RNA–Protein interactions for RNA: ENST00000375549.7

SDHD-201, Transcript of succinate dehydrogenase complex subunit D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHD, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-201ENST00000375549 CAVIN3Q969G5 261 aa12.39□□□□□ -0.43
SDHD-201ENST00000375549 RMDN1Q96DB5 314 aa12.39□□□□□ -0.43
SDHD-201ENST00000375549 TUBGCP5Q96RT8 1024 aa12.39□□□□□ -0.43
SDHD-201ENST00000375549 ARHGEF3Q9NR81 526 aa12.39□□□□□ -0.43
SDHD-201ENST00000375549 BFARQ9NZS9 450 aa12.39□□□□□ -0.43
SDHD-201ENST00000375549 IL36AQ9UHA7 158 aa12.39□□□□□ -0.43
SDHD-201ENST00000375549 ARIH1Q9Y4X5 557 aaPredicted RBP12.39□□□□□ -0.43
SDHD-201ENST00000375549 PCDHB9Q9Y5E1 797 aa12.39□□□□□ -0.43
SDHD-201ENST00000375549 SDR42E2A6NKP2 422 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 SHISA7A6NL88 538 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 DYNC1I1O14576 645 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 NPC1O15118 1278 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 EIF3HO15372 352 aaKnown RBP eCLIP12.38□□□□□ -0.43
SDHD-201ENST00000375549 SOCS5O75159 536 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 LEFTY1O75610 366 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 NDST3O95803 873 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 EPOP01588 193 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 UGT2B4P06133 528 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 ATXN1LP0C7T5 689 aaKnown RBP12.38□□□□□ -0.43
SDHD-201ENST00000375549 HLA-DPA1P20036 260 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 NTSR1P30989 418 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 ELK3P41970 407 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 MAGEA3P43357 314 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 MAGEA4P43358 317 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 NPY2RP49146 381 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 EPHB1P54762 984 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 CRADDP78560 199 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 PRKCQQ04759 706 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 FASTKD3Q14CZ7 662 aaKnown RBP12.38□□□□□ -0.43
SDHD-201ENST00000375549 CFAP58Q5T655 872 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 CASC4Q6P4E1 433 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 GDPD4Q6W3E5 623 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 TMC3Q7Z5M5 1100 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 MPP5Q8N3R9 675 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 FBXO36Q8NEA4 188 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 HNRNPLLQ8WVV9 542 aaKnown RBP12.38□□□□□ -0.43
SDHD-201ENST00000375549 KLHL32Q96NJ5 620 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 TRIB3Q96RU7 358 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 ADGRE3Q9BY15 652 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 CPEB1Q9BZB8 566 aaKnown RBP12.38□□□□□ -0.43
SDHD-201ENST00000375549 SUV39H2Q9H5I1 410 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 ARFGAP3Q9NP61 516 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 SYBUQ9NX95 663 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 CHMP2BQ9UQN3 213 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 MAD1L1Q9Y6D9 718 aa12.38□□□□□ -0.43
SDHD-201ENST00000375549 E7ESA3 106 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 TRAFD1O14545 582 aaPredicted RBP12.37□□□□□ -0.43
SDHD-201ENST00000375549 ALOX15BO15296 676 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 HTRA2O43464 458 aaPredicted RBP12.37□□□□□ -0.43
SDHD-201ENST00000375549 FZD6O60353 706 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 SYNCRIPO60506 623 aaKnown RBP12.37□□□□□ -0.43
SDHD-201ENST00000375549 RNF40O75150 1001 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 PGLSO95336 258 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 KLF8O95600 359 aaPredicted RBP12.37□□□□□ -0.43
SDHD-201ENST00000375549 CPP00450 1065 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 PRLP01236 227 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 FGF1P05230 155 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 CTSLP07711 333 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 SLC8A1P32418 973 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 PMS2P54278 862 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 ENPP2Q13822 863 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 POU6F1Q14863 301 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 FBXO43Q4G163 708 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 BEND6Q5SZJ8 279 aaPredicted RBP12.37□□□□□ -0.43
SDHD-201ENST00000375549 TRMT11Q7Z4G4 463 aaKnown RBP12.37□□□□□ -0.43
SDHD-201ENST00000375549 GJD3Q8N144 294 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 AGGF1Q8N302 714 aaeCLIP12.37□□□□□ -0.43
SDHD-201ENST00000375549 IL17RCQ8NAC3 791 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 TXNDC5Q8NBS9 432 aaKnown RBP12.37□□□□□ -0.43
SDHD-201ENST00000375549 KCNV2Q8TDN2 545 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 PYROXD1Q8WU10 500 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 UBLCP1Q8WVY7 318 aaPredicted RBP12.37□□□□□ -0.43
SDHD-201ENST00000375549 ANKRD7Q92527 254 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 VOPP1Q96AW1 172 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 SIGLEC10Q96LC7 697 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 C9orf72Q96LT7 481 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 ZNF641Q96N77 438 aaPredicted RBP12.37□□□□□ -0.43
SDHD-201ENST00000375549 PHACTR1Q9C0D0 580 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 CDC42EP4Q9H3Q1 356 aaKnown RBP12.37□□□□□ -0.43
SDHD-201ENST00000375549 ARNT2Q9HBZ2 717 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 PRSS16Q9NQE7 514 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 SAMD15Q9P1V8 674 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 WNT16Q9UBV4 365 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 WASF2Q9Y6W5 498 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 PRUNE2Q8WUY3 3088 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 KRBA1A5PL33 1030 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 PRNPP04156 253 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 PIRTP0C851 137 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 CTPS1P17812 591 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 MRPS21P82921 87 aaKnown RBP12.37□□□□□ -0.43
SDHD-201ENST00000375549 CCINQ13939 588 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 SEPT6Q14141 434 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 ELAVL3Q14576 367 aaKnown RBP12.37□□□□□ -0.43
SDHD-201ENST00000375549 KYNUQ16719 465 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 QPCTQ16769 361 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 POM121L1PQ3SYA9 428 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 CCDC38Q502W7 563 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 CAPN12Q6ZSI9 719 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 IGDCC3Q8IVU1 814 aa12.37□□□□□ -0.43
SDHD-201ENST00000375549 PALM2Q8IXS6 379 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms