RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 MAML3Q96JK9 1138 aa19.12■□□□□ 0.65
TBC1D4-201ENST00000377625 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.12■□□□□ 0.653e-6■■□□□ 12
TBC1D4-201ENST00000377625 NCANO14594 1321 aa19.12■□□□□ 0.65
TBC1D4-201ENST00000377625 LRRC10BA6NIK2 292 aa19.12■□□□□ 0.65
TBC1D4-201ENST00000377625 TEX28O15482 410 aa19.12■□□□□ 0.65
TBC1D4-201ENST00000377625 TSHRP16473 764 aa19.12■□□□□ 0.65
TBC1D4-201ENST00000377625 PAX3P23760 479 aa19.12■□□□□ 0.65
TBC1D4-201ENST00000377625 RPL4P36578 427 aaKnown RBP19.12■□□□□ 0.65
TBC1D4-201ENST00000377625 USP46P62068 366 aa19.12■□□□□ 0.65
TBC1D4-201ENST00000377625 AUHQ13825 339 aaKnown RBP19.12■□□□□ 0.65
TBC1D4-201ENST00000377625 PSMD5Q16401 504 aa19.12■□□□□ 0.65
TBC1D4-201ENST00000377625 DCLRE1AQ6PJP8 1040 aa19.12■□□□□ 0.65
TBC1D4-201ENST00000377625 LRRN4Q8WUT4 740 aa19.12■□□□□ 0.65
TBC1D4-201ENST00000377625 BRD9Q9H8M2 597 aa19.12■□□□□ 0.65
TBC1D4-201ENST00000377625 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 ISM1B1AKI9 464 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 CLDN5O00501 218 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 HGFP14210 728 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 ITGA2P17301 1181 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 CRYBB1P53674 252 aaPredicted RBP19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 RHAGQ02094 409 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 MAP2K5Q13163 448 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 CCNIQ14094 377 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 PRR23CQ6ZRP0 262 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 KRT74Q7RTS7 529 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 OR5B17Q8NGF7 314 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 VPS4AQ9UN37 437 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 PTCH2Q9Y6C5 1203 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 ATXN2Q99700 1313 aaKnown RBP19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 POLR1BQ9H9Y6 1135 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 MFN2O95140 757 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 ERCC2P18074 760 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 MRPS5P82675 430 aaKnown RBP19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 RGS1Q08116 209 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 TTMPQ5BVD1 217 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 TTC23Q5W5X9 447 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 EHD3Q9NZN3 535 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 GMPPBQ9Y5P6 360 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 ACTL7BQ9Y614 415 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 ZNF37AP17032 561 aaPredicted RBP19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 ZIK1Q3SY52 487 aaPredicted RBP19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 IRGCQ6NXR0 463 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 FBXW8Q8N3Y1 598 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 PTCD3Q96EY7 689 aaKnown RBP19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 SLC38A2Q96QD8 506 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 RACGAP1Q9H0H5 632 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 TOR4AQ9NXH8 423 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 hCG_1818297A0A087WSY0 165 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 MIIPQ5JXC2 388 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 PEG10Q86TG7 708 aaKnown RBP19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 RASAL3Q86YV0 1011 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 SPATA6LQ8N4H0 392 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 CD101Q93033 1021 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 EBNA1BP2Q99848 306 aaKnown RBP19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 LRRC19Q9H756 370 aa19.11■□□□□ 0.65
TBC1D4-201ENST00000377625 H0Y858 1186 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 ITGA2BP08514 1039 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 EIF2B2P49770 351 aaKnown RBP19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 FAM46CQ5VWP2 391 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 TXNDC11Q6PKC3 985 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 SPESP1Q6UW49 350 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 LRRC55Q6ZSA7 311 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 NET1Q7Z628 596 aaPredicted RBP19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 OR52K2Q8NGK3 314 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 FERD3LQ96RJ6 166 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 ACE2Q9BYF1 805 aaPredicted RBP19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 B4GALT5O43286 388 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 ERN1O75460 977 aaKnown RBP19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 ABHD2P08910 425 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 MATKP42679 507 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 CTBP1Q13363 440 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 PIWIL4Q7Z3Z4 852 aaKnown RBP19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 C12orf29Q8N999 325 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 ACMSDQ8TDX5 336 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 PHF10Q8WUB8 498 aaKnown RBP19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 IKZF3Q9UKT9 509 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 GSAPA4D1B5 854 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 ECDO95905 644 aaPredicted RBP19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 SLC35G4P0C7Q5 338 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 HOXA10P31260 410 aaPredicted RBP19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 SP3Q02447 781 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 KLHL24Q6TFL4 600 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 ARHGAP36Q6ZRI8 547 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 BBS12Q6ZW61 710 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 IKBIPQ70UQ0 350 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 ARCQ7LC44 396 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 SHC3Q92529 594 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 Q96MT0 163 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 HMG20AQ9NP66 347 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 GIT1Q9Y2X7 761 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 SASH3O75995 380 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 KRT33AO76009 404 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 RCVRNP35243 200 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 SRP54P61011 504 aaKnown RBP19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 NOMO3P69849 1222 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 CDK18Q07002 472 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 SPIRE1Q08AE8 756 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 BST1Q10588 318 aa19.1■□□□□ 0.65
TBC1D4-201ENST00000377625 AP5B1Q2VPB7 878 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms