RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 KLHDC7BQ96G42 594 aa20.21■□□□□ 0.83
TMEM53-205ENST00000372244 BMFQ96LC9 184 aa20.21■□□□□ 0.83
TMEM53-205ENST00000372244 FZD3Q9NPG1 666 aa20.21■□□□□ 0.83
TMEM53-205ENST00000372244 SALL4Q9UJQ4 1053 aa20.21■□□□□ 0.83
TMEM53-205ENST00000372244 REXO2Q9Y3B8 237 aaKnown RBP20.21■□□□□ 0.83
TMEM53-205ENST00000372244 RIOK3O14730 519 aaKnown RBP20.2■□□□□ 0.82
TMEM53-205ENST00000372244 MATN3O15232 486 aa20.2■□□□□ 0.82
TMEM53-205ENST00000372244 RAD51BO15315 384 aa20.2■□□□□ 0.82
TMEM53-205ENST00000372244 FAM193AP78312 1265 aa20.2■□□□□ 0.82
TMEM53-205ENST00000372244 BCL2L1Q07817 233 aa20.2■□□□□ 0.82
TMEM53-205ENST00000372244 ZNF235Q14590 738 aa20.2■□□□□ 0.82
TMEM53-205ENST00000372244 IFI16Q16666 785 aaKnown RBP20.2■□□□□ 0.82
TMEM53-205ENST00000372244 RALGPS1Q5JS13 557 aa20.2■□□□□ 0.82
TMEM53-205ENST00000372244 ZFYVE27Q5T4F4 411 aa20.2■□□□□ 0.82
TMEM53-205ENST00000372244 SLC9A4Q6AI14 798 aa20.2■□□□□ 0.82
TMEM53-205ENST00000372244 PLD5Q8N7P1 536 aa20.2■□□□□ 0.82
TMEM53-205ENST00000372244 NSMCE1Q8WV22 266 aa20.2■□□□□ 0.82
TMEM53-205ENST00000372244 MAML1Q92585 1016 aa20.2■□□□□ 0.82
TMEM53-205ENST00000372244 NUDCD1Q96RS6 583 aa20.2■□□□□ 0.82
TMEM53-205ENST00000372244 NOD2Q9HC29 1040 aa20.2■□□□□ 0.82
TMEM53-205ENST00000372244 PCDH12Q9NPG4 1184 aa20.2■□□□□ 0.82
TMEM53-205ENST00000372244 DDX56Q9NY93 547 aaKnown RBP20.2■□□□□ 0.82
TMEM53-205ENST00000372244 DTLQ9NZJ0 730 aa20.2■□□□□ 0.82
TMEM53-205ENST00000372244 PCOLCE2Q9UKZ9 415 aa20.2■□□□□ 0.82
TMEM53-205ENST00000372244 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.19■□□□□ 0.82
TMEM53-205ENST00000372244 TTC24A2A3L6 582 aaPredicted RBP20.19■□□□□ 0.82
TMEM53-205ENST00000372244 HTRA2O43464 458 aaPredicted RBP20.19■□□□□ 0.82
TMEM53-205ENST00000372244 MMP20O60882 483 aa20.19■□□□□ 0.82
TMEM53-205ENST00000372244 MX2P20592 715 aa20.19■□□□□ 0.82
TMEM53-205ENST00000372244 MMP13P45452 471 aa20.19■□□□□ 0.82
TMEM53-205ENST00000372244 CCT8P50990 548 aa20.19■□□□□ 0.82
TMEM53-205ENST00000372244 CLDN2P57739 230 aa20.19■□□□□ 0.82
TMEM53-205ENST00000372244 ELP6Q0PNE2 266 aa20.19■□□□□ 0.82
TMEM53-205ENST00000372244 TAZQ16635 292 aa20.19■□□□□ 0.82
TMEM53-205ENST00000372244 GCNT7Q6ZNI0 430 aa20.19■□□□□ 0.82
TMEM53-205ENST00000372244 BBS5Q8N3I7 341 aa20.19■□□□□ 0.82
TMEM53-205ENST00000372244 BAG1Q99933 345 aaPredicted RBP20.19■□□□□ 0.82
TMEM53-205ENST00000372244 MYOCQ99972 504 aa20.19■□□□□ 0.82
TMEM53-205ENST00000372244 GPR27Q9NS67 375 aa20.19■□□□□ 0.82
TMEM53-205ENST00000372244 DUSP10Q9Y6W6 482 aa20.19■□□□□ 0.82
TMEM53-205ENST00000372244 POM121BA6NF01 834 aa20.18■□□□□ 0.82
TMEM53-205ENST00000372244 BTNL10A8MVZ5 291 aa20.18■□□□□ 0.82
TMEM53-205ENST00000372244 FLRT2O43155 660 aa20.18■□□□□ 0.82
TMEM53-205ENST00000372244 SPOPO43791 374 aa20.18■□□□□ 0.82
TMEM53-205ENST00000372244 THEGLP0DJG4 465 aa20.18■□□□□ 0.82
TMEM53-205ENST00000372244 KCNA4P22459 653 aa20.18■□□□□ 0.82
TMEM53-205ENST00000372244 POLR2LP62875 67 aaKnown RBP20.18■□□□□ 0.82
TMEM53-205ENST00000372244 TRIP6Q15654 476 aaKnown RBP20.18■□□□□ 0.82
TMEM53-205ENST00000372244 OR13H1Q8NG92 308 aa20.18■□□□□ 0.82
TMEM53-205ENST00000372244 TPCN2Q8NHX9 752 aa20.18■□□□□ 0.82
TMEM53-205ENST00000372244 BAHD1Q8TBE0 780 aaPredicted RBP20.18■□□□□ 0.82
TMEM53-205ENST00000372244 SAP25Q8TEE9 199 aa20.18■□□□□ 0.82
TMEM53-205ENST00000372244 CALR3Q96L12 384 aaKnown RBP20.18■□□□□ 0.82
TMEM53-205ENST00000372244 LACRTQ9GZZ8 138 aa20.18■□□□□ 0.82
TMEM53-205ENST00000372244 GOLPH3Q9H4A6 298 aa20.18■□□□□ 0.82
TMEM53-205ENST00000372244 TPRP12270 2363 aaKnown RBP20.18■□□□□ 0.82
TMEM53-205ENST00000372244 YKT6O15498 198 aa20.18■□□□□ 0.82
TMEM53-205ENST00000372244 PSTPIP1O43586 416 aa20.18■□□□□ 0.82
TMEM53-205ENST00000372244 MAP3K6O95382 1288 aa20.18■□□□□ 0.82
TMEM53-205ENST00000372244 XPAP23025 273 aaPredicted RBP20.18■□□□□ 0.82
TMEM53-205ENST00000372244 MMP12P39900 470 aa20.18■□□□□ 0.82
TMEM53-205ENST00000372244 ARRB1P49407 418 aaPredicted RBP20.18■□□□□ 0.82
TMEM53-205ENST00000372244 ALG1LQ6GMV1 187 aa20.18■□□□□ 0.82
TMEM53-205ENST00000372244 TIGD7Q6NT04 549 aaPredicted RBP20.18■□□□□ 0.82
TMEM53-205ENST00000372244 C11orf63Q6NUN7 778 aa20.18■□□□□ 0.82
TMEM53-205ENST00000372244 Q6ZSR6 202 aa20.18■□□□□ 0.82
TMEM53-205ENST00000372244 GLRX5Q86SX6 157 aa20.18■□□□□ 0.82
TMEM53-205ENST00000372244 DCP2Q8IU60 420 aaKnown RBP20.18■□□□□ 0.82
TMEM53-205ENST00000372244 OXR1Q8N573 874 aa20.18■□□□□ 0.82
TMEM53-205ENST00000372244 DENND6BQ8NEG7 585 aa20.18■□□□□ 0.82
TMEM53-205ENST00000372244 CXorf40AQ8TE69 158 aa20.18■□□□□ 0.82
TMEM53-205ENST00000372244 SETD7Q8WTS6 366 aaKnown RBP20.18■□□□□ 0.82
TMEM53-205ENST00000372244 RNF25Q96BH1 459 aaPredicted RBP20.18■□□□□ 0.82
TMEM53-205ENST00000372244 HDAC11Q96DB2 347 aa20.18■□□□□ 0.82
TMEM53-205ENST00000372244 MAK16Q9BXY0 300 aaKnown RBP20.18■□□□□ 0.82
TMEM53-205ENST00000372244 SCUBE2Q9NQ36 999 aa20.18■□□□□ 0.82
TMEM53-205ENST00000372244 AMACRQ9UHK6 382 aa20.18■□□□□ 0.82
TMEM53-205ENST00000372244 BTBD3Q9Y2F9 522 aa20.18■□□□□ 0.82
TMEM53-205ENST00000372244 ATP8A1Q9Y2Q0 1164 aa20.18■□□□□ 0.82
TMEM53-205ENST00000372244 PCDHGC4Q9Y5F7 938 aa20.18■□□□□ 0.82
TMEM53-205ENST00000372244 SPAARA0A1B0GVQ0 90 aa20.17■□□□□ 0.82
TMEM53-205ENST00000372244 CFAP69A5D8W1 941 aa20.17■□□□□ 0.82
TMEM53-205ENST00000372244 PJA2O43164 708 aa20.17■□□□□ 0.82
TMEM53-205ENST00000372244 SOCS5O75159 536 aa20.17■□□□□ 0.82
TMEM53-205ENST00000372244 TM7SF2O76062 418 aa20.17■□□□□ 0.82
TMEM53-205ENST00000372244 CCNB1P14635 433 aa20.17■□□□□ 0.82
TMEM53-205ENST00000372244 PMLP29590 882 aa20.17■□□□□ 0.82
TMEM53-205ENST00000372244 CDKN2BP42772 138 aa20.17■□□□□ 0.82
TMEM53-205ENST00000372244 MAXP61244 160 aa20.17■□□□□ 0.82
TMEM53-205ENST00000372244 SIM1P81133 766 aaPredicted RBP20.17■□□□□ 0.82
TMEM53-205ENST00000372244 CFAP58Q5T655 872 aa20.17■□□□□ 0.82
TMEM53-205ENST00000372244 ERAP2Q6P179 960 aa20.17■□□□□ 0.82
TMEM53-205ENST00000372244 MFSD7Q6UXD7 560 aa20.17■□□□□ 0.82
TMEM53-205ENST00000372244 KYAT3Q6YP21 454 aaKnown RBP20.17■□□□□ 0.82
TMEM53-205ENST00000372244 SLC22A18ASQ8N1D0 253 aa20.17■□□□□ 0.82
TMEM53-205ENST00000372244 SPC24Q8NBT2 197 aa20.17■□□□□ 0.82
TMEM53-205ENST00000372244 RHBDD1Q8TEB9 315 aa20.17■□□□□ 0.82
TMEM53-205ENST00000372244 WRAP53Q9BUR4 548 aaKnown RBP20.17■□□□□ 0.82
TMEM53-205ENST00000372244 NT5MQ9NPB1 228 aa20.17■□□□□ 0.82
TMEM53-205ENST00000372244 TMEM131Q92545 1883 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms