RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 RAP1GDS1P52306 607 aa20.37■□□□□ 0.85
VSX1-202ENST00000376709 COPAP53621 1224 aa20.37■□□□□ 0.85
VSX1-202ENST00000376709 DLG1Q12959 904 aa20.37■□□□□ 0.85
VSX1-202ENST00000376709 MSLNQ13421 630 aaPredicted RBP20.37■□□□□ 0.85
VSX1-202ENST00000376709 ZNF789Q5FWF6 425 aa20.37■□□□□ 0.85
VSX1-202ENST00000376709 ARL13AQ5H913 290 aaPredicted RBP20.37■□□□□ 0.85
VSX1-202ENST00000376709 FSCBQ5H9T9 825 aa20.37■□□□□ 0.85
VSX1-202ENST00000376709 SLC39A5Q6ZMH5 540 aa20.37■□□□□ 0.85
VSX1-202ENST00000376709 TMC7Q7Z402 723 aa20.37■□□□□ 0.85
VSX1-202ENST00000376709 TTLL2Q9BWV7 592 aa20.37■□□□□ 0.85
VSX1-202ENST00000376709 PLA2G4CQ9UP65 541 aa20.37■□□□□ 0.85
VSX1-202ENST00000376709 MROH6A6NGR9 719 aa20.36■□□□□ 0.85
VSX1-202ENST00000376709 DLX3O60479 287 aa20.36■□□□□ 0.85
VSX1-202ENST00000376709 TM7SF2O76062 418 aa20.36■□□□□ 0.85
VSX1-202ENST00000376709 OR1D2P34982 312 aa20.36■□□□□ 0.85
VSX1-202ENST00000376709 CCR10P46092 362 aa20.36■□□□□ 0.85
VSX1-202ENST00000376709 ASPHQ12797 758 aa20.36■□□□□ 0.85
VSX1-202ENST00000376709 TRIM60Q495X7 471 aa20.36■□□□□ 0.85
VSX1-202ENST00000376709 ANKRD33Q7Z3H0 272 aa20.36■□□□□ 0.85
VSX1-202ENST00000376709 MAPK15Q8TD08 544 aa20.36■□□□□ 0.85
VSX1-202ENST00000376709 HEXDCQ8WVB3 486 aa20.36■□□□□ 0.85
VSX1-202ENST00000376709 TADA1Q96BN2 335 aa20.36■□□□□ 0.85
VSX1-202ENST00000376709 CMTM5Q96DZ9 223 aa20.36■□□□□ 0.85
VSX1-202ENST00000376709 MRPL57Q9BQC6 102 aaKnown RBP20.36■□□□□ 0.85
VSX1-202ENST00000376709 LOC285095A0A1B0GVY8 99 aa20.36■□□□□ 0.85
VSX1-202ENST00000376709 CCL22O00626 93 aa20.36■□□□□ 0.85
VSX1-202ENST00000376709 SLC7A4O43246 635 aa20.36■□□□□ 0.85
VSX1-202ENST00000376709 DCXO43602 365 aa20.36■□□□□ 0.85
VSX1-202ENST00000376709 ACSL4O60488 711 aa20.36■□□□□ 0.85
VSX1-202ENST00000376709 CIB2O75838 187 aa20.36■□□□□ 0.85
VSX1-202ENST00000376709 ATXN1LP0C7T5 689 aaKnown RBP20.36■□□□□ 0.85
VSX1-202ENST00000376709 SLC6A4P31645 630 aa20.36■□□□□ 0.85
VSX1-202ENST00000376709 SLC11A2P49281 568 aa20.36■□□□□ 0.85
VSX1-202ENST00000376709 TUFMP49411 452 aaKnown RBP20.36■□□□□ 0.85
VSX1-202ENST00000376709 CLCN5P51795 746 aa20.36■□□□□ 0.85
VSX1-202ENST00000376709 TLE2Q04725 743 aa20.36■□□□□ 0.85
VSX1-202ENST00000376709 PRKAA1Q13131 559 aa20.36■□□□□ 0.85
VSX1-202ENST00000376709 CSHL1Q14406 222 aa20.36■□□□□ 0.85
VSX1-202ENST00000376709 USP41Q3LFD5 358 aa20.36■□□□□ 0.85
VSX1-202ENST00000376709 SEL1L3Q68CR1 1132 aa20.36■□□□□ 0.85
VSX1-202ENST00000376709 CILP2Q8IUL8 1156 aa20.36■□□□□ 0.85
VSX1-202ENST00000376709 ULK2Q8IYT8 1036 aa20.36■□□□□ 0.85
VSX1-202ENST00000376709 HDAC10Q969S8 669 aa20.36■□□□□ 0.85
VSX1-202ENST00000376709 RSRC1Q96IZ7 334 aaKnown RBP20.36■□□□□ 0.85
VSX1-202ENST00000376709 TCF7L2Q9NQB0 619 aa20.36■□□□□ 0.85
VSX1-202ENST00000376709 A0A0D9SEW6 157 aa20.35■□□□□ 0.85
VSX1-202ENST00000376709 MATN2O00339 956 aa20.35■□□□□ 0.85
VSX1-202ENST00000376709 MUSKO15146 869 aa20.35■□□□□ 0.85
VSX1-202ENST00000376709 HDAC3O15379 428 aa20.35■□□□□ 0.85
VSX1-202ENST00000376709 ELF1P32519 619 aa20.35■□□□□ 0.85
VSX1-202ENST00000376709 CCNG1P51959 295 aa20.35■□□□□ 0.85
VSX1-202ENST00000376709 RCN1Q15293 331 aa20.35■□□□□ 0.85
VSX1-202ENST00000376709 CCDC6Q16204 474 aa20.35■□□□□ 0.85
VSX1-202ENST00000376709 FAM83EQ2M2I3 478 aa20.35■□□□□ 0.85
VSX1-202ENST00000376709 C6orf163Q5TEZ5 329 aa20.35■□□□□ 0.85
VSX1-202ENST00000376709 IL31Q6EBC2 164 aa20.35■□□□□ 0.85
VSX1-202ENST00000376709 SLC8B1Q6J4K2 584 aa20.35■□□□□ 0.85
VSX1-202ENST00000376709 KIAA1841Q6NSI8 718 aa20.35■□□□□ 0.85
VSX1-202ENST00000376709 CCNYL1Q8N7R7 359 aa20.35■□□□□ 0.85
VSX1-202ENST00000376709 BLOC1S5Q8TDH9 187 aa20.35■□□□□ 0.85
VSX1-202ENST00000376709 SGF29Q96ES7 293 aa20.35■□□□□ 0.85
VSX1-202ENST00000376709 TSPAN17Q96FV3 270 aa20.35■□□□□ 0.85
VSX1-202ENST00000376709 CLPTM1LQ96KA5 538 aa20.35■□□□□ 0.85
VSX1-202ENST00000376709 OLFM1Q99784 485 aa20.35■□□□□ 0.85
VSX1-202ENST00000376709 SHCBP1LQ9BZQ2 653 aa20.35■□□□□ 0.85
VSX1-202ENST00000376709 ZFP37Q9Y6Q3 630 aaPredicted RBP20.35■□□□□ 0.85
VSX1-202ENST00000376709 HK2P52789 917 aa20.35■□□□□ 0.85
VSX1-202ENST00000376709 RNF135Q8IUD6 432 aa20.35■□□□□ 0.85
VSX1-202ENST00000376709 BBS5Q8N3I7 341 aa20.35■□□□□ 0.85
VSX1-202ENST00000376709 PDZD8Q8NEN9 1154 aa20.35■□□□□ 0.85
VSX1-202ENST00000376709 PPP1R36Q96LQ0 422 aa20.35■□□□□ 0.85
VSX1-202ENST00000376709 LBHD1Q9BQE6 289 aaPredicted RBP20.35■□□□□ 0.85
VSX1-202ENST00000376709 MFSD1Q9H3U5 465 aa20.35■□□□□ 0.85
VSX1-202ENST00000376709 PDFQ9HBH1 243 aa20.35■□□□□ 0.85
VSX1-202ENST00000376709 GPAMQ9HCL2 828 aa20.35■□□□□ 0.85
VSX1-202ENST00000376709 MTRRQ9UBK8 725 aa20.35■□□□□ 0.85
VSX1-202ENST00000376709 GOLGA8QA0A0J9YX86 632 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 GOLGA8OA6NCC3 632 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 GOLGA8NF8WBI6 632 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 NEMP1O14524 444 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 LDB2O43679 373 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 KRT36O76013 467 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 HLA-DPA1P20036 260 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 CPOXP36551 454 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 PTDSS1P48651 473 aaKnown RBP20.34■□□□□ 0.85
VSX1-202ENST00000376709 MNX1P50219 401 aaPredicted RBP20.34■□□□□ 0.85
VSX1-202ENST00000376709 ARSDP51689 593 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 SESN3P58005 492 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 GNA12Q03113 381 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 METTL21CQ5VZV1 264 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 LDB1Q86U70 411 aaPredicted RBP20.34■□□□□ 0.85
VSX1-202ENST00000376709 DENND1CQ8IV53 801 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 PHTF2Q8N3S3 785 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 PNPLA1Q8N8W4 532 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 ZNF784Q8NCA9 323 aaPredicted RBP20.34■□□□□ 0.85
VSX1-202ENST00000376709 FEM1CQ96JP0 617 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 ZNF599Q96NL3 588 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 OR52B2Q96RD2 323 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 MAGEH1Q9H213 219 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms