RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 SF3B1O75533 1304 aaKnown RBP eCLIP11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 F8W8V4 182 aa11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 DCLK1O15075 740 aa11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 LTA4HP09960 611 aaKnown RBP11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 PIK3CGP48736 1102 aa11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 SMAD3P84022 425 aaKnown RBP11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 BTG3Q14201 252 aaPredicted RBP11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 PCLAFQ15004 111 aa11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 LSM12Q3MHD2 195 aaKnown RBP11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 SAPCD2Q86UD0 394 aa11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 FBXO39Q8N4B4 442 aa11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 CNTD1Q8N815 330 aa11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 BHLHE22Q8NFJ8 381 aaPredicted RBP11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 SLC7A8Q9UHI5 535 aa11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 LRRC37AA6NMS7 1700 aa11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 SIX3O95343 332 aaPredicted RBP11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 LINC00032P0C843 101 aa11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 T-ENOLP0DO92 83 aa11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 RAD51Q06609 339 aa11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 LBRQ14739 615 aaKnown RBP11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 PAFAH1B3Q15102 231 aaKnown RBP11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 TMTC4Q5T4D3 741 aa11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 RTL3Q8N8U3 475 aaKnown RBP11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 YME1L1Q96TA2 773 aa11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 ACOX2Q99424 681 aa11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 C1orf50Q9BV19 199 aa11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 PRKD2Q9BZL6 878 aa11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 CYLDQ9NQC7 956 aa11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 CATSPERZQ9NTU4 200 aa11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 RNF186Q9NXI6 227 aa11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 RAP2CQ9Y3L5 183 aa11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 TCAF1Q9Y4C2 921 aa11.89□□□□□ -0.51
PACSIN1-202ENST00000374043 SIPA1L1O43166 1804 aa11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 CCNCP24863 283 aa11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 CALRP27797 417 aaKnown RBP11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 USP46P62068 366 aa11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 HECTD2Q5U5R9 776 aa11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 FUT10Q6P4F1 479 aa11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 POTEHQ6S545 545 aa11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 MIER2Q8N344 545 aa11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 ZNF333Q96JL9 665 aa11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 GIMAP2Q9UG22 337 aa11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 FETUBQ9UGM5 382 aa11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 RBM47A0AV96 593 aaKnown RBP11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 SAC3D1A6NKF1 404 aa11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 VPS26AO75436 327 aa11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 SORBS2O94875 1100 aaKnown RBP11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 CRTAMO95727 393 aa11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 ATP5F1P24539 256 aaPredicted RBP11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 CD68P34810 354 aaPredicted RBP11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 HTRA3P83110 453 aa11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 RIPK1Q13546 671 aa11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 TBCCQ15814 346 aa11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 NTAN1Q96AB6 310 aa11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 MTFMTQ96DP5 389 aaKnown RBP11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 GPR62Q9BZJ7 368 aa11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 WDR6Q9NNW5 1121 aaKnown RBP11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 H7C4K7 107 aa11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 TGDSO95455 350 aa11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 PLOD1Q02809 727 aaPredicted RBP11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 DEFB115Q30KQ5 88 aa11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 TNFAIP8L3Q5GJ75 292 aa11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 LRRC73Q5JTD7 316 aa11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 MORN1Q5T089 497 aa11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 HECTD3Q5T447 861 aa11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 SERINC5Q86VE9 423 aa11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 ZNF184Q99676 751 aaPredicted RBP11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 MOCS1Q9NZB8 636 aa11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 EGFL7Q9UHF1 273 aa11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 MCM8Q9UJA3 840 aa11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 KIAA1217Q5T5P2 1943 aa11.88□□□□□ -0.51
PACSIN1-202ENST00000374043 MRASO14807 208 aa11.87□□□□□ -0.51
PACSIN1-202ENST00000374043 CD3EAPO15446 510 aaKnown RBP11.87□□□□□ -0.51
PACSIN1-202ENST00000374043 SMNDC1O75940 238 aaKnown RBP eCLIP11.87□□□□□ -0.51
PACSIN1-202ENST00000374043 CABYRO75952 493 aa11.87□□□□□ -0.51
PACSIN1-202ENST00000374043 CYP2C18P33260 490 aa11.87□□□□□ -0.51
PACSIN1-202ENST00000374043 DPYSQ14117 519 aa11.87□□□□□ -0.51
PACSIN1-202ENST00000374043 SWT1Q5T5J6 900 aaKnown RBP11.87□□□□□ -0.51
PACSIN1-202ENST00000374043 LRRC8DQ7L1W4 858 aa11.87□□□□□ -0.51
PACSIN1-202ENST00000374043 LINC01465Q8N7H1 131 aa11.87□□□□□ -0.51
PACSIN1-202ENST00000374043 TRPV1Q8NER1 839 aa11.87□□□□□ -0.51
PACSIN1-202ENST00000374043 UCMAQ8WVF2 138 aa11.87□□□□□ -0.51
PACSIN1-202ENST00000374043 UTP4Q969X6 686 aaKnown RBP11.87□□□□□ -0.51
PACSIN1-202ENST00000374043 BTN2A3PQ96KV6 586 aa11.87□□□□□ -0.51
PACSIN1-202ENST00000374043 SEPHS2Q99611 448 aa11.87□□□□□ -0.51
PACSIN1-202ENST00000374043 TTPALQ9BTX7 342 aa11.87□□□□□ -0.51
PACSIN1-202ENST00000374043 CAAP1Q9H8G2 361 aa11.87□□□□□ -0.51
PACSIN1-202ENST00000374043 SEPT3Q9UH03 358 aa11.87□□□□□ -0.51
PACSIN1-202ENST00000374043 LSM7Q9UK45 103 aaKnown RBP11.87□□□□□ -0.51
PACSIN1-202ENST00000374043 ZFP37Q9Y6Q3 630 aaPredicted RBP11.87□□□□□ -0.51
PACSIN1-202ENST00000374043 A0A0D9SEW6 157 aa11.87□□□□□ -0.51
PACSIN1-202ENST00000374043 PSMD12O00232 456 aaPredicted RBP11.87□□□□□ -0.51
PACSIN1-202ENST00000374043 FFAR3O14843 346 aa11.87□□□□□ -0.51
PACSIN1-202ENST00000374043 GPR42O15529 346 aa11.87□□□□□ -0.51
PACSIN1-202ENST00000374043 TBL1XO60907 577 aa11.87□□□□□ -0.51
PACSIN1-202ENST00000374043 RTN3O95197 1032 aaPredicted RBP11.87□□□□□ -0.51
PACSIN1-202ENST00000374043 OAS1P00973 400 aaKnown RBP11.87□□□□□ -0.51
PACSIN1-202ENST00000374043 URODP06132 367 aa11.87□□□□□ -0.51
PACSIN1-202ENST00000374043 FYNP06241 537 aa11.87□□□□□ -0.51
PACSIN1-202ENST00000374043 FGF3P11487 239 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms