RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 WDR87Q6ZQQ6 2873 aa13.89□□□□□ -0.19
SSR4-202ENST00000370085 RALGAPA1Q6GYQ0 2036 aa13.89□□□□□ -0.19
SSR4-202ENST00000370085 RIF1Q5UIP0 2472 aaKnown RBP13.88□□□□□ -0.19
SSR4-202ENST00000370085 TSPAN11A1L157 253 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 CTAGE9A4FU28 777 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 GOLGA6CA6NDK9 693 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 GOLGA6BA6NDN3 693 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 USP27XA6NNY8 438 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 PLK4O00444 970 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 CES2O00748 559 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 KCNN4O15554 427 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 CPP00450 1065 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 GOLGA6DP0CG33 693 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 TCP1P17987 556 aaKnown RBP13.88□□□□□ -0.19
SSR4-202ENST00000370085 RBL1P28749 1068 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 STIP1P31948 543 aaKnown RBP13.88□□□□□ -0.19
SSR4-202ENST00000370085 CXCR5P32302 372 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 PTGER3P43115 390 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 METAP1P53582 386 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 RPL26P61254 145 aaKnown RBP13.88□□□□□ -0.19
SSR4-202ENST00000370085 DSC2Q02487 901 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 PRPSAP1Q14558 356 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 SLC14A2Q15849 920 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 USP45Q70EL2 814 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 TRIM69Q86WT6 500 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.88□□□□□ -0.19
SSR4-202ENST00000370085 DEFB119Q8N690 84 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 CXorf40AQ8TE69 158 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 SPOCK2Q92563 424 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 PIGKQ92643 395 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 SKA1Q96BD8 255 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 ECHDC3Q96DC8 303 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 NAPGQ99747 312 aaPredicted RBP13.88□□□□□ -0.19
SSR4-202ENST00000370085 HERPUD2Q9BSE4 406 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 C1QTNF7Q9BXJ2 289 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 MIR1-1HGQ9H1L0 117 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 C6orf106Q9H6K1 298 aaPredicted RBP13.88□□□□□ -0.19
SSR4-202ENST00000370085 GLOD4Q9HC38 313 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 GOLGA6AQ9NYA3 693 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 PHTF1Q9UMS5 762 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 RPL26L1Q9UNX3 145 aaKnown RBP13.88□□□□□ -0.19
SSR4-202ENST00000370085 DMTF1Q9Y222 760 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.88□□□□□ -0.19
SSR4-202ENST00000370085 PCDHB9Q9Y5E1 797 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 PCDHGC4Q9Y5F7 938 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 RAI2Q9Y5P3 530 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 FADS3Q9Y5Q0 445 aa13.88□□□□□ -0.19
SSR4-202ENST00000370085 TRPM6Q9BX84 2022 aa13.87□□□□□ -0.19
SSR4-202ENST00000370085 GOLGA6L10A0A0M3HER8 536 aa13.87□□□□□ -0.19
SSR4-202ENST00000370085 PGRMC1O00264 195 aaKnown RBP13.87□□□□□ -0.19
SSR4-202ENST00000370085 TRAFD1O14545 582 aaPredicted RBP13.87□□□□□ -0.19
SSR4-202ENST00000370085 HTRA2O43464 458 aaPredicted RBP13.87□□□□□ -0.19
SSR4-202ENST00000370085 OPHN1O60890 802 aa13.87□□□□□ -0.19
SSR4-202ENST00000370085 RNGTTO60942 597 aaKnown RBP13.87□□□□□ -0.19
SSR4-202ENST00000370085 CYP2A6P11509 494 aaPredicted RBP13.87□□□□□ -0.19
SSR4-202ENST00000370085 TIMP2P16035 220 aa13.87□□□□□ -0.19
SSR4-202ENST00000370085 CD27P26842 260 aa13.87□□□□□ -0.19
SSR4-202ENST00000370085 MPLP40238 635 aa13.87□□□□□ -0.19
SSR4-202ENST00000370085 CD86P42081 329 aa13.87□□□□□ -0.19
SSR4-202ENST00000370085 WASHC5Q12768 1159 aa13.87□□□□□ -0.19
SSR4-202ENST00000370085 SGCGQ13326 291 aa13.87□□□□□ -0.19
SSR4-202ENST00000370085 TEAD4Q15561 434 aa13.87□□□□□ -0.19
SSR4-202ENST00000370085 B4GALNT4Q76KP1 1039 aa13.87□□□□□ -0.19
SSR4-202ENST00000370085 ADAT2Q7Z6V5 191 aaKnown RBP13.87□□□□□ -0.19
SSR4-202ENST00000370085 HORMAD1Q86X24 394 aa13.87□□□□□ -0.19
SSR4-202ENST00000370085 SLC41A1Q8IVJ1 513 aa13.87□□□□□ -0.19
SSR4-202ENST00000370085 DNASE2BQ8WZ79 361 aa13.87□□□□□ -0.19
SSR4-202ENST00000370085 BIRC7Q96CA5 298 aa13.87□□□□□ -0.19
SSR4-202ENST00000370085 IFT43Q96FT9 208 aa13.87□□□□□ -0.19
SSR4-202ENST00000370085 IMP4Q96G21 291 aaKnown RBP13.87□□□□□ -0.19
SSR4-202ENST00000370085 OSBPL9Q96SU4 736 aa13.87□□□□□ -0.19
SSR4-202ENST00000370085 CEP41Q9BYV8 373 aa13.87□□□□□ -0.19
SSR4-202ENST00000370085 ARRDC1-AS1Q9H2J1 176 aa13.87□□□□□ -0.19
SSR4-202ENST00000370085 VPS45Q9NRW7 570 aa13.87□□□□□ -0.19
SSR4-202ENST00000370085 RSPH14Q9UHP6 348 aa13.87□□□□□ -0.19
SSR4-202ENST00000370085 SNX12Q9UMY4 172 aa13.87□□□□□ -0.19
SSR4-202ENST00000370085 ZNF148Q9UQR1 794 aa13.87□□□□□ -0.19
SSR4-202ENST00000370085 OTOGLQ3ZCN5 2332 aa13.86□□□□□ -0.19
SSR4-202ENST00000370085 PIEZO1Q92508 2521 aa13.86□□□□□ -0.19
SSR4-202ENST00000370085 MYO15AQ9UKN7 3530 aa13.86□□□□□ -0.19
SSR4-202ENST00000370085 A0A1W2PQU0 124 aa13.86□□□□□ -0.19
SSR4-202ENST00000370085 TTC24A2A3L6 582 aaPredicted RBP13.86□□□□□ -0.19
SSR4-202ENST00000370085 GFRA3O60609 400 aa13.86□□□□□ -0.19
SSR4-202ENST00000370085 ANXA9O76027 345 aa13.86□□□□□ -0.19
SSR4-202ENST00000370085 PGLSO95336 258 aa13.86□□□□□ -0.19
SSR4-202ENST00000370085 ATP1A1P05023 1023 aaKnown RBP13.86□□□□□ -0.19
SSR4-202ENST00000370085 ITPKAP23677 461 aa13.86□□□□□ -0.19
SSR4-202ENST00000370085 PLA2G5P39877 138 aa13.86□□□□□ -0.19
SSR4-202ENST00000370085 TAS2R38P59533 333 aa13.86□□□□□ -0.19
SSR4-202ENST00000370085 FAM193AP78312 1265 aa13.86□□□□□ -0.19
SSR4-202ENST00000370085 LMNB2Q03252 620 aa13.86□□□□□ -0.19
SSR4-202ENST00000370085 CCNG2Q16589 344 aa13.86□□□□□ -0.19
SSR4-202ENST00000370085 DUOXA1Q1HG43 343 aa13.86□□□□□ -0.19
SSR4-202ENST00000370085 ARHGEF18Q6ZSZ5 1173 aa13.86□□□□□ -0.19
SSR4-202ENST00000370085 ZNF567Q8N184 647 aa13.86□□□□□ -0.19
SSR4-202ENST00000370085 CNTD1Q8N815 330 aa13.86□□□□□ -0.19
SSR4-202ENST00000370085 SLC35B2Q8TB61 432 aa13.86□□□□□ -0.19
SSR4-202ENST00000370085 ARRDC2Q8TBH0 407 aa13.86□□□□□ -0.19
SSR4-202ENST00000370085 SPATA13Q96N96 652 aa13.86□□□□□ -0.19
SSR4-202ENST00000370085 SRPK1Q96SB4 655 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms