RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 POM121L1PQ3SYA9 428 aa13.28□□□□□ -0.28
TIMP1-202ENST00000377017 GLE1Q53GS7 698 aaKnown RBP13.28□□□□□ -0.28
TIMP1-202ENST00000377017 FAXCQ5TGI0 409 aa13.28□□□□□ -0.28
TIMP1-202ENST00000377017 NAPEPLDQ6IQ20 393 aa13.28□□□□□ -0.28
TIMP1-202ENST00000377017 FBXL19Q6PCT2 694 aa13.28□□□□□ -0.28
TIMP1-202ENST00000377017 KDELC1Q6UW63 502 aa13.28□□□□□ -0.28
TIMP1-202ENST00000377017 ERN2Q76MJ5 926 aaKnown RBP13.28□□□□□ -0.28
TIMP1-202ENST00000377017 PCGF5Q86SE9 256 aa13.28□□□□□ -0.28
TIMP1-202ENST00000377017 PRUNE1Q86TP1 453 aa13.28□□□□□ -0.28
TIMP1-202ENST00000377017 LINC00523Q86TU6 105 aa13.28□□□□□ -0.28
TIMP1-202ENST00000377017 HDDC3Q8N4P3 179 aa13.28□□□□□ -0.28
TIMP1-202ENST00000377017 TAB3Q8N5C8 712 aaPredicted RBP13.28□□□□□ -0.28
TIMP1-202ENST00000377017 MDGA1Q8NFP4 955 aa13.28□□□□□ -0.28
TIMP1-202ENST00000377017 IPMKQ8NFU5 416 aa13.28□□□□□ -0.28
TIMP1-202ENST00000377017 SPOCK2Q92563 424 aa13.28□□□□□ -0.28
TIMP1-202ENST00000377017 RAB7BQ96AH8 199 aa13.28□□□□□ -0.28
TIMP1-202ENST00000377017 ARRDC3Q96B67 414 aa13.28□□□□□ -0.28
TIMP1-202ENST00000377017 ECHDC3Q96DC8 303 aa13.28□□□□□ -0.28
TIMP1-202ENST00000377017 OXNAD1Q96HP4 312 aaPredicted RBP13.28□□□□□ -0.28
TIMP1-202ENST00000377017 FEM1CQ96JP0 617 aa13.28□□□□□ -0.28
TIMP1-202ENST00000377017 HDAC8Q9BY41 377 aa13.28□□□□□ -0.28
TIMP1-202ENST00000377017 ETNK1Q9HBU6 452 aa13.28□□□□□ -0.28
TIMP1-202ENST00000377017 EIF2B3Q9NR50 452 aaKnown RBP13.28□□□□□ -0.28
TIMP1-202ENST00000377017 FBXL12Q9NXK8 326 aa13.28□□□□□ -0.28
TIMP1-202ENST00000377017 UBP1Q9NZI7 540 aa13.28□□□□□ -0.28
TIMP1-202ENST00000377017 FBXO4Q9UKT5 387 aa13.28□□□□□ -0.28
TIMP1-202ENST00000377017 FZD4Q9ULV1 537 aa13.28□□□□□ -0.28
TIMP1-202ENST00000377017 PHTF1Q9UMS5 762 aa13.28□□□□□ -0.28
TIMP1-202ENST00000377017 CHKBQ9Y259 395 aa13.28□□□□□ -0.28
TIMP1-202ENST00000377017 UTP11Q9Y3A2 253 aaKnown RBP13.28□□□□□ -0.28
TIMP1-202ENST00000377017 PCDHB9Q9Y5E1 797 aa13.28□□□□□ -0.28
TIMP1-202ENST00000377017 VCANP13611 3396 aa13.28□□□□□ -0.28
TIMP1-202ENST00000377017 CCDC163A0A0D9SF12 145 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 A0A1W2PP55 124 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 UPK3BL1B0FP48 263 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 UPK3BL2E5RIL1 263 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 K7ESF4 209 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 AXIN1O15169 862 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 RAD51CO43502 376 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 RNASEH2AO75792 299 aaKnown RBP13.27□□□□□ -0.29
TIMP1-202ENST00000377017 AP2A1O95782 977 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 NDST3O95803 873 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 APRTP07741 180 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 HLA-DPA1P20036 260 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 OXTRP30559 389 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 GRIA4P48058 902 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 SARNPP82979 210 aaKnown RBP13.27□□□□□ -0.29
TIMP1-202ENST00000377017 CDK16Q00536 496 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 ELP6Q0PNE2 266 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 FAM182AQ5T1J6 154 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 ERAP2Q6P179 960 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 PARS2Q7L3T8 475 aaKnown RBP13.27□□□□□ -0.29
TIMP1-202ENST00000377017 TTC7BQ86TV6 843 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 KLHDC8BQ8IXV7 354 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 PDCD7Q8N8D1 485 aaKnown RBP13.27□□□□□ -0.29
TIMP1-202ENST00000377017 BBOF1Q8ND07 529 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 LPCAT1Q8NF37 534 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 RMDN1Q96DB5 314 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 SPACA7Q96KW9 195 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 MRGPRX2Q96LB1 330 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 SRPK1Q96SB4 655 aaKnown RBP13.27□□□□□ -0.29
TIMP1-202ENST00000377017 TBL1YQ9BQ87 522 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 TRIM51Q9BSJ1 452 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 MLPHQ9BV36 600 aaPredicted RBP13.27□□□□□ -0.29
TIMP1-202ENST00000377017 FICDQ9BVA6 458 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 SLC6A17Q9H1V8 727 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 C11orf16Q9NQ32 467 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 KMT2EQ8IZD2 1858 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 ZDBF2Q9HCK1 2354 aa13.27□□□□□ -0.29
TIMP1-202ENST00000377017 EFCAB8A8MWE9 144 aa13.26□□□□□ -0.29
TIMP1-202ENST00000377017 SMAPO00193 183 aa13.26□□□□□ -0.29
TIMP1-202ENST00000377017 AP3B1O00203 1094 aa13.26□□□□□ -0.29
TIMP1-202ENST00000377017 FZD6O60353 706 aa13.26□□□□□ -0.29
TIMP1-202ENST00000377017 FGF1P05230 155 aa13.26□□□□□ -0.29
TIMP1-202ENST00000377017 CYP2A6P11509 494 aaPredicted RBP13.26□□□□□ -0.29
TIMP1-202ENST00000377017 ADRB3P13945 408 aa13.26□□□□□ -0.29
TIMP1-202ENST00000377017 TPSB2P20231 275 aa13.26□□□□□ -0.29
TIMP1-202ENST00000377017 P2RY2P41231 377 aa13.26□□□□□ -0.29
TIMP1-202ENST00000377017 TUBB4BP68371 445 aa13.26□□□□□ -0.29
TIMP1-202ENST00000377017 CSTF1Q05048 431 aaKnown RBP13.26□□□□□ -0.29
TIMP1-202ENST00000377017 CNTN1Q12860 1018 aa13.26□□□□□ -0.29
TIMP1-202ENST00000377017 TPSAB1Q15661 275 aa13.26□□□□□ -0.29
TIMP1-202ENST00000377017 UGP2Q16851 508 aa13.26□□□□□ -0.29
TIMP1-202ENST00000377017 USP39Q53GS9 565 aaKnown RBP13.26□□□□□ -0.29
TIMP1-202ENST00000377017 KCTD11Q693B1 232 aa13.26□□□□□ -0.29
TIMP1-202ENST00000377017 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.26□□□□□ -0.29
TIMP1-202ENST00000377017 PPP1R21Q6ZMI0 780 aa13.26□□□□□ -0.29
TIMP1-202ENST00000377017 USP45Q70EL2 814 aa13.26□□□□□ -0.29
TIMP1-202ENST00000377017 KDELC2Q7Z4H8 507 aa13.26□□□□□ -0.29
TIMP1-202ENST00000377017 AADATQ8N5Z0 425 aa13.26□□□□□ -0.29
TIMP1-202ENST00000377017 SNF8Q96H20 258 aa13.26□□□□□ -0.29
TIMP1-202ENST00000377017 NSMCE3Q96MG7 304 aa13.26□□□□□ -0.29
TIMP1-202ENST00000377017 GORASP1Q9BQQ3 440 aa13.26□□□□□ -0.29
TIMP1-202ENST00000377017 ERP44Q9BS26 406 aa13.26□□□□□ -0.29
TIMP1-202ENST00000377017 FAM126AQ9BYI3 521 aaPredicted RBP13.26□□□□□ -0.29
TIMP1-202ENST00000377017 TPSD1Q9BZJ3 242 aa13.26□□□□□ -0.29
TIMP1-202ENST00000377017 KDM4CQ9H3R0 1056 aa13.26□□□□□ -0.29
TIMP1-202ENST00000377017 SGK2Q9HBY8 427 aa13.26□□□□□ -0.29
TIMP1-202ENST00000377017 ITM2CQ9NQX7 267 aa13.26□□□□□ -0.29
TIMP1-202ENST00000377017 USP36Q9P275 1121 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms