RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 ARCQ7LC44 396 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 BNIPLQ7Z465 357 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 ANKS1BQ7Z6G8 1248 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 SLCO6A1Q86UG4 719 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 NUP93Q8N1F7 819 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 ZNF610Q8N9Z0 462 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 BHLHE22Q8NFJ8 381 aaPredicted RBP3.67□□□□□ -1.82
MCF2-202ENST00000370573 IRGQQ8WZA9 623 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 NT5C3BQ969T7 300 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 KIAA1191Q96A73 305 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 FAM149B1Q96BN6 582 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 MS4A14Q96JA4 679 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 PEBP4Q96S96 227 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 TCF25Q9BQ70 676 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 JAM3Q9BX67 310 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 MAGEB5Q9BZ81 275 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 L2HGDHQ9H9P8 463 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 CYP4F11Q9HBI6 524 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 TLR9Q9NR96 1032 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.67□□□□□ -1.82
MCF2-202ENST00000370573 CATSPERZQ9NTU4 200 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.67□□□□□ -1.82
MCF2-202ENST00000370573 STK39Q9UEW8 545 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 EDARQ9UNE0 448 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 SCML2Q9UQR0 700 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 RWDD3Q9Y3V2 267 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 PCDHA3Q9Y5H8 950 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 SAR1BQ9Y6B6 198 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 ARID1BQ8NFD5 2236 aaPredicted RBP3.67□□□□□ -1.82
MCF2-202ENST00000370573 LAMA3Q16787 3333 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 CLASP2O75122 1294 aaKnown RBP3.66□□□□□ -1.82
MCF2-202ENST00000370573 NDUFS2O75306 463 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 ENDOD1O94919 500 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 ZDHHC11BP0C7U3 371 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 MSL3P1P0C860 447 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 KRT15P19012 456 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 GLDCP23378 1020 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 TACR1P25103 407 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 KLRC2P26717 231 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 YWHAQP27348 245 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 MIPP30301 263 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 VIPR1P32241 457 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 CA8P35219 290 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 CTNNA1P35221 906 aaKnown RBP3.66□□□□□ -1.82
MCF2-202ENST00000370573 GRK3P35626 688 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 TUFMP49411 452 aaKnown RBP3.66□□□□□ -1.82
MCF2-202ENST00000370573 HDAC4P56524 1084 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 YWHAGP61981 247 aaKnown RBP eCLIP3.66□□□□□ -1.82
MCF2-202ENST00000370573 IRF9Q00978 393 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 SLC25A11Q02978 314 aaKnown RBP3.66□□□□□ -1.82
MCF2-202ENST00000370573 UBE3AQ05086 875 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 SLC20A2Q08357 652 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 TAF10Q12962 218 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 SMC1AQ14683 1233 aaKnown RBP3.66□□□□□ -1.82
MCF2-202ENST00000370573 DCAF6Q58WW2 860 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 GALNT18Q6P9A2 607 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 DENND5BQ6ZUT9 1274 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 ZDHHC14Q8IZN3 488 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 MIER2Q8N344 545 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 CAMKK1Q8N5S9 505 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 PPM1NQ8N819 430 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 FAM172AQ8WUF8 416 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 SLC22A17Q8WUG5 538 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 ARNTL2Q8WYA1 636 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 RIPOR3Q96MK2 946 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 SAMD11Q96NU1 681 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 NPY6RQ99463 290 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 BOCQ9BWV1 1114 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 TTLL2Q9BWV7 592 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 GCM1Q9NP62 436 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 CD320Q9NPF0 282 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 ENTPD7Q9NQZ7 604 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 COMMD8Q9NX08 183 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 SIRT5Q9NXA8 310 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 PRR13Q9NZ81 148 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 GPRC5BQ9NZH0 403 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 HSFX1Q9UBD0 423 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 PCSK1NQ9UHG2 260 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 MSRAQ9UJ68 235 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 NUDT5Q9UKK9 219 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 SSX2IPQ9Y2D8 614 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 NR2E1Q9Y466 385 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 YIPF1Q9Y548 306 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 INSL5Q9Y5Q6 135 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 COL4A4P53420 1690 aaPredicted RBP3.66□□□□□ -1.82
MCF2-202ENST00000370573 PLXNA3P51805 1871 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 ZNF638Q14966 1978 aaKnown RBP3.66□□□□□ -1.82
MCF2-202ENST00000370573 MYO9BQ13459 2157 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 REV3LO60673 3130 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 DOCK6Q96HP0 2047 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 TCRBV7S2A1N4TA0A589 114 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 C3orf70A6NLC5 250 aaPredicted RBP3.66□□□□□ -1.82
MCF2-202ENST00000370573 MIF4GDA9UHW6 222 aaKnown RBP3.66□□□□□ -1.82
MCF2-202ENST00000370573 RASA4BC9J798 803 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 PI4K2BG5E9Z4 385 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 I6L893 689 aaPredicted RBP3.66□□□□□ -1.82
MCF2-202ENST00000370573 PRRG1O14668 218 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 PER2O15055 1255 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 RASA4O43374 803 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 B3GALT2O43825 422 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms