RNA–Protein interactions for RNA: ENST00000372017.3

SNCG-202, Transcript of synuclein gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCG, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-202ENST00000372017 BCL2L1Q07817 233 aa12.7□□□□□ -0.38
SNCG-202ENST00000372017 DUOXA1Q1HG43 343 aa12.7□□□□□ -0.38
SNCG-202ENST00000372017 ZNF284Q2VY69 593 aa12.7□□□□□ -0.38
SNCG-202ENST00000372017 TMEM259Q4ZIN3 620 aa12.7□□□□□ -0.38
SNCG-202ENST00000372017 TIGD7Q6NT04 549 aaPredicted RBP12.7□□□□□ -0.38
SNCG-202ENST00000372017 KDM7AQ6ZMT4 941 aa12.7□□□□□ -0.38
SNCG-202ENST00000372017 TTC7BQ86TV6 843 aa12.7□□□□□ -0.38
SNCG-202ENST00000372017 ZC3H18Q86VM9 953 aaKnown RBP12.7□□□□□ -0.38
SNCG-202ENST00000372017 TRIM69Q86WT6 500 aa12.7□□□□□ -0.38
SNCG-202ENST00000372017 OR2I1PQ8NGU4 316 aa12.7□□□□□ -0.38
SNCG-202ENST00000372017 HCAR2Q8TDS4 363 aa12.7□□□□□ -0.38
SNCG-202ENST00000372017 ZNF641Q96N77 438 aaPredicted RBP12.7□□□□□ -0.38
SNCG-202ENST00000372017 TUBGCP5Q96RT8 1024 aa12.7□□□□□ -0.38
SNCG-202ENST00000372017 SEMA3CQ99985 751 aa12.7□□□□□ -0.38
SNCG-202ENST00000372017 PREBQ9HCU5 417 aa12.7□□□□□ -0.38
SNCG-202ENST00000372017 FZD3Q9NPG1 666 aa12.7□□□□□ -0.38
SNCG-202ENST00000372017 SCUBE2Q9NQ36 999 aa12.7□□□□□ -0.38
SNCG-202ENST00000372017 CDV3Q9UKY7 258 aaKnown RBP12.7□□□□□ -0.38
SNCG-202ENST00000372017 CA5BQ9Y2D0 317 aa12.7□□□□□ -0.38
SNCG-202ENST00000372017 TRPM6Q9BX84 2022 aa12.7□□□□□ -0.38
SNCG-202ENST00000372017 SPTBN2O15020 2390 aa12.69□□□□□ -0.38
SNCG-202ENST00000372017 USP27XA6NNY8 438 aa12.69□□□□□ -0.38
SNCG-202ENST00000372017 MIF4GDA9UHW6 222 aaKnown RBP12.69□□□□□ -0.38
SNCG-202ENST00000372017 APOC4-APOC2K7ER74 178 aa12.69□□□□□ -0.38
SNCG-202ENST00000372017 CDX4O14627 284 aaPredicted RBP12.69□□□□□ -0.38
SNCG-202ENST00000372017 KHNYNO15037 678 aaKnown RBP12.69□□□□□ -0.38
SNCG-202ENST00000372017 RAD51BO15315 384 aa12.69□□□□□ -0.38
SNCG-202ENST00000372017 BCAT2O15382 392 aaPredicted RBP12.69□□□□□ -0.38
SNCG-202ENST00000372017 PCDH8O95206 1070 aa12.69□□□□□ -0.38
SNCG-202ENST00000372017 APOC2P02655 101 aa12.69□□□□□ -0.38
SNCG-202ENST00000372017 PDHA1P08559 390 aa12.69□□□□□ -0.38
SNCG-202ENST00000372017 SERPINF2P08697 491 aa12.69□□□□□ -0.38
SNCG-202ENST00000372017 PRLRP16471 622 aa12.69□□□□□ -0.38
SNCG-202ENST00000372017 SDHBP21912 280 aa12.69□□□□□ -0.38
SNCG-202ENST00000372017 CD68P34810 354 aaPredicted RBP12.69□□□□□ -0.38
SNCG-202ENST00000372017 HSPA9P38646 679 aaKnown RBP12.69□□□□□ -0.38
SNCG-202ENST00000372017 NR2C2P49116 596 aa12.69□□□□□ -0.38
SNCG-202ENST00000372017 CSNK1EP49674 416 aaKnown RBP12.69□□□□□ -0.38
SNCG-202ENST00000372017 AP1S1P61966 158 aa12.69□□□□□ -0.38
SNCG-202ENST00000372017 OTUD4Q01804 1114 aaKnown RBP12.69□□□□□ -0.38
SNCG-202ENST00000372017 ITKQ08881 620 aa12.69□□□□□ -0.38
SNCG-202ENST00000372017 WASHC5Q12768 1159 aa12.69□□□□□ -0.38
SNCG-202ENST00000372017 KLF1Q13351 362 aaPredicted RBP12.69□□□□□ -0.38
SNCG-202ENST00000372017 PDK1Q15118 436 aa12.69□□□□□ -0.38
SNCG-202ENST00000372017 NOMO1Q15155 1222 aa12.69□□□□□ -0.38
SNCG-202ENST00000372017 UGP2Q16851 508 aa12.69□□□□□ -0.38
SNCG-202ENST00000372017 HORMAD1Q86X24 394 aa12.69□□□□□ -0.38
SNCG-202ENST00000372017 ACTL9Q8TC94 416 aa12.69□□□□□ -0.38
SNCG-202ENST00000372017 NSMCE1Q8WV22 266 aa12.69□□□□□ -0.38
SNCG-202ENST00000372017 P3H4Q92791 437 aa12.69□□□□□ -0.38
SNCG-202ENST00000372017 CNTNAP3BQ96NU0 1288 aa12.69□□□□□ -0.38
SNCG-202ENST00000372017 MYOCQ99972 504 aa12.69□□□□□ -0.38
SNCG-202ENST00000372017 CNTNAP3Q9BZ76 1288 aa12.69□□□□□ -0.38
SNCG-202ENST00000372017 POLR1EQ9GZS1 481 aaKnown RBP12.69□□□□□ -0.38
SNCG-202ENST00000372017 ATP13A3Q9H7F0 1226 aa12.69□□□□□ -0.38
SNCG-202ENST00000372017 CAAP1Q9H8G2 361 aa12.69□□□□□ -0.38
SNCG-202ENST00000372017 PCDH12Q9NPG4 1184 aa12.69□□□□□ -0.38
SNCG-202ENST00000372017 PYCARDQ9ULZ3 195 aa12.69□□□□□ -0.38
SNCG-202ENST00000372017 SLC6A14Q9UN76 642 aa12.69□□□□□ -0.38
SNCG-202ENST00000372017 EFR3BQ9Y2G0 817 aa12.69□□□□□ -0.38
SNCG-202ENST00000372017 A0A0U1RQS6 177 aa12.68□□□□□ -0.38
SNCG-202ENST00000372017 A0A1B0GTW7 788 aa12.68□□□□□ -0.38
SNCG-202ENST00000372017 A0A1B0GVT2 93 aa12.68□□□□□ -0.38
SNCG-202ENST00000372017 A0A1W2PR77 199 aa12.68□□□□□ -0.38
SNCG-202ENST00000372017 IGLON5A6NGN9 336 aa12.68□□□□□ -0.38
SNCG-202ENST00000372017 UPK3BL1B0FP48 263 aa12.68□□□□□ -0.38
SNCG-202ENST00000372017 UPK3BL2E5RIL1 263 aa12.68□□□□□ -0.38
SNCG-202ENST00000372017 RIOK3O14730 519 aaKnown RBP12.68□□□□□ -0.38
SNCG-202ENST00000372017 PPP1R12AO14974 1030 aaPredicted RBP12.68□□□□□ -0.38
SNCG-202ENST00000372017 SLC31A1O15431 190 aa12.68□□□□□ -0.38
SNCG-202ENST00000372017 FZD6O60353 706 aa12.68□□□□□ -0.38
SNCG-202ENST00000372017 MMP20O60882 483 aa12.68□□□□□ -0.38
SNCG-202ENST00000372017 PAK4O96013 591 aaPredicted RBP12.68□□□□□ -0.38
SNCG-202ENST00000372017 PRLP01236 227 aa12.68□□□□□ -0.38
SNCG-202ENST00000372017 CFIP05156 583 aa12.68□□□□□ -0.38
SNCG-202ENST00000372017 PTMAP06454 111 aaKnown RBP12.68□□□□□ -0.38
SNCG-202ENST00000372017 ENGP17813 658 aa12.68□□□□□ -0.38
SNCG-202ENST00000372017 GM2AP17900 193 aa12.68□□□□□ -0.38
SNCG-202ENST00000372017 PTPN3P26045 913 aa12.68□□□□□ -0.38
SNCG-202ENST00000372017 SERPINA4P29622 427 aa12.68□□□□□ -0.38
SNCG-202ENST00000372017 HOXD12P35452 270 aa12.68□□□□□ -0.38
SNCG-202ENST00000372017 SKOR1P84550 965 aa12.68□□□□□ -0.38
SNCG-202ENST00000372017 RALGDSQ12967 914 aa12.68□□□□□ -0.38
SNCG-202ENST00000372017 GRM3Q14832 879 aa12.68□□□□□ -0.38
SNCG-202ENST00000372017 TMEM52BQ4KMG9 183 aa12.68□□□□□ -0.38
SNCG-202ENST00000372017 NEK5Q6P3R8 708 aa12.68□□□□□ -0.38
SNCG-202ENST00000372017 PRPF39Q86UA1 669 aaKnown RBP12.68□□□□□ -0.38
SNCG-202ENST00000372017 GPR161Q8N6U8 529 aaKnown RBP12.68□□□□□ -0.38
SNCG-202ENST00000372017 UBL4BQ8N7F7 174 aa12.68□□□□□ -0.38
SNCG-202ENST00000372017 TFB1MQ8WVM0 346 aaKnown RBP12.68□□□□□ -0.38
SNCG-202ENST00000372017 PIH1D2Q8WWB5 315 aa12.68□□□□□ -0.38
SNCG-202ENST00000372017 RAB7BQ96AH8 199 aa12.68□□□□□ -0.38
SNCG-202ENST00000372017 AGAP3Q96P47 875 aa12.68□□□□□ -0.38
SNCG-202ENST00000372017 QKIQ96PU8 341 aaKnown RBP eCLIP12.68□□□□□ -0.38
SNCG-202ENST00000372017 TLR10Q9BXR5 811 aa12.68□□□□□ -0.38
SNCG-202ENST00000372017 TRMT1Q9NXH9 659 aaKnown RBP12.68□□□□□ -0.38
SNCG-202ENST00000372017 SEPT10Q9P0V9 454 aa12.68□□□□□ -0.38
SNCG-202ENST00000372017 AMACRQ9UHK6 382 aa12.68□□□□□ -0.38
SNCG-202ENST00000372017 R3HDM2Q9Y2K5 976 aaKnown RBP12.68□□□□□ -0.38
SNCG-202ENST00000372017 COQ6Q9Y2Z9 468 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms