RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 DDX18Q9NVP1 670 aaKnown RBP15.13■□□□□ 0.01
NPHP4-201ENST00000378156 SH3BP4Q9P0V3 963 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 KLHL3Q9UH77 587 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 RPL26L1Q9UNX3 145 aaKnown RBP15.13■□□□□ 0.01
NPHP4-201ENST00000378156 TNPO3Q9Y5L0 923 aaKnown RBP15.13■□□□□ 0.01
NPHP4-201ENST00000378156 SEC22BO75396 215 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 ANPEPP15144 967 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 ATP6V1B2P21281 511 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 CLCNKBP51801 687 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 PFKFB4Q16877 469 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 GRIN3AQ8TCU5 1115 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 DLG3Q92796 817 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 GINS4Q9BRT9 223 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 SEMA6AQ9H2E6 1030 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 HMG20AQ9NP66 347 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 TMCC3Q9ULS5 477 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 CLUHO75153 1309 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 RGPD5Q99666 1765 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 PIRTP0C851 137 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 TALDO1P37837 337 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 C1DQ13901 141 aaKnown RBP15.12■□□□□ 0.01
NPHP4-201ENST00000378156 CRY1Q16526 586 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 SLC39A4Q6P5W5 647 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 RD3Q7Z3Z2 195 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 TTC7BQ86TV6 843 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 DHFR2Q86XF0 187 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 FAM126BQ8IXS8 530 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 MIER2Q8N344 545 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 NDNQ99608 321 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 SEPHS2Q99611 448 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 NDEL1Q9GZM8 345 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 CAPN10Q9HC96 672 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 WDR4P57081 412 aaKnown RBP15.12■□□□□ 0.01
NPHP4-201ENST00000378156 DGUOKQ16854 277 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 RINLQ6ZS11 566 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 BHLHE22Q8NFJ8 381 aaPredicted RBP15.12■□□□□ 0.01
NPHP4-201ENST00000378156 SNX27Q96L92 541 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 FANCEQ9HB96 536 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 ZMYM5Q9UJ78 669 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 INPP4BO15327 924 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 CATP04040 527 aaKnown RBP15.12■□□□□ 0.01
NPHP4-201ENST00000378156 TYMPP19971 482 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 ATP5F1P24539 256 aaPredicted RBP15.12■□□□□ 0.01
NPHP4-201ENST00000378156 TTPAP49638 278 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 NRLP54845 237 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 TGM3Q08188 693 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 HSPA14Q0VDF9 509 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 TRIM25Q14258 630 aaKnown RBP15.12■□□□□ 0.01
NPHP4-201ENST00000378156 PTPRNQ16849 979 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 SH3PXD2AQ5TCZ1 1133 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 FAM45BPQ6NSW5 357 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 DRICH1Q6PGQ1 229 aaPredicted RBP15.12■□□□□ 0.01
NPHP4-201ENST00000378156 TDRPQ86YL5 185 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 SETD9Q8NE22 299 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 FAM45AQ8TCE6 357 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 BRI3BPQ8WY22 251 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 COMMD8Q9NX08 183 aa15.12■□□□□ 0.01
NPHP4-201ENST00000378156 ZNF536O15090 1300 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 A0A1W2PQH9 124 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 MSI1O43347 362 aaKnown RBP15.11■□□□□ 0.01
NPHP4-201ENST00000378156 CXCL14O95715 111 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 IFNA14P01570 189 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 ATP6V1C1P21283 382 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 TPP2P29144 1249 aaPredicted RBP15.11■□□□□ 0.01
NPHP4-201ENST00000378156 FAM98BQ52LJ0 330 aaKnown RBP15.11■□□□□ 0.01
NPHP4-201ENST00000378156 INTS6LQ5JSJ4 861 aaKnown RBP15.11■□□□□ 0.01
NPHP4-201ENST00000378156 CERCAMQ5T4B2 595 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 METTL3Q86U44 580 aaKnown RBP15.11■□□□□ 0.01
NPHP4-201ENST00000378156 WDR60Q8WVS4 1066 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 BTN2A3PQ96KV6 586 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 FBXL18Q96ME1 805 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 SMIM31A0A1B0GVY4 71 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 H0YGN5 161 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 HDAC3O15379 428 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 TMEM63AO94886 807 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 ZNF682O95780 498 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 ST13P50502 369 aaKnown RBP15.11■□□□□ 0.01
NPHP4-201ENST00000378156 CES5AQ6NT32 575 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 TRAPPC5Q8IUR0 188 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 GSTCDQ8NEC7 633 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 ST13P5Q8NFI4 369 aaPredicted RBP15.11■□□□□ 0.01
NPHP4-201ENST00000378156 BORCS6Q96GS4 357 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 HNRNPABQ99729 332 aaKnown RBP15.11■□□□□ 0.01
NPHP4-201ENST00000378156 TRIM8Q9BZR9 551 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 AGO1Q9UL18 857 aaKnown RBP15.11■□□□□ 0.01
NPHP4-201ENST00000378156 CHKBQ9Y259 395 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 NFS1Q9Y697 457 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 MFSD11O43934 449 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 VPS4BO75351 444 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 GABRR2P28476 465 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 GLUD2P49448 558 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 TEX44Q53QW1 395 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 CSGALNACT1Q8TDX6 532 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 SLC25A23Q9BV35 468 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 PRRG3Q9BZD7 231 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 MCM8Q9UJA3 840 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 PADI4Q9UM07 663 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 COMMD3-BMI1R4GMX3 469 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 PSMD12O00232 456 aaPredicted RBP15.11■□□□□ 0.01
NPHP4-201ENST00000378156 LDLRP01130 860 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms