RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 MGAT4DA6NG13 374 aa17.52■□□□□ 0.4
PTPRU-202ENST00000373779 TK2O00142 265 aa17.52■□□□□ 0.4
PTPRU-202ENST00000373779 MAXP61244 160 aa17.52■□□□□ 0.4
PTPRU-202ENST00000373779 UBE3AQ05086 875 aa17.52■□□□□ 0.4
PTPRU-202ENST00000373779 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.52■□□□□ 0.4
PTPRU-202ENST00000373779 FSCN1Q16658 493 aaKnown RBP17.52■□□□□ 0.4
PTPRU-202ENST00000373779 RGS21Q2M5E4 152 aa17.52■□□□□ 0.4
PTPRU-202ENST00000373779 DEFB132Q7Z7B7 95 aa17.52■□□□□ 0.4
PTPRU-202ENST00000373779 DDX53Q86TM3 631 aaKnown RBP17.52■□□□□ 0.4
PTPRU-202ENST00000373779 AADATQ8N5Z0 425 aa17.52■□□□□ 0.4
PTPRU-202ENST00000373779 MTG1Q9BT17 334 aaPredicted RBP17.52■□□□□ 0.4
PTPRU-202ENST00000373779 DPYSL4O14531 572 aa17.52■□□□□ 0.4
PTPRU-202ENST00000373779 TSPAN1O60635 241 aa17.52■□□□□ 0.4
PTPRU-202ENST00000373779 CHI3L1P36222 383 aaPredicted RBP17.52■□□□□ 0.4
PTPRU-202ENST00000373779 MAPK11Q15759 364 aa17.52■□□□□ 0.4
PTPRU-202ENST00000373779 AZIN2Q96A70 460 aa17.52■□□□□ 0.4
PTPRU-202ENST00000373779 ZBED2Q9BTP6 218 aa17.52■□□□□ 0.4
PTPRU-202ENST00000373779 DPEP3Q9H4B8 488 aa17.52■□□□□ 0.4
PTPRU-202ENST00000373779 ZNF536O15090 1300 aa17.52■□□□□ 0.4
PTPRU-202ENST00000373779 F8W810 466 aa17.52■□□□□ 0.39
PTPRU-202ENST00000373779 HSMCR30P0CW71 290 aa17.52■□□□□ 0.39
PTPRU-202ENST00000373779 FGFR1P11362 822 aa17.52■□□□□ 0.39
PTPRU-202ENST00000373779 DPYSL2Q16555 572 aa17.52■□□□□ 0.39
PTPRU-202ENST00000373779 MTMR14Q8NCE2 650 aa17.52■□□□□ 0.39
PTPRU-202ENST00000373779 OR2T34Q8NGX1 318 aa17.52■□□□□ 0.39
PTPRU-202ENST00000373779 OR2T3Q8NH03 318 aa17.52■□□□□ 0.39
PTPRU-202ENST00000373779 PLEKHA8Q96JA3 519 aa17.52■□□□□ 0.39
PTPRU-202ENST00000373779 OPTCQ9UBM4 332 aa17.52■□□□□ 0.39
PTPRU-202ENST00000373779 FAM159BA6NKW6 160 aa17.52■□□□□ 0.39
PTPRU-202ENST00000373779 ITM2AO43736 263 aa17.52■□□□□ 0.39
PTPRU-202ENST00000373779 RTN3O95197 1032 aaPredicted RBP17.52■□□□□ 0.39
PTPRU-202ENST00000373779 PPTC7Q8NI37 304 aa17.52■□□□□ 0.39
PTPRU-202ENST00000373779 RRM2P31350 389 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 NOVP48745 357 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 LBX2Q6XYB7 198 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 USE1Q9NZ43 259 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 PNMA8BQ9ULN7 279 aaPredicted RBP17.51■□□□□ 0.39
PTPRU-202ENST00000373779 FZD10Q9ULW2 581 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 CD3EAPO15446 510 aaKnown RBP17.51■□□□□ 0.39
PTPRU-202ENST00000373779 MSCO60682 206 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 CELF2O95319 508 aaKnown RBP17.51■□□□□ 0.39
PTPRU-202ENST00000373779 PTPN3P26045 913 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 S100A3P33764 101 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 MOGSQ13724 837 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 ADGRE1Q14246 886 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 SIX1Q15475 284 aaPredicted RBP17.51■□□□□ 0.39
PTPRU-202ENST00000373779 RAP1GAP2Q684P5 730 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 REP15Q6BDI9 236 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 DCLRE1AQ6PJP8 1040 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 ADCK2Q7Z695 626 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 STK40Q8N2I9 435 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 C19orf60Q96EN9 201 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 TUBGCP5Q96RT8 1024 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 ROGDIQ9GZN7 287 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 UNC93B1Q9H1C4 597 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 FZD8Q9H461 694 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 GBA2Q9HCG7 927 aaPredicted RBP17.51■□□□□ 0.39
PTPRU-202ENST00000373779 MARCH2Q9P0N8 246 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 TRMUO75648 421 aaKnown RBP17.51■□□□□ 0.39
PTPRU-202ENST00000373779 GSNP06396 782 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 L1CAMP32004 1257 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 ATXN1P54253 815 aaKnown RBP17.51■□□□□ 0.39
PTPRU-202ENST00000373779 MPP1Q00013 466 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 NR1D2Q14995 579 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 ZNF618Q5T7W0 954 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 AFTPHQ6ULP2 937 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 ANKS3Q6ZW76 656 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 SEMA3CQ99985 751 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 RHOBTB2Q9BYZ6 727 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 GOLGA2P5Q9HBQ8 144 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 SLC17A6Q9P2U8 582 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 PPM1HQ9ULR3 514 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 SMIM28A0A1B0GU29 152 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 GNG14A0A1W2PPG7 69 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 RECQL5O94762 991 aaPredicted RBP17.51■□□□□ 0.39
PTPRU-202ENST00000373779 CCNA2P20248 432 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 ST8SIA6P61647 398 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 INTS6LQ5JSJ4 861 aaKnown RBP17.51■□□□□ 0.39
PTPRU-202ENST00000373779 PTCD2Q8WV60 388 aaKnown RBP17.51■□□□□ 0.39
PTPRU-202ENST00000373779 AGAP2Q99490 1192 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 TINF2Q9BSI4 451 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 SPATA16Q9BXB7 569 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 C6orf62Q9GZU0 229 aaPredicted RBP17.51■□□□□ 0.39
PTPRU-202ENST00000373779 ADAM7Q9H2U9 754 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 PNPLA8Q9NP80 782 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 MPP6Q9NZW5 540 aa17.51■□□□□ 0.39
PTPRU-202ENST00000373779 EPHX2P34913 555 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 BRMS1LQ5PSV4 323 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 SCIMPQ6UWF3 145 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 STX19Q8N4C7 294 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 PANX3Q96QZ0 392 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 IGSF9Q9P2J2 1179 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 POU1F1P28069 291 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 ST13P50502 369 aaKnown RBP17.5■□□□□ 0.39
PTPRU-202ENST00000373779 PRKG2Q13237 762 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 SPRED3Q2MJR0 410 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 SLC10A6Q3KNW5 377 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 SLC9B1Q4ZJI4 515 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 GPRIN3Q6ZVF9 776 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 FCRL2Q96LA5 508 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms