RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 TUFMP49411 452 aaKnown RBP12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 DRG2P55039 364 aaKnown RBP12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 PTSQ03393 145 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 PLD1Q13393 1074 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 LRRC38Q5VT99 294 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 WSCD1Q658N2 575 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 CCDC80Q76M96 950 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 DENND6AQ8IWF6 608 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 RP9Q8TA86 221 aaKnown RBP12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 C18orf25Q96B23 403 aaPredicted RBP12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 TAS2R14Q9NYV8 317 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 RBPJLQ9UBG7 517 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 SERPINA6P08185 405 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 GSTM5P46439 218 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 NAGLUP54802 743 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 BST1Q10588 318 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 MAMLD1Q13495 774 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 GLT6D1Q7Z4J2 308 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 GPSM1Q86YR5 675 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.37□□□□□ -0.432e-6■■■■■ 163.7
NPLOC4-202ENST00000374747 BSNDQ8WZ55 320 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 ART4Q93070 314 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 MYDGFQ969H8 173 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 IL22Q9GZX6 179 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 PCDHA11Q9Y5I1 949 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 SPTLC1O15269 473 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 DUSP11O75319 330 aaKnown RBP12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 LCA5LO95447 670 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 LTA4HP09960 611 aaKnown RBP12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 TUBP50607 506 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 TBX4P57082 545 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 INTS11Q5TA45 600 aaKnown RBP12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 RETSATQ6NUM9 610 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 C16orf62Q7Z3J2 963 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 PSMA8Q8TAA3 256 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 NUDT5Q9UKK9 219 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 GMPPBQ9Y5P6 360 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 DOCK2Q92608 1830 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 CNTNAP1P78357 1384 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 OR56A5P0C7T3 313 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 USP46P62068 366 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 ACSM2AQ08AH3 577 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 BNIP2Q12982 314 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 ACSM2BQ68CK6 577 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 TFAP2DQ7Z6R9 452 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 MYLPFQ96A32 169 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 ZHX1-C8orf76Q96EF9 292 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 SEMA4BQ9NPR2 832 aaPredicted RBP12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 LEF1Q9UJU2 399 aaPredicted RBP12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 F8VP50 259 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 ABLIM1O14639 778 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 FOLH1Q04609 750 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 TRAP1Q12931 704 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 QPRTQ15274 297 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 AADACL2Q6P093 401 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 PANX3Q96QZ0 392 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 SENP6Q9GZR1 1112 aaPredicted RBP12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 DMTF1Q9Y222 760 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 SLC45A1Q9Y2W3 748 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 LIASO43766 372 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 COX7A2P14406 83 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 YBX3P16989 372 aaKnown RBP eCLIP12.36□□□□□ -0.431e-7■□□□□ 9.7
NPLOC4-202ENST00000374747 NPR3P17342 541 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 GTF2E2P29084 291 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 NOS2P35228 1153 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 BOP1Q14137 746 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 SKIV2LQ15477 1246 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 ZIK1Q3SY52 487 aaPredicted RBP12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 SLC39A12Q504Y0 691 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 DDI2Q5TDH0 399 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 OLFML1Q6UWY5 402 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 ACMSDQ8TDX5 336 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 VMP1Q96GC9 406 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 LRRC19Q9H756 370 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 ZNF112Q9UJU3 913 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 RPS6KA6Q9UK32 745 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 PCDHA2Q9Y5H9 948 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 HMGB3O15347 200 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 ZMPSTE24O75844 475 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 CDH3P22223 829 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 ATP5F1P24539 256 aaPredicted RBP12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 OR1E1P30953 314 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 MAPKAPK2P49137 400 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 PSMD4P55036 377 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 ZNF846Q147U1 533 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 NEPROQ6NW34 567 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 MARK4Q96L34 752 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 ADI1Q9BV57 179 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 ATXN3LQ9H3M9 355 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 CLK4Q9HAZ1 481 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 AP4B1Q9Y6B7 739 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 TIAM2Q8IVF5 1701 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 FAM47E-STBD1D6RA91 191 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 USP12O75317 370 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 OR6B1O95007 311 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 BDNFP23560 247 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 DENND5AQ6IQ26 1287 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 BCORQ6W2J9 1755 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 GATAD2AQ86YP4 633 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 HIPK1Q86Z02 1210 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms