RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 SEMA3CQ99985 751 aa16.12■□□□□ 0.17
C11orf88-202ENST00000375618 CEP41Q9BYV8 373 aa16.12■□□□□ 0.17
C11orf88-202ENST00000375618 ATP13A3Q9H7F0 1226 aa16.12■□□□□ 0.17
C11orf88-202ENST00000375618 CAAP1Q9H8G2 361 aa16.12■□□□□ 0.17
C11orf88-202ENST00000375618 PCDH12Q9NPG4 1184 aa16.12■□□□□ 0.17
C11orf88-202ENST00000375618 SCUBE2Q9NQ36 999 aa16.12■□□□□ 0.17
C11orf88-202ENST00000375618 RBM22Q9NW64 420 aaKnown RBP eCLIP16.12■□□□□ 0.17
C11orf88-202ENST00000375618 SNX11Q9Y5W9 270 aa16.12■□□□□ 0.17
C11orf88-202ENST00000375618 DCHS1Q96JQ0 3298 aa16.12■□□□□ 0.17
C11orf88-202ENST00000375618 CEP250Q9BV73 2442 aa16.11■□□□□ 0.17
C11orf88-202ENST00000375618 CCDC66A2RUB6 948 aa16.11■□□□□ 0.17
C11orf88-202ENST00000375618 IGLON5A6NGN9 336 aa16.11■□□□□ 0.17
C11orf88-202ENST00000375618 UPK3BL1B0FP48 263 aa16.11■□□□□ 0.17
C11orf88-202ENST00000375618 UPK3BL2E5RIL1 263 aa16.11■□□□□ 0.17
C11orf88-202ENST00000375618 H0Y8X5 98 aa16.11■□□□□ 0.17
C11orf88-202ENST00000375618 HTRA2O43464 458 aaPredicted RBP16.11■□□□□ 0.17
C11orf88-202ENST00000375618 MMP20O60882 483 aa16.11■□□□□ 0.17
C11orf88-202ENST00000375618 SERPINA4P29622 427 aa16.11■□□□□ 0.17
C11orf88-202ENST00000375618 HSPA9P38646 679 aaKnown RBP16.11■□□□□ 0.17
C11orf88-202ENST00000375618 GRIA4P48058 902 aa16.11■□□□□ 0.17
C11orf88-202ENST00000375618 AFF3P51826 1226 aaKnown RBP16.11■□□□□ 0.17
C11orf88-202ENST00000375618 CLDN2P57739 230 aa16.11■□□□□ 0.17
C11orf88-202ENST00000375618 BCL2L1Q07817 233 aa16.11■□□□□ 0.17
C11orf88-202ENST00000375618 CCDC15Q0P6D6 951 aa16.11■□□□□ 0.17
C11orf88-202ENST00000375618 RALGDSQ12967 914 aa16.11■□□□□ 0.17
C11orf88-202ENST00000375618 ZNF211Q13398 564 aaPredicted RBP16.11■□□□□ 0.17
C11orf88-202ENST00000375618 GRM3Q14832 879 aa16.11■□□□□ 0.17
C11orf88-202ENST00000375618 PRKD1Q15139 912 aaPredicted RBP16.11■□□□□ 0.17
C11orf88-202ENST00000375618 PPP2R5EQ16537 467 aa16.11■□□□□ 0.17
C11orf88-202ENST00000375618 UGP2Q16851 508 aa16.11■□□□□ 0.17
C11orf88-202ENST00000375618 ODF2Q5BJF6 829 aa16.11■□□□□ 0.17
C11orf88-202ENST00000375618 ALG1LQ6GMV1 187 aa16.11■□□□□ 0.17
C11orf88-202ENST00000375618 NAPEPLDQ6IQ20 393 aa16.11■□□□□ 0.17
C11orf88-202ENST00000375618 TIGD7Q6NT04 549 aaPredicted RBP16.11■□□□□ 0.17
C11orf88-202ENST00000375618 BBS12Q6ZW61 710 aa16.11■□□□□ 0.17
C11orf88-202ENST00000375618 PEX26Q7Z412 305 aa16.11■□□□□ 0.17
C11orf88-202ENST00000375618 CCDC50Q8IVM0 306 aa16.11■□□□□ 0.17
C11orf88-202ENST00000375618 HCAR2Q8TDS4 363 aa16.11■□□□□ 0.17
C11orf88-202ENST00000375618 RBM41Q96IZ5 413 aaKnown RBP16.11■□□□□ 0.17
C11orf88-202ENST00000375618 SMIM14Q96QK8 99 aa16.11■□□□□ 0.17
C11orf88-202ENST00000375618 KLF6Q99612 283 aaPredicted RBP16.11■□□□□ 0.17
C11orf88-202ENST00000375618 IL12RB2Q99665 862 aa16.11■□□□□ 0.17
C11orf88-202ENST00000375618 WRAP53Q9BUR4 548 aaKnown RBP16.11■□□□□ 0.17
C11orf88-202ENST00000375618 C1QTNF2Q9BXJ5 285 aa16.11■□□□□ 0.17
C11orf88-202ENST00000375618 TMEM9BQ9NQ34 198 aa16.11■□□□□ 0.17
C11orf88-202ENST00000375618 AASDHPPTQ9NRN7 309 aa16.11■□□□□ 0.17
C11orf88-202ENST00000375618 CDV3Q9UKY7 258 aaKnown RBP16.11■□□□□ 0.17
C11orf88-202ENST00000375618 GUCA1BQ9UMX6 200 aa16.11■□□□□ 0.17
C11orf88-202ENST00000375618 ANKRD6Q9Y2G4 727 aa16.11■□□□□ 0.17
C11orf88-202ENST00000375618 DCDC2BA2VCK2 349 aa16.1■□□□□ 0.17
C11orf88-202ENST00000375618 RIOK3O14730 519 aaKnown RBP16.1■□□□□ 0.17
C11orf88-202ENST00000375618 VILLO15195 856 aa16.1■□□□□ 0.17
C11orf88-202ENST00000375618 TSPAN6O43657 245 aa16.1■□□□□ 0.17
C11orf88-202ENST00000375618 PAK4O96013 591 aaPredicted RBP16.1■□□□□ 0.17
C11orf88-202ENST00000375618 JCHAINP01591 159 aa16.1■□□□□ 0.17
C11orf88-202ENST00000375618 MMP2P08253 660 aa16.1■□□□□ 0.17
C11orf88-202ENST00000375618 ZFXP17010 805 aaPredicted RBP16.1■□□□□ 0.17
C11orf88-202ENST00000375618 RPS21P63220 83 aaKnown RBP16.1■□□□□ 0.17
C11orf88-202ENST00000375618 IFI35P80217 286 aaPredicted RBP16.1■□□□□ 0.17
C11orf88-202ENST00000375618 AP1B1Q10567 949 aa16.1■□□□□ 0.17
C11orf88-202ENST00000375618 TFDP2Q14188 446 aa16.1■□□□□ 0.17
C11orf88-202ENST00000375618 SETMARQ53H47 684 aaPredicted RBP16.1■□□□□ 0.17
C11orf88-202ENST00000375618 KIAA1161Q6NSJ0 714 aa16.1■□□□□ 0.17
C11orf88-202ENST00000375618 BRAT1Q6PJG6 821 aa16.1■□□□□ 0.17
C11orf88-202ENST00000375618 GCNT7Q6ZNI0 430 aa16.1■□□□□ 0.17
C11orf88-202ENST00000375618 SPATS2Q86XZ4 545 aaKnown RBP16.1■□□□□ 0.17
C11orf88-202ENST00000375618 NSMCE1Q8WV22 266 aa16.1■□□□□ 0.17
C11orf88-202ENST00000375618 ZNF830Q96NB3 372 aaPredicted RBP16.1■□□□□ 0.17
C11orf88-202ENST00000375618 SLC17A9Q9BYT1 436 aa16.1■□□□□ 0.17
C11orf88-202ENST00000375618 KCNF1Q9H3M0 494 aa16.1■□□□□ 0.17
C11orf88-202ENST00000375618 C10orf88Q9H8K7 445 aa16.1■□□□□ 0.17
C11orf88-202ENST00000375618 AMFRQ9UKV5 643 aa16.1■□□□□ 0.17
C11orf88-202ENST00000375618 DMTF1Q9Y222 760 aa16.1■□□□□ 0.17
C11orf88-202ENST00000375618 FNDC3AQ9Y2H6 1198 aaKnown RBP16.1■□□□□ 0.17
C11orf88-202ENST00000375618 ATP8A1Q9Y2Q0 1164 aa16.1■□□□□ 0.17
C11orf88-202ENST00000375618 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.1■□□□□ 0.17
C11orf88-202ENST00000375618 PRAMEF26H0Y7S4 382 aa16.09■□□□□ 0.17
C11orf88-202ENST00000375618 PDHA1P08559 390 aa16.09■□□□□ 0.17
C11orf88-202ENST00000375618 TGM2P21980 687 aa16.09■□□□□ 0.17
C11orf88-202ENST00000375618 CD38P28907 300 aa16.09■□□□□ 0.17
C11orf88-202ENST00000375618 PTPN7P35236 360 aa16.09■□□□□ 0.17
C11orf88-202ENST00000375618 MMP12P39900 470 aa16.09■□□□□ 0.17
C11orf88-202ENST00000375618 CTSKP43235 329 aa16.09■□□□□ 0.17
C11orf88-202ENST00000375618 ID4P47928 161 aa16.09■□□□□ 0.17
C11orf88-202ENST00000375618 RWDD2BP57060 319 aa16.09■□□□□ 0.17
C11orf88-202ENST00000375618 PDK1Q15118 436 aa16.09■□□□□ 0.17
C11orf88-202ENST00000375618 HLA-BQ31612 363 aa16.09■□□□□ 0.17
C11orf88-202ENST00000375618 UAP1L1Q3KQV9 507 aa16.09■□□□□ 0.17
C11orf88-202ENST00000375618 TMEM52BQ4KMG9 183 aa16.09■□□□□ 0.17
C11orf88-202ENST00000375618 PRAMEF14Q5SWL7 426 aa16.09■□□□□ 0.17
C11orf88-202ENST00000375618 BBS5Q8N3I7 341 aa16.09■□□□□ 0.17
C11orf88-202ENST00000375618 RNF10Q8N5U6 811 aaKnown RBP16.09■□□□□ 0.17
C11orf88-202ENST00000375618 HES6Q96HZ4 224 aa16.09■□□□□ 0.17
C11orf88-202ENST00000375618 FEM1CQ96JP0 617 aa16.09■□□□□ 0.17
C11orf88-202ENST00000375618 BMFQ96LC9 184 aa16.09■□□□□ 0.17
C11orf88-202ENST00000375618 FAM118BQ9BPY3 351 aa16.09■□□□□ 0.17
C11orf88-202ENST00000375618 OSBPL8Q9BZF1 889 aa16.09■□□□□ 0.17
C11orf88-202ENST00000375618 LZTFL1Q9NQ48 299 aa16.09■□□□□ 0.17
C11orf88-202ENST00000375618 TPX2Q9ULW0 747 aaKnown RBP16.09■□□□□ 0.17
C11orf88-202ENST00000375618 COQ6Q9Y2Z9 468 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms