 691 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 SLC46A2Q9BY10 475 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 NMRK1Q9NWW6 199 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 TRAV19A0A0A6YYK7 116 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 HEATR9A2RTY3 570 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 TYW5A2RUC4 315 aaKnown RBP19.57■□□□□ 0.72
SSU72-204ENST00000378726 TGDSO95455 350 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 TYK2P29597 1187 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 ARCN1P48444 511 aaKnown RBP19.57■□□□□ 0.72
SSU72-204ENST00000378726 CDK18Q07002 472 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 PDE1CQ14123 709 aaPredicted RBP19.57■□□□□ 0.72
SSU72-204ENST00000378726 RFTN1Q14699 578 aaPredicted RBP19.57■□□□□ 0.72
SSU72-204ENST00000378726 RCN1Q15293 331 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 HTR3DQ70Z44 454 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 SPRED2Q7Z698 418 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 DCLK2Q8N568 766 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 HJURPQ8NCD3 748 aaPredicted RBP19.57■□□□□ 0.72
SSU72-204ENST00000378726 NRG4Q8WWG1 115 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 BHMTQ93088 406 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 MGME1Q9BQP7 344 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 PRKD2Q9BZL6 878 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 TREX1Q9NSU2 369 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 HCFC1R1Q9NWW0 138 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 CFAP97Q9P2B7 532 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 SH3BP1Q9Y3L3 701 aa19.57■□□□□ 0.72
SSU72-204ENST00000378726 GFRA2O00451 464 aa19.56■□□□□ 0.72
SSU72-204ENST00000378726 SERPINF2P08697 491 aa19.56■□□□□ 0.72
SSU72-204ENST00000378726 PEX19P40855 299 aa19.56■□□□□ 0.72
SSU72-204ENST00000378726 LIMK2P53671 638 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms