RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 FIBINQ8TAL6 211 aa17.82■□□□□ 0.44
CTTN-203ENST00000376561 C2orf49Q9BVC5 232 aaPredicted RBP17.82■□□□□ 0.44
CTTN-203ENST00000376561 CAB39LQ9H9S4 337 aa17.82■□□□□ 0.44
CTTN-203ENST00000376561 TDP1Q9NUW8 608 aa17.82■□□□□ 0.44
CTTN-203ENST00000376561 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.82■□□□□ 0.443e-6■■□□□ 12.2
CTTN-203ENST00000376561 CHD9Q3L8U1 2897 aa17.81■□□□□ 0.44
CTTN-203ENST00000376561 HADHAP40939 763 aa17.81■□□□□ 0.44
CTTN-203ENST00000376561 MPP1Q00013 466 aa17.81■□□□□ 0.44
CTTN-203ENST00000376561 LMAN2Q12907 356 aa17.81■□□□□ 0.44
CTTN-203ENST00000376561 IFT88Q13099 833 aa17.81■□□□□ 0.44
CTTN-203ENST00000376561 SHHQ15465 462 aa17.81■□□□□ 0.44
CTTN-203ENST00000376561 PRSS36Q5K4E3 855 aa17.81■□□□□ 0.44
CTTN-203ENST00000376561 SPATA21Q7Z572 469 aa17.81■□□□□ 0.44
CTTN-203ENST00000376561 GRASPQ7Z6J2 395 aaPredicted RBP17.81■□□□□ 0.44
CTTN-203ENST00000376561 RBM23Q86U06 439 aaKnown RBP17.81■□□□□ 0.44
CTTN-203ENST00000376561 BRSK1Q8TDC3 778 aa17.81■□□□□ 0.44
CTTN-203ENST00000376561 ZDHHC7Q9NXF8 308 aa17.81■□□□□ 0.44
CTTN-203ENST00000376561 KIAA1522Q9P206 1035 aaPredicted RBP17.81■□□□□ 0.44
CTTN-203ENST00000376561 FCF1Q9Y324 198 aaKnown RBP17.81■□□□□ 0.44
CTTN-203ENST00000376561 STARD13Q9Y3M8 1113 aa17.81■□□□□ 0.44
CTTN-203ENST00000376561 USP15Q9Y4E8 981 aaPredicted RBP17.81■□□□□ 0.44
CTTN-203ENST00000376561 KCTD3Q9Y597 815 aa17.81■□□□□ 0.44
CTTN-203ENST00000376561 PDE4DIPQ5VU43 2346 aa17.81■□□□□ 0.44
CTTN-203ENST00000376561 BPTFQ12830 3046 aa17.81■□□□□ 0.44
CTTN-203ENST00000376561 SOBPA7XYQ1 873 aa17.8■□□□□ 0.44
CTTN-203ENST00000376561 MT-CO1P00395 513 aa17.8■□□□□ 0.44
CTTN-203ENST00000376561 PRLP01236 227 aa17.8■□□□□ 0.44
CTTN-203ENST00000376561 CYBBP04839 570 aa17.8■□□□□ 0.44
CTTN-203ENST00000376561 ERVK-21P61565 698 aa17.8■□□□□ 0.44
CTTN-203ENST00000376561 LAMB3Q13751 1172 aa17.8■□□□□ 0.44
CTTN-203ENST00000376561 INSCQ1MX18 579 aa17.8■□□□□ 0.44
CTTN-203ENST00000376561 CALML6Q8TD86 181 aa17.8■□□□□ 0.44
CTTN-203ENST00000376561 PEX13Q92968 403 aa17.8■□□□□ 0.44
CTTN-203ENST00000376561 ACDQ96AP0 544 aa17.8■□□□□ 0.44
CTTN-203ENST00000376561 MECRQ9BV79 373 aa17.8■□□□□ 0.44
CTTN-203ENST00000376561 DPP7Q9UHL4 492 aa17.8■□□□□ 0.44
CTTN-203ENST00000376561 FBXO5Q9UKT4 447 aa17.8■□□□□ 0.44
CTTN-203ENST00000376561 EMCNQ9ULC0 261 aa17.8■□□□□ 0.44
CTTN-203ENST00000376561 PCDHGC4Q9Y5F7 938 aa17.8■□□□□ 0.44
CTTN-203ENST00000376561 RAI2Q9Y5P3 530 aa17.8■□□□□ 0.44
CTTN-203ENST00000376561 ARL5AQ9Y689 179 aa17.8■□□□□ 0.44
CTTN-203ENST00000376561 CCDC195A0A1B0GUA6 201 aa17.8■□□□□ 0.44
CTTN-203ENST00000376561 SLC7A4O43246 635 aa17.8■□□□□ 0.44
CTTN-203ENST00000376561 MPOP05164 745 aa17.8■□□□□ 0.44
CTTN-203ENST00000376561 PIRTP0C851 137 aa17.8■□□□□ 0.44
CTTN-203ENST00000376561 NEFHP12036 1026 aa17.8■□□□□ 0.44
CTTN-203ENST00000376561 ARSDP51689 593 aa17.8■□□□□ 0.44
CTTN-203ENST00000376561 RHOAP61586 193 aa17.8■□□□□ 0.44
CTTN-203ENST00000376561 DLG2Q15700 870 aa17.8■□□□□ 0.44
CTTN-203ENST00000376561 N4BP2L1Q5TBK1 243 aaPredicted RBP17.8■□□□□ 0.44
CTTN-203ENST00000376561 RETSATQ6NUM9 610 aa17.8■□□□□ 0.44
CTTN-203ENST00000376561 C16orf46Q6P387 395 aa17.8■□□□□ 0.44
CTTN-203ENST00000376561 NCEH1Q6PIU2 408 aa17.8■□□□□ 0.44
CTTN-203ENST00000376561 RMDN1Q96DB5 314 aa17.8■□□□□ 0.44
CTTN-203ENST00000376561 SLC39A10Q9ULF5 831 aa17.8■□□□□ 0.44
CTTN-203ENST00000376561 A0A096LPK6 155 aa17.79■□□□□ 0.44
CTTN-203ENST00000376561 PRAMEF12O95522 483 aa17.79■□□□□ 0.44
CTTN-203ENST00000376561 PDHA1P08559 390 aa17.79■□□□□ 0.44
CTTN-203ENST00000376561 BGNP21810 368 aa17.79■□□□□ 0.44
CTTN-203ENST00000376561 CD70P32970 193 aa17.79■□□□□ 0.44
CTTN-203ENST00000376561 GMPRP36959 345 aa17.79■□□□□ 0.44
CTTN-203ENST00000376561 PRAMEP78395 509 aa17.79■□□□□ 0.44
CTTN-203ENST00000376561 ACVR1Q04771 509 aa17.79■□□□□ 0.44
CTTN-203ENST00000376561 KIAA0408Q6ZU52 694 aa17.79■□□□□ 0.44
CTTN-203ENST00000376561 ADGRD2Q7Z7M1 963 aa17.79■□□□□ 0.44
CTTN-203ENST00000376561 HDAC10Q969S8 669 aa17.79■□□□□ 0.44
CTTN-203ENST00000376561 ZNF707Q96C28 371 aaPredicted RBP17.79■□□□□ 0.44
CTTN-203ENST00000376561 YBX2Q9Y2T7 364 aaKnown RBP17.79■□□□□ 0.44
CTTN-203ENST00000376561 MYOFQ9NZM1 2061 aa17.79■□□□□ 0.44
CTTN-203ENST00000376561 K7ERQ8 282 aa17.79■□□□□ 0.44
CTTN-203ENST00000376561 CCL22O00626 93 aa17.79■□□□□ 0.44
CTTN-203ENST00000376561 C2P06681 752 aa17.79■□□□□ 0.44
CTTN-203ENST00000376561 CSRP3P50461 194 aa17.79■□□□□ 0.44
CTTN-203ENST00000376561 PLEKHG6Q3KR16 790 aa17.79■□□□□ 0.44
CTTN-203ENST00000376561 OTOAQ7RTW8 1153 aa17.79■□□□□ 0.44
CTTN-203ENST00000376561 CCDC63Q8NA47 563 aa17.79■□□□□ 0.44
CTTN-203ENST00000376561 GABPB2Q8TAK5 448 aaPredicted RBP17.79■□□□□ 0.44
CTTN-203ENST00000376561 ZSWIM3Q96MP5 696 aa17.79■□□□□ 0.44
CTTN-203ENST00000376561 MFSD1Q9H3U5 465 aa17.79■□□□□ 0.44
CTTN-203ENST00000376561 SIRPGQ9P1W8 387 aa17.79■□□□□ 0.44
CTTN-203ENST00000376561 INTS6Q9UL03 887 aaKnown RBP17.79■□□□□ 0.44
CTTN-203ENST00000376561 CDH23Q9H251 3354 aa17.78■□□□□ 0.44
CTTN-203ENST00000376561 ATXN2Q99700 1313 aaKnown RBP17.78■□□□□ 0.44
CTTN-203ENST00000376561 KLF11O14901 512 aa17.78■□□□□ 0.44
CTTN-203ENST00000376561 PLIN3O60664 434 aa17.78■□□□□ 0.44
CTTN-203ENST00000376561 HAUS5O94927 633 aa17.78■□□□□ 0.44
CTTN-203ENST00000376561 BPGMP07738 259 aa17.78■□□□□ 0.44
CTTN-203ENST00000376561 CD151P48509 253 aa17.78■□□□□ 0.44
CTTN-203ENST00000376561 IRX4P78413 519 aa17.78■□□□□ 0.44
CTTN-203ENST00000376561 TRAF2Q12933 501 aa17.78■□□□□ 0.44
CTTN-203ENST00000376561 USP10Q14694 798 aaKnown RBP17.78■□□□□ 0.44
CTTN-203ENST00000376561 PTAR1Q7Z6K3 402 aaPredicted RBP17.78■□□□□ 0.44
CTTN-203ENST00000376561 TMEM25Q86YD3 366 aa17.78■□□□□ 0.44
CTTN-203ENST00000376561 OR6P1Q8NGX9 317 aa17.78■□□□□ 0.44
CTTN-203ENST00000376561 DNAJC1Q96KC8 554 aaKnown RBP17.78■□□□□ 0.44
CTTN-203ENST00000376561 CERS4Q9HA82 394 aa17.78■□□□□ 0.44
CTTN-203ENST00000376561 TMEM216Q9P0N5 145 aa17.78■□□□□ 0.44
CTTN-203ENST00000376561 RIMKLBQ9ULI2 386 aa17.78■□□□□ 0.44
CTTN-203ENST00000376561 SPO11Q9Y5K1 396 aa17.78■□□□□ 0.44
CTTN-203ENST00000376561 BIRC5O15392 142 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms