RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 DHRSXQ8N5I4 330 aa14.81□□□□□ -0.04
NOTCH4-201ENST00000375023 ETNPPLQ8TBG4 499 aa14.81□□□□□ -0.04
NOTCH4-201ENST00000375023 SLC35C1Q96A29 364 aa14.81□□□□□ -0.04
NOTCH4-201ENST00000375023 C18orf25Q96B23 403 aaPredicted RBP14.81□□□□□ -0.04
NOTCH4-201ENST00000375023 CRISPLD1Q9H336 500 aa14.81□□□□□ -0.04
NOTCH4-201ENST00000375023 EPS8L2Q9H6S3 715 aa14.81□□□□□ -0.04
NOTCH4-201ENST00000375023 TMEM138Q9NPI0 162 aa14.81□□□□□ -0.04
NOTCH4-201ENST00000375023 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.81□□□□□ -0.04
NOTCH4-201ENST00000375023 TNFRSF21O75509 655 aa14.81□□□□□ -0.04
NOTCH4-201ENST00000375023 CDK16Q00536 496 aa14.81□□□□□ -0.04
NOTCH4-201ENST00000375023 SLC34A1Q06495 639 aa14.81□□□□□ -0.04
NOTCH4-201ENST00000375023 UGCGQ16739 394 aa14.81□□□□□ -0.04
NOTCH4-201ENST00000375023 ADGRG2Q8IZP9 1017 aa14.81□□□□□ -0.04
NOTCH4-201ENST00000375023 LENG1Q96BZ8 264 aaPredicted RBP14.81□□□□□ -0.04
NOTCH4-201ENST00000375023 WDR18Q9BV38 432 aa14.81□□□□□ -0.04
NOTCH4-201ENST00000375023 B3GNT5Q9BYG0 378 aa14.81□□□□□ -0.04
NOTCH4-201ENST00000375023 DIABLOQ9NR28 239 aa14.81□□□□□ -0.04
NOTCH4-201ENST00000375023 NPEPPSL1A6NEC2 478 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 VPS4BO75351 444 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 DBTP11182 482 aaKnown RBP14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 NOS2P35228 1153 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 PAGE2BQ5JRK9 111 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 ATAT1Q5SQI0 421 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 ZDHHC17Q8IUH5 632 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 IL31RAQ8NI17 732 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 LRRC39Q96DD0 335 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 CLEC4MQ9H2X3 399 aaPredicted RBP14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 L1RE1Q9UN81 338 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 SH3GLB1Q9Y371 365 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 YDJCA8MPS7 323 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 LIN7AO14910 233 aaPredicted RBP14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 SLC25A14O95258 325 aaPredicted RBP14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 MYBPC2Q14324 1141 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 FRG1Q14331 258 aaKnown RBP14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 PARP6Q2NL67 630 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 PERM1Q5SV97 790 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 DCBLD2Q96PD2 775 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 PRKD2Q9BZL6 878 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 BLOC1S4Q9NUP1 217 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 MCUBQ9NWR8 336 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 ZNF222Q9UK12 451 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 VAV3Q9UKW4 847 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 CNOT6Q9ULM6 557 aaKnown RBP14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 ASF1AQ9Y294 204 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 PPP2R3BQ9Y5P8 575 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 FKBP6O75344 327 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 TLX1P31314 330 aaPredicted RBP14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 PYDC2Q56P42 97 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 AMIGO2Q86SJ2 522 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 PIGZQ86VD9 579 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 OR5B17Q8NGF7 314 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 NKX2-3Q8TAU0 364 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 PDCD10Q9BUL8 212 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 ASB7Q9H672 318 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 MARCH7Q9H992 704 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 SLC28A2O43868 658 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 GABRR2P28476 465 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 RPL7AP62424 266 aaKnown RBP14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 DUSP4Q13115 394 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 PTPN20Q4JDL3 420 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 SPESP1Q6UW49 350 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 LINGO4Q6UY18 593 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 FBXO22Q8NEZ5 403 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 LINGO1Q96FE5 620 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 SLC4A9Q96Q91 983 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 PORCNQ9H237 461 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 MYRFQ9Y2G1 1151 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 ARIH1Q9Y4X5 557 aaPredicted RBP14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 TNS2Q63HR2 1409 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 CD3EAPO15446 510 aaKnown RBP14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 MAGP20916 626 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 TRMT5Q32P41 509 aaKnown RBP14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 GALNT5Q7Z7M9 940 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 LDB1Q86U70 411 aaPredicted RBP14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 CDH24Q86UP0 819 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 EXOC3L1Q86VI1 746 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 OR14C36Q8NHC7 312 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 NXF3Q9H4D5 531 aaKnown RBP14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 UMODL1Q5DID0 1318 aa14.8□□□□□ -0.04
NOTCH4-201ENST00000375023 E9PCH4 1651 aa14.79□□□□□ -0.04
NOTCH4-201ENST00000375023 CYP1A1P04798 512 aaPredicted RBP14.79□□□□□ -0.04
NOTCH4-201ENST00000375023 USP46P62068 366 aa14.79□□□□□ -0.04
NOTCH4-201ENST00000375023 RBM43Q6ZSC3 357 aaKnown RBP14.79□□□□□ -0.04
NOTCH4-201ENST00000375023 GPR142Q7Z601 462 aa14.79□□□□□ -0.04
NOTCH4-201ENST00000375023 SVOPQ8N4V2 548 aa14.79□□□□□ -0.04
NOTCH4-201ENST00000375023 RTL3Q8N8U3 475 aaKnown RBP14.79□□□□□ -0.04
NOTCH4-201ENST00000375023 TRPM4Q8TD43 1214 aa14.79□□□□□ -0.04
NOTCH4-201ENST00000375023 MCMBPQ9BTE3 642 aa14.79□□□□□ -0.04
NOTCH4-201ENST00000375023 TLR10Q9BXR5 811 aa14.79□□□□□ -0.04
NOTCH4-201ENST00000375023 PTGFRNQ9P2B2 879 aa14.79□□□□□ -0.04
NOTCH4-201ENST00000375023 FAM198AQ9UFP1 575 aa14.79□□□□□ -0.04
NOTCH4-201ENST00000375023 POLR3HQ9Y535 204 aaPredicted RBP14.79□□□□□ -0.04
NOTCH4-201ENST00000375023 NCOA3Q9Y6Q9 1424 aa14.79□□□□□ -0.04
NOTCH4-201ENST00000375023 PRMT9Q6P2P2 845 aa14.79□□□□□ -0.04
NOTCH4-201ENST00000375023 DCBLD1Q8N8Z6 715 aa14.79□□□□□ -0.04
NOTCH4-201ENST00000375023 MAGEC3Q8TD91 643 aa14.79□□□□□ -0.04
NOTCH4-201ENST00000375023 QKIQ96PU8 341 aaKnown RBP eCLIP14.79□□□□□ -0.04
NOTCH4-201ENST00000375023 ZYG11BQ9C0D3 744 aa14.79□□□□□ -0.04
NOTCH4-201ENST00000375023 ATP13A3Q9H7F0 1226 aa14.79□□□□□ -0.04
NOTCH4-201ENST00000375023 CAMSAP1Q5T5Y3 1602 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms