RNA–Protein interactions for RNA: ENST00000372873.8

SYNPO2L-201, Transcript of synaptopodin 2 like, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-201ENST00000372873 POLLQ9UGP5 575 aa11.31□□□□□ -0.6
SYNPO2L-201ENST00000372873 RNF11Q9Y3C5 154 aa11.31□□□□□ -0.6
SYNPO2L-201ENST00000372873 H0YJX3 145 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 EXTL3O43909 919 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 LSM8O95777 96 aaKnown RBP11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 CD48P09326 243 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 ABATP80404 500 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 NSUN2Q08J23 767 aaKnown RBP eCLIP11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 ZNF267Q14586 743 aaPredicted RBP11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 TRIP4Q15650 581 aaPredicted RBP11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 VPS72Q15906 364 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 TXNRD3NBQ6F5E7 133 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 EPGNQ6UW88 154 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 MIER2Q8N344 545 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 ZNF597Q96LX8 424 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 FEM1AQ9BSK4 669 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 NIF3L1Q9GZT8 377 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 POMKQ9H5K3 350 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 CISHQ9NSE2 258 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 SLC17A6Q9P2U8 582 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 SUCOQ9UBS9 1254 aaKnown RBP11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 ARFGEF2Q9Y6D5 1785 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 C9JVG2 144 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 ABCB7O75027 752 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 XYLBO75191 536 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 RECQL5O94762 991 aaPredicted RBP11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 IL1BP01584 269 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 NPR1P16066 1061 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 PTPN7P35236 360 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 PPP4R4Q6NUP7 873 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 TATDN1Q6P1N9 297 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 LYSMD3Q7Z3D4 306 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 CADM2Q8N3J6 435 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 SPATA6LQ8N4H0 392 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 GAD1Q99259 594 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 TUBA1CQ9BQE3 449 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 RTFDC1Q9BY42 306 aaPredicted RBP11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 CPNE5Q9HCH3 593 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 ZNF277Q9NRM2 450 aaPredicted RBP11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 GABBR1Q9UBS5 961 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 TEX264Q9Y6I9 313 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 NDUFB10O96000 172 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 ARP10275 920 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 FGF3P11487 239 aaPredicted RBP11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 UNGP13051 313 aaPredicted RBP11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 IL7RP16871 459 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 TSPAN8P19075 237 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 PPP4CP60510 307 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 NFIL3Q16649 462 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 PIGGQ5H8A4 983 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 CYP20A1Q6UW02 462 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 STX19Q8N4C7 294 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 MUS81Q96NY9 551 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 CNPY3Q9BT09 278 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 FUNDC2Q9BWH2 189 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 FSD1LQ9BXM9 530 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 MROQ9BYG7 248 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 RBM38Q9H0Z9 239 aaKnown RBP11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 POLR3FQ9H1D9 316 aaPredicted RBP11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 DYRK4Q9NR20 520 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 ING3Q9NXR8 418 aa11.3□□□□□ -0.6
SYNPO2L-201ENST00000372873 CASZ1Q86V15 1759 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 SOAT2O75908 522 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 CABYRO75952 493 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 ANGPTL1O95841 491 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 GTF2E2P29084 291 aaKnown RBP11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 KRT20P35900 424 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 MRPS5P82675 430 aaKnown RBP11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 QPRTQ15274 297 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 SLC35G1Q2M3R5 365 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 ATP6AP1LQ52LC2 224 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 AGAP9Q5VTM2 703 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 R3HCC1LQ7Z5L2 792 aaKnown RBP11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 AMIGO1Q86WK6 493 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 UBE2J2Q8N2K1 259 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 CAMKK1Q8N5S9 505 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 KBTBD8Q8NFY9 601 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 MCOLN3Q8TDD5 553 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 CCDC126Q96EE4 140 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 PAWRQ96IZ0 340 aaKnown RBP11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 TRIT1Q9H3H1 467 aaKnown RBP11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 DMAC2Q9NW81 257 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 XPR1Q9UBH6 696 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 CORINQ9Y5Q5 1042 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 U3KQV3 271 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 ADGRA2Q96PE1 1338 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 TMEM150BA6NC51 233 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 TMX2-CTNND1H3BSU7 103 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 ATG7O95352 703 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 CD247P20963 164 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 FMO4P31512 558 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 CCT8P50990 548 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 PIGFQ07326 219 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 SUZ12Q15022 739 aaKnown RBP11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 AGAP7PQ5VUJ5 663 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 ERAP2Q6P179 960 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 KCNMB4Q86W47 210 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 UNC5BQ8IZJ1 945 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 ANKRD52Q8NB46 1076 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms