RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 LRRC4Q9HBW1 653 aa17.03■□□□□ 0.32
DKC1-201ENST00000369550 CYP4F12Q9HCS2 524 aa17.03■□□□□ 0.32
DKC1-201ENST00000369550 RIC8BQ9NVN3 520 aa17.03■□□□□ 0.32
DKC1-201ENST00000369550 B3GNT3Q9Y2A9 372 aa17.03■□□□□ 0.32
DKC1-201ENST00000369550 TARM1B6A8C7 271 aa17.02■□□□□ 0.32
DKC1-201ENST00000369550 RPS12P25398 132 aaKnown RBP17.02■□□□□ 0.32
DKC1-201ENST00000369550 TMBIM6P55061 237 aa17.02■□□□□ 0.32
DKC1-201ENST00000369550 SOWAHAQ2M3V2 549 aa17.02■□□□□ 0.32
DKC1-201ENST00000369550 IRAK1BP1Q5VVH5 260 aa17.02■□□□□ 0.32
DKC1-201ENST00000369550 FAM160B1Q5W0V3 765 aa17.02■□□□□ 0.32
DKC1-201ENST00000369550 SLC26A9Q7LBE3 791 aa17.02■□□□□ 0.32
DKC1-201ENST00000369550 DDIASQ8IXT1 998 aa17.02■□□□□ 0.32
DKC1-201ENST00000369550 C7orf31Q8N865 590 aa17.02■□□□□ 0.32
DKC1-201ENST00000369550 PCYOX1LQ8NBM8 494 aa17.02■□□□□ 0.32
DKC1-201ENST00000369550 MAGEE2Q8TD90 523 aaPredicted RBP17.02■□□□□ 0.32
DKC1-201ENST00000369550 TUBA1CQ9BQE3 449 aa17.02■□□□□ 0.32
DKC1-201ENST00000369550 TDRD1Q9BXT4 1180 aaKnown RBP17.02■□□□□ 0.32
DKC1-201ENST00000369550 MRPL46Q9H2W6 279 aaKnown RBP17.02■□□□□ 0.32
DKC1-201ENST00000369550 TBC1D13Q9NVG8 400 aa17.02■□□□□ 0.32
DKC1-201ENST00000369550 SMPD3Q9NY59 655 aaPredicted RBP17.02■□□□□ 0.32
DKC1-201ENST00000369550 KIAA1522Q9P206 1035 aaPredicted RBP17.02■□□□□ 0.32
DKC1-201ENST00000369550 BRCA1P38398 1863 aaKnown RBP17.02■□□□□ 0.32
DKC1-201ENST00000369550 NEMP2A6NFY4 417 aa17.02■□□□□ 0.31
DKC1-201ENST00000369550 TRIM64BA6NI03 449 aa17.02■□□□□ 0.31
DKC1-201ENST00000369550 GABBR2O75899 941 aa17.02■□□□□ 0.31
DKC1-201ENST00000369550 RASAL1O95294 804 aa17.02■□□□□ 0.31
DKC1-201ENST00000369550 NMBRP28336 390 aa17.02■□□□□ 0.31
DKC1-201ENST00000369550 RPS3AP61247 264 aaKnown RBP17.02■□□□□ 0.31
DKC1-201ENST00000369550 ATP6AP1Q15904 470 aa17.02■□□□□ 0.31
DKC1-201ENST00000369550 Q3C1V9 767 aa17.02■□□□□ 0.31
DKC1-201ENST00000369550 TMTC4Q5T4D3 741 aa17.02■□□□□ 0.31
DKC1-201ENST00000369550 ZNF618Q5T7W0 954 aa17.02■□□□□ 0.31
DKC1-201ENST00000369550 TSTD2Q5T7W7 516 aa17.02■□□□□ 0.31
DKC1-201ENST00000369550 ZDHHC17Q8IUH5 632 aa17.02■□□□□ 0.31
DKC1-201ENST00000369550 CMTR2Q8IYT2 770 aaKnown RBP17.02■□□□□ 0.31
DKC1-201ENST00000369550 TXNDC5Q8NBS9 432 aaKnown RBP17.02■□□□□ 0.31
DKC1-201ENST00000369550 RNF139Q8WU17 664 aa17.02■□□□□ 0.31
DKC1-201ENST00000369550 SLC35F5Q8WV83 523 aa17.02■□□□□ 0.31
DKC1-201ENST00000369550 CENPIQ92674 756 aaPredicted RBP17.02■□□□□ 0.31
DKC1-201ENST00000369550 TEPSINQ96N21 525 aa17.02■□□□□ 0.31
DKC1-201ENST00000369550 TMPRSS4Q9NRS4 437 aa17.02■□□□□ 0.31
DKC1-201ENST00000369550 IFT80Q9P2H3 777 aaPredicted RBP17.02■□□□□ 0.31
DKC1-201ENST00000369550 GTF2IRD1Q9UHL9 959 aa17.02■□□□□ 0.31
DKC1-201ENST00000369550 MTF2Q9Y483 593 aaPredicted RBP17.02■□□□□ 0.31
DKC1-201ENST00000369550 TCAF1Q9Y4C2 921 aa17.02■□□□□ 0.31
DKC1-201ENST00000369550 ZBTB7AO95365 584 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 STMN1P16949 149 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 EEF1DP29692 281 aaKnown RBP17.01■□□□□ 0.31
DKC1-201ENST00000369550 STX1BP61266 288 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 TNK2Q07912 1038 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.01■□□□□ 0.315e-9■■□□□ 12.4
DKC1-201ENST00000369550 OR13F1Q8NGS4 319 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 HDAC10Q969S8 669 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 NRBF2Q96F24 287 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 FAR2Q96K12 515 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 TRIP11Q15643 1979 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 IGKV6D-21A0A0A0MT36 114 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 ATP6AP2A0A1C7CYW4 349 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 MAGEB16A2A368 324 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 ATP6AP2O75787 350 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 OXTRP30559 389 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 CCT8P50990 548 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 RAB10P61026 200 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 POU5F1BQ06416 359 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 GRSF1Q12849 480 aaKnown RBP eCLIP17.01■□□□□ 0.31
DKC1-201ENST00000369550 FRG1Q14331 258 aaKnown RBP17.01■□□□□ 0.31
DKC1-201ENST00000369550 PERM1Q5SV97 790 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 FRA10AC1Q70Z53 315 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 RPS27LQ71UM5 84 aaKnown RBP17.01■□□□□ 0.31
DKC1-201ENST00000369550 SLC45A3Q96JT2 553 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 GLT1D1Q96MS3 346 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 MCMBPQ9BTE3 642 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 BEGAINQ9BUH8 593 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 OSBPL2Q9H1P3 480 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 RAD21L1Q9H4I0 556 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 MEAF6Q9HAF1 191 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 CASS4Q9NQ75 786 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 NSMCE4AQ9NXX6 385 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 UBP1Q9NZI7 540 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 PSME2Q9UL46 239 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 GIT1Q9Y2X7 761 aa17.01■□□□□ 0.31
DKC1-201ENST00000369550 RBMX2Q9Y388 322 aaKnown RBP17.01■□□□□ 0.31
DKC1-201ENST00000369550 AQP12BA6NM10 295 aa17■□□□□ 0.31
DKC1-201ENST00000369550 NFKBIEO00221 500 aa17■□□□□ 0.31
DKC1-201ENST00000369550 AHSGP02765 367 aa17■□□□□ 0.31
DKC1-201ENST00000369550 UBA1P22314 1058 aaKnown RBP17■□□□□ 0.31
DKC1-201ENST00000369550 PTPN3P26045 913 aa17■□□□□ 0.31
DKC1-201ENST00000369550 YWHAQP27348 245 aa17■□□□□ 0.31
DKC1-201ENST00000369550 HLCSP50747 726 aa17■□□□□ 0.31
DKC1-201ENST00000369550 TMEM132DQ14C87 1099 aa17■□□□□ 0.31
DKC1-201ENST00000369550 BCL2A1Q16548 175 aa17■□□□□ 0.31
DKC1-201ENST00000369550 KIF19Q2TAC6 998 aa17■□□□□ 0.31
DKC1-201ENST00000369550 CYBRD1Q53TN4 286 aa17■□□□□ 0.31
DKC1-201ENST00000369550 CCNYL2Q5T2Q4 361 aa17■□□□□ 0.31
DKC1-201ENST00000369550 SLC2A7Q6PXP3 512 aa17■□□□□ 0.31
DKC1-201ENST00000369550 NT5DC4Q86YG4 428 aa17■□□□□ 0.31
DKC1-201ENST00000369550 CEP97Q8IW35 865 aa17■□□□□ 0.31
DKC1-201ENST00000369550 AQP12AQ8IXF9 295 aa17■□□□□ 0.31
DKC1-201ENST00000369550 RAB2BQ8WUD1 216 aa17■□□□□ 0.31
DKC1-201ENST00000369550 C17orf50Q8WW18 174 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms