RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 NR5A2O00482 541 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 CRHR1P34998 444 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 MPP5Q8N3R9 675 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 ZIC5Q96T25 663 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 SAR1AQ9NR31 198 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 GJD2Q9UKL4 321 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 MC4RP32245 332 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 KCNQ1P51787 676 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 ESRRGP62508 458 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 SATB1Q01826 763 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 HIST2H2ACQ16777 129 aaPredicted RBP14.61□□□□□ -0.07
TCOF1-202ENST00000377797 RNF43Q68DV7 783 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 HIST2H2AA3Q6FI13 130 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 DSG4Q86SJ6 1040 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 LDB1Q86U70 411 aaPredicted RBP14.61□□□□□ -0.07
TCOF1-202ENST00000377797 OR56A4Q8NGH8 313 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 PTCD2Q8WV60 388 aaKnown RBP14.61□□□□□ -0.07
TCOF1-202ENST00000377797 GPR62Q9BZJ7 368 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 TLE6Q9H808 572 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 EVLQ9UI08 416 aaPredicted RBP14.61□□□□□ -0.07
TCOF1-202ENST00000377797 MSRAQ9UJ68 235 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 HS3ST4Q9Y661 456 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 SHOX2O60902 331 aaPredicted RBP14.6□□□□□ -0.07
TCOF1-202ENST00000377797 LYPLA1O75608 230 aaPredicted RBP14.6□□□□□ -0.07
TCOF1-202ENST00000377797 VEGFBP49765 207 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 PHEXP78562 749 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 GRM3Q14832 879 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 STARD3Q14849 445 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 RAB6CQ53S08 254 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 RNF217Q8TC41 542 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 ZNF398Q8TD17 642 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 HERPUD2Q9BSE4 406 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 BTBD10Q9BSF8 475 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 RAB6CQ9H0N0 254 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 HAS3O00219 553 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 CAPN15O75808 1086 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 ITGBL1O95965 494 aaPredicted RBP14.6□□□□□ -0.07
TCOF1-202ENST00000377797 LIMK2P53671 638 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 MSS51Q4VC12 460 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 CES5AQ6NT32 575 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 SERPINA13PQ6UXR4 307 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 YTHDF3Q7Z739 585 aaKnown RBP14.6□□□□□ -0.07
TCOF1-202ENST00000377797 ST13P4Q8IZP2 240 aaPredicted RBP14.6□□□□□ -0.07
TCOF1-202ENST00000377797 EME1Q96AY2 570 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 PLD4Q96BZ4 506 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 OSGEPL1Q9H4B0 414 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 SEMA4BQ9NPR2 832 aaPredicted RBP14.6□□□□□ -0.07
TCOF1-202ENST00000377797 ECM29Q5VYK3 1845 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 MPP1Q00013 466 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 PFKPQ01813 784 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 PAFAH1B3Q15102 231 aaKnown RBP14.6□□□□□ -0.07
TCOF1-202ENST00000377797 GPRIN1Q7Z2K8 1008 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 TRMT11Q7Z4G4 463 aaKnown RBP14.6□□□□□ -0.07
TCOF1-202ENST00000377797 C7orf61Q8IZ16 206 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 TBC1D19Q8N5T2 526 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 TRIML2Q8N7C3 387 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 KYQ8NBH2 561 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 MCOLN3Q8TDD5 553 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 PIK3R5Q8WYR1 880 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 SMG7Q92540 1137 aaKnown RBP14.6□□□□□ -0.07
TCOF1-202ENST00000377797 FCRL5Q96RD9 977 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 HGH1Q9BTY7 390 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 THUMPD3Q9BV44 507 aaKnown RBP14.6□□□□□ -0.07
TCOF1-202ENST00000377797 RUBCNLQ9H714 662 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 H3BMM5 538 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 TSPAN8P19075 237 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 KCNJ11Q14654 390 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 AZIN2Q96A70 460 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 RBBP8Q99708 897 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 OSBPL1AQ9BXW6 950 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 ZCWPW1Q9H0M4 648 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 SPASTQ9UBP0 616 aa14.6□□□□□ -0.07
TCOF1-202ENST00000377797 BAIAP3O94812 1187 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 SKIV2L2P42285 1042 aaKnown RBP14.59□□□□□ -0.07
TCOF1-202ENST00000377797 FUT11Q495W5 492 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 SETMARQ53H47 684 aaPredicted RBP14.59□□□□□ -0.07
TCOF1-202ENST00000377797 VPS37AQ8NEZ2 397 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 ECSITQ9BQ95 431 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 ZCCHC2Q9C0B9 1178 aaKnown RBP14.59□□□□□ -0.07
TCOF1-202ENST00000377797 KRT6AP02538 564 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 KRT6BP04259 564 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 DGKAP23743 735 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 KRT6CP48668 564 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 CYP4F8P98187 520 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 SLC10A7Q0GE19 358 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 PTK2BQ14289 1009 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 FSTL4Q6MZW2 842 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 FAM151BQ6UXP7 276 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 SNX32Q86XE0 403 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 ZNF461Q8TAF7 563 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 MYO19Q96H55 970 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 SERAC1Q96JX3 654 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 MAN1C1Q9NR34 630 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 CCDC167Q9P0B6 97 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 STK39Q9UEW8 545 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 TCEA3O75764 348 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 LIPMQ5VYY2 423 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 AGAP2Q99490 1192 aa14.59□□□□□ -0.07
TCOF1-202ENST00000377797 FAM126AQ9BYI3 521 aaPredicted RBP14.59□□□□□ -0.07
TCOF1-202ENST00000377797 HDAC3O15379 428 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms