RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 NMRK1Q9NWW6 199 aa20■□□□□ 0.79
LHX3-202ENST00000371748 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20■□□□□ 0.79
LHX3-202ENST00000371748 H3BNC9 293 aa20■□□□□ 0.79
LHX3-202ENST00000371748 TSPAN3O60637 253 aa20■□□□□ 0.79
LHX3-202ENST00000371748 CD151P48509 253 aa20■□□□□ 0.79
LHX3-202ENST00000371748 CDH4P55283 916 aa20■□□□□ 0.79
LHX3-202ENST00000371748 ABCE1P61221 599 aaKnown RBP20■□□□□ 0.79
LHX3-202ENST00000371748 TSNAXIP1Q2TAA8 658 aa20■□□□□ 0.79
LHX3-202ENST00000371748 ZNF789Q5FWF6 425 aa20■□□□□ 0.79
LHX3-202ENST00000371748 KLHDC10Q6PID8 442 aa20■□□□□ 0.79
LHX3-202ENST00000371748 NAPRTQ6XQN6 538 aa20■□□□□ 0.79
LHX3-202ENST00000371748 WDR75Q8IWA0 830 aaKnown RBP20■□□□□ 0.79
LHX3-202ENST00000371748 PLD4Q96BZ4 506 aa20■□□□□ 0.79
LHX3-202ENST00000371748 FAM136AQ96C01 138 aa20■□□□□ 0.79
LHX3-202ENST00000371748 ZNF689Q96CS4 500 aaPredicted RBP20■□□□□ 0.79
LHX3-202ENST00000371748 ELMO2Q96JJ3 720 aa20■□□□□ 0.79
LHX3-202ENST00000371748 ZNF333Q96JL9 665 aa20■□□□□ 0.79
LHX3-202ENST00000371748 RILPQ96NA2 401 aa20■□□□□ 0.79
LHX3-202ENST00000371748 RUVBL2Q9Y230 463 aaKnown RBP20■□□□□ 0.79
LHX3-202ENST00000371748 ANKRD6Q9Y2G4 727 aa20■□□□□ 0.79
LHX3-202ENST00000371748 KCTD3Q9Y597 815 aa20■□□□□ 0.79
LHX3-202ENST00000371748 LOC285095A0A1B0GVY8 99 aa19.99■□□□□ 0.79
LHX3-202ENST00000371748 GSC2O15499 205 aa19.99■□□□□ 0.79
LHX3-202ENST00000371748 SLC12A1Q13621 1099 aa19.99■□□□□ 0.79
LHX3-202ENST00000371748 RABGAP1LQ5R372 815 aa19.99■□□□□ 0.79
LHX3-202ENST00000371748 TPGS2Q68CL5 300 aa19.99■□□□□ 0.79
LHX3-202ENST00000371748 CNSTQ6PJW8 725 aa19.99■□□□□ 0.79
LHX3-202ENST00000371748 SPNS2Q8IVW8 549 aa19.99■□□□□ 0.79
LHX3-202ENST00000371748 PPP4R1Q8TF05 950 aa19.99■□□□□ 0.79
LHX3-202ENST00000371748 IFT43Q96FT9 208 aa19.99■□□□□ 0.79
LHX3-202ENST00000371748 MYRFLQ96LU7 910 aa19.99■□□□□ 0.79
LHX3-202ENST00000371748 UNKQ9C0B0 810 aaKnown RBP19.99■□□□□ 0.79
LHX3-202ENST00000371748 CRISPLD2Q9H0B8 497 aa19.99■□□□□ 0.79
LHX3-202ENST00000371748 MAGEH1Q9H213 219 aa19.99■□□□□ 0.79
LHX3-202ENST00000371748 STOML1Q9UBI4 398 aa19.99■□□□□ 0.79
LHX3-202ENST00000371748 LTBP2Q14767 1821 aa19.99■□□□□ 0.79
LHX3-202ENST00000371748 SCAMP3O14828 347 aaKnown RBP19.99■□□□□ 0.79
LHX3-202ENST00000371748 RAB10P61026 200 aa19.99■□□□□ 0.79
LHX3-202ENST00000371748 CDK18Q07002 472 aa19.99■□□□□ 0.79
LHX3-202ENST00000371748 TWF1Q12792 350 aa19.99■□□□□ 0.79
LHX3-202ENST00000371748 BTG3Q14201 252 aaPredicted RBP19.99■□□□□ 0.79
LHX3-202ENST00000371748 GALNT3Q14435 633 aa19.99■□□□□ 0.79
LHX3-202ENST00000371748 ACSBG2Q5FVE4 666 aa19.99■□□□□ 0.79
LHX3-202ENST00000371748 PTAR1Q7Z6K3 402 aaPredicted RBP19.99■□□□□ 0.79
LHX3-202ENST00000371748 CENPLQ8N0S6 344 aaPredicted RBP19.99■□□□□ 0.79
LHX3-202ENST00000371748 SPATA6LQ8N4H0 392 aa19.99■□□□□ 0.79
LHX3-202ENST00000371748 ZNF784Q8NCA9 323 aaPredicted RBP19.99■□□□□ 0.79
LHX3-202ENST00000371748 OR6Y1Q8NGX8 325 aa19.99■□□□□ 0.79
LHX3-202ENST00000371748 MOCOSQ96EN8 888 aa19.99■□□□□ 0.79
LHX3-202ENST00000371748 NSL1Q96IY1 281 aa19.99■□□□□ 0.79
LHX3-202ENST00000371748 SCYL1Q96KG9 808 aa19.99■□□□□ 0.79
LHX3-202ENST00000371748 TSNARE1Q96NA8 513 aa19.99■□□□□ 0.79
LHX3-202ENST00000371748 ACE2Q9BYF1 805 aaPredicted RBP19.99■□□□□ 0.79
LHX3-202ENST00000371748 ACSS2Q9NR19 701 aa19.99■□□□□ 0.79
LHX3-202ENST00000371748 SPATS2LQ9NUQ6 558 aaKnown RBP19.99■□□□□ 0.79
LHX3-202ENST00000371748 SMPD4Q9NXE4 827 aa19.99■□□□□ 0.79
LHX3-202ENST00000371748 AGO1Q9UL18 857 aaKnown RBP19.99■□□□□ 0.79
LHX3-202ENST00000371748 PRRG1O14668 218 aa19.98■□□□□ 0.79
LHX3-202ENST00000371748 NVLO15381 856 aaKnown RBP19.98■□□□□ 0.79
LHX3-202ENST00000371748 STMN1P16949 149 aa19.98■□□□□ 0.79
LHX3-202ENST00000371748 ITGB8P26012 769 aa19.98■□□□□ 0.79
LHX3-202ENST00000371748 ARSDP51689 593 aa19.98■□□□□ 0.79
LHX3-202ENST00000371748 SESN3P58005 492 aa19.98■□□□□ 0.79
LHX3-202ENST00000371748 TAS2R39P59534 338 aa19.98■□□□□ 0.79
LHX3-202ENST00000371748 KLC1Q07866 573 aa19.98■□□□□ 0.79
LHX3-202ENST00000371748 MUM1Q2TAK8 710 aa19.98■□□□□ 0.79
LHX3-202ENST00000371748 C11orf91Q3C1V1 193 aa19.98■□□□□ 0.79
LHX3-202ENST00000371748 C16orf59Q7L2K0 433 aa19.98■□□□□ 0.79
LHX3-202ENST00000371748 TMEM151AQ8N4L1 468 aa19.98■□□□□ 0.79
LHX3-202ENST00000371748 CFAP61Q8NHU2 1237 aa19.98■□□□□ 0.79
LHX3-202ENST00000371748 NRG4Q8WWG1 115 aa19.98■□□□□ 0.79
LHX3-202ENST00000371748 NDNQ99608 321 aa19.98■□□□□ 0.79
LHX3-202ENST00000371748 BEGAINQ9BUH8 593 aa19.98■□□□□ 0.79
LHX3-202ENST00000371748 ACOT9Q9Y305 439 aa19.98■□□□□ 0.79
LHX3-202ENST00000371748 CLTBP09497 229 aa19.98■□□□□ 0.79
LHX3-202ENST00000371748 SBK3P0C264 359 aa19.98■□□□□ 0.79
LHX3-202ENST00000371748 RBM20Q5T481 1227 aaKnown RBP19.98■□□□□ 0.79
LHX3-202ENST00000371748 OR6P1Q8NGX9 317 aa19.98■□□□□ 0.79
LHX3-202ENST00000371748 HERC2P3Q9BVR0 1158 aa19.98■□□□□ 0.79
LHX3-202ENST00000371748 RC3H2Q9HBD1 1191 aaKnown RBP19.98■□□□□ 0.79
LHX3-202ENST00000371748 HSFX1Q9UBD0 423 aa19.98■□□□□ 0.79
LHX3-202ENST00000371748 MROH6A6NGR9 719 aa19.97■□□□□ 0.79
LHX3-202ENST00000371748 OR51F1A6NGY5 319 aa19.97■□□□□ 0.79
LHX3-202ENST00000371748 BUD23O43709 281 aaKnown RBP19.97■□□□□ 0.79
LHX3-202ENST00000371748 URODP06132 367 aa19.97■□□□□ 0.79
LHX3-202ENST00000371748 PIRTP0C851 137 aa19.97■□□□□ 0.79
LHX3-202ENST00000371748 VHLP40337 213 aa19.97■□□□□ 0.79
LHX3-202ENST00000371748 ALDH18A1P54886 795 aaKnown RBP19.97■□□□□ 0.79
LHX3-202ENST00000371748 VEPH1Q14D04 833 aa19.97■□□□□ 0.79
LHX3-202ENST00000371748 RCN1Q15293 331 aa19.97■□□□□ 0.79
LHX3-202ENST00000371748 C1orf53Q5VUE5 145 aa19.97■□□□□ 0.79
LHX3-202ENST00000371748 MAVSQ7Z434 540 aa19.97■□□□□ 0.79
LHX3-202ENST00000371748 LDB1Q86U70 411 aaPredicted RBP19.97■□□□□ 0.79
LHX3-202ENST00000371748 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.97■□□□□ 0.79
LHX3-202ENST00000371748 BLOC1S5Q8TDH9 187 aa19.97■□□□□ 0.79
LHX3-202ENST00000371748 HDAC10Q969S8 669 aa19.97■□□□□ 0.79
LHX3-202ENST00000371748 NXNL1Q96CM4 212 aa19.97■□□□□ 0.79
LHX3-202ENST00000371748 EXOC2Q96KP1 924 aa19.97■□□□□ 0.79
LHX3-202ENST00000371748 ZNF599Q96NL3 588 aa19.97■□□□□ 0.79
LHX3-202ENST00000371748 MAP3K13O43283 966 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms