RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 YIPF2Q9BWQ6 316 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 BTBD19C9JJ37 291 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 PEX1O43933 1283 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 CLDN11O75508 207 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 ZMPSTE24O75844 475 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 PCDH8O95206 1070 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 CD48P09326 243 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 RHOQP17081 205 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 ABL2P42684 1182 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 LIMK2P53671 638 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 SMAD3P84022 425 aaKnown RBP11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 ACOX1Q15067 660 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 PARP15Q460N3 678 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 SETMARQ53H47 684 aaPredicted RBP11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 INTS11Q5TA45 600 aaKnown RBP11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 CLVS1Q8IUQ0 354 aaPredicted RBP11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 KRT78Q8N1N4 520 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 ZNF276Q8N554 614 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 SLC35B2Q8TB61 432 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 DQX1Q8TE96 717 aaKnown RBP11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 UBE2E3Q969T4 207 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 QRFPRQ96P65 431 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 GBA3Q9H227 469 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 TRAF6Q9Y4K3 522 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 COL14A1Q05707 1796 aaKnown RBP11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 VNN1O95497 513 aa11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 PABPC1P11940 636 aaKnown RBP11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 PSMB9P28065 219 aa11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 ALDH6A1Q02252 535 aaKnown RBP11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 KLF10Q13118 480 aa11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 KCTD19Q17RG1 926 aaPredicted RBP11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 UTP15Q8TED0 518 aaKnown RBP11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 ACBD6Q9BR61 282 aa11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 TRAV19A0A0A6YYK7 116 aa11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 SMIM31A0A1B0GVY4 71 aa11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 PDZK1P1A8MUH7 402 aa11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 TREHO43280 583 aa11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 DUSP11O75319 330 aaKnown RBP11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 HNRNPLP14866 589 aaKnown RBP eCLIP11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 PURAQ00577 322 aaKnown RBP11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 CCDC28BQ9BUN5 200 aa11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 TM6SF2Q9BZW4 377 aa11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 SEMA6AQ9H2E6 1030 aa11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 ATAD3AQ9NVI7 634 aa11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 TMEM59LQ9UK28 342 aa11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 C22orf31O95567 290 aa11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 GSTM1P09488 218 aa11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 ADSLP30566 484 aaPredicted RBP11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 GPD2P43304 727 aa11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 PSMD5Q16401 504 aa11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 NRF1Q16656 503 aa11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 MTSS1LQ765P7 747 aa11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 CMASQ8NFW8 434 aaPredicted RBP11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 ZFYVE19Q96K21 471 aa11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 ZFP42Q96MM3 310 aa11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 RNF208Q9H0X6 261 aa11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 REEP1Q9H902 201 aa11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 EIF2B3Q9NR50 452 aaKnown RBP11.92□□□□□ -0.5
DEPDC1-201ENST00000370966 MAGEC1O60732 1142 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 IMPDH2P12268 514 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 PRKAR2AP13861 404 aaKnown RBP11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 SCNN1AP37088 669 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 ALDH9A1P49189 494 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 TPGS1Q6ZTW0 290 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 SLC24A5Q71RS6 500 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 CDYL2Q8N8U2 506 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 PCDH19Q8TAB3 1148 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 OSBPL7Q9BZF2 842 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 OSBPL6Q9BZF3 934 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 ITM2BQ9Y287 266 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 A0A0G2JLL6 359 aaPredicted RBP11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 BBIP1A8MTZ0 92 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 TM7SF2O76062 418 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 ZBTB48P10074 688 aaPredicted RBP11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 HOXB6P17509 224 aaKnown RBP11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 RPL5P46777 297 aaKnown RBP11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 PRRT2Q7Z6L0 340 aaPredicted RBP11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 PIGWQ7Z7B1 504 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 RBFAQ8N0V3 343 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 MARK4Q96L34 752 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 TBCDQ9BTW9 1192 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 SLC4A5Q9BY07 1137 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 CAB39LQ9H9S4 337 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 C3orf18Q9UK00 162 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 SLC27A5Q9Y2P5 690 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 C1orf232A0A0U1RR37 186 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 ATP6AP2A0A1C7CYW4 349 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 SLC28A1O00337 649 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 PLIN3O60664 434 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 FAM20BO75063 409 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 ATP6AP2O75787 350 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 IPO13O94829 963 aaKnown RBP11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 LRIG2O94898 1065 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 BMP10O95393 424 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 PIRTP0C851 137 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 COX7A2P14406 83 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 SLC16A1P53985 500 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 SGCGQ13326 291 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms