RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 MTSS1LQ765P7 747 aa24.08■■□□□ 1.45
SNX3-203ENST00000368979 LRRC6Q86X45 466 aa24.08■■□□□ 1.45
SNX3-203ENST00000368979 MRRFQ96E11 262 aaKnown RBP24.08■■□□□ 1.45
SNX3-203ENST00000368979 LRCH3Q96II8 777 aa24.08■■□□□ 1.45
SNX3-203ENST00000368979 TREX1Q9NSU2 369 aa24.08■■□□□ 1.45
SNX3-203ENST00000368979 TBK1Q9UHD2 729 aa24.08■■□□□ 1.45
SNX3-203ENST00000368979 EVLQ9UI08 416 aaPredicted RBP24.08■■□□□ 1.45
SNX3-203ENST00000368979 SLCO3A1Q9UIG8 710 aa24.08■■□□□ 1.45
SNX3-203ENST00000368979 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP24.07■■□□□ 1.44
SNX3-203ENST00000368979 ASLP04424 464 aa24.07■■□□□ 1.44
SNX3-203ENST00000368979 PDHA1P08559 390 aa24.07■■□□□ 1.44
SNX3-203ENST00000368979 MAGOHP61326 146 aaKnown RBP24.07■■□□□ 1.44
SNX3-203ENST00000368979 MGAT5Q09328 741 aa24.07■■□□□ 1.44
SNX3-203ENST00000368979 NAB1Q13506 487 aa24.07■■□□□ 1.44
SNX3-203ENST00000368979 TMED2Q15363 201 aa24.07■■□□□ 1.44
SNX3-203ENST00000368979 SKIDA1Q1XH10 827 aa24.07■■□□□ 1.44
SNX3-203ENST00000368979 GRAMD4Q6IC98 578 aa24.07■■□□□ 1.44
SNX3-203ENST00000368979 MARK2Q7KZI7 788 aaKnown RBP24.07■■□□□ 1.44
SNX3-203ENST00000368979 SLC26A11Q86WA9 606 aa24.07■■□□□ 1.44
SNX3-203ENST00000368979 CTAGE3PQ8IX95 158 aa24.07■■□□□ 1.44
SNX3-203ENST00000368979 PPM1NQ8N819 430 aa24.07■■□□□ 1.44
SNX3-203ENST00000368979 VOPP1Q96AW1 172 aa24.07■■□□□ 1.44
SNX3-203ENST00000368979 RPP25Q9BUL9 199 aaKnown RBP24.07■■□□□ 1.44
SNX3-203ENST00000368979 DEC1Q9P2X7 70 aa24.07■■□□□ 1.44
SNX3-203ENST00000368979 ANKRD36A6QL64 1941 aa24.07■■□□□ 1.44
SNX3-203ENST00000368979 POLR3GO15318 223 aaPredicted RBP24.06■■□□□ 1.44
SNX3-203ENST00000368979 SEPT6Q14141 434 aa24.06■■□□□ 1.44
SNX3-203ENST00000368979 DLG2Q15700 870 aa24.06■■□□□ 1.44
SNX3-203ENST00000368979 PHTF2Q8N3S3 785 aa24.06■■□□□ 1.44
SNX3-203ENST00000368979 OR6K2Q8NGY2 324 aa24.06■■□□□ 1.44
SNX3-203ENST00000368979 MYLIPQ8WY64 445 aa24.06■■□□□ 1.44
SNX3-203ENST00000368979 CDKL2Q92772 493 aa24.06■■□□□ 1.44
SNX3-203ENST00000368979 MYO19Q96H55 970 aa24.06■■□□□ 1.44
SNX3-203ENST00000368979 ADGRE3Q9BY15 652 aa24.06■■□□□ 1.44
SNX3-203ENST00000368979 GTSE1Q9NYZ3 720 aa24.06■■□□□ 1.44
SNX3-203ENST00000368979 ZNF180Q9UJW8 692 aa24.06■■□□□ 1.44
SNX3-203ENST00000368979 MROH6A6NGR9 719 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 ANHXE9PGG2 379 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 H3BQ06 376 aaPredicted RBP24.05■■□□□ 1.44
SNX3-203ENST00000368979 ARNTLO00327 626 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 TRAFD1O14545 582 aaPredicted RBP24.05■■□□□ 1.44
SNX3-203ENST00000368979 PAPSS2O95340 614 aaPredicted RBP24.05■■□□□ 1.44
SNX3-203ENST00000368979 SRPRAP08240 638 aaKnown RBP24.05■■□□□ 1.44
SNX3-203ENST00000368979 INHBAP08476 426 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 GDI1P31150 447 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 OPRD1P41143 372 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 MESP2Q0VG99 397 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 HTR4Q13639 388 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 PTPRNQ16849 979 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 LPCAT1Q8NF37 534 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 CYB5D2Q8WUJ1 264 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 SORCS1Q8WY21 1168 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 TRMT61BQ9BVS5 477 aaKnown RBP24.05■■□□□ 1.44
SNX3-203ENST00000368979 PPANQ9NQ55 473 aaKnown RBP24.05■■□□□ 1.44
SNX3-203ENST00000368979 IL1RAPL1Q9NZN1 696 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 NUMBLQ9Y6R0 609 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 MUC22E2RYF6 1773 aaPredicted RBP24.05■■□□□ 1.44
SNX3-203ENST00000368979 CCDC78A2IDD5 438 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 GRXCR2A6NFK2 248 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 HTRA2O43464 458 aaPredicted RBP24.05■■□□□ 1.44
SNX3-203ENST00000368979 LDB2O43679 373 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 SOCS5O75159 536 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 ATP5BP06576 529 aaKnown RBP24.05■■□□□ 1.44
SNX3-203ENST00000368979 DLDP09622 509 aaKnown RBP24.05■■□□□ 1.44
SNX3-203ENST00000368979 ERVK-10P10266 1014 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 GJA4P35212 333 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 BCL2L1Q07817 233 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 ACCSLQ4AC99 568 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 CARD16Q5EG05 197 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 TSTD2Q5T7W7 516 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 KIAA0930Q6ICG6 404 aaPredicted RBP24.05■■□□□ 1.44
SNX3-203ENST00000368979 ESRP1Q6NXG1 681 aaKnown RBP24.05■■□□□ 1.44
SNX3-203ENST00000368979 EXOC3L1Q86VI1 746 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 RASSF3Q86WH2 238 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 PLPP6Q8IY26 295 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 FAM76AQ8TAV0 307 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 BRSK1Q8TDC3 778 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 FRS2Q8WU20 508 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 MZB1Q8WU39 189 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 RMDN1Q96DB5 314 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 TUBGCP5Q96RT8 1024 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 CIPCQ9C0C6 399 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 SLC2A6Q9UGQ3 507 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 IKBKGQ9Y6K9 419 aa24.05■■□□□ 1.44
SNX3-203ENST00000368979 ANKRD66B4E2M5 251 aa24.04■■□□□ 1.44
SNX3-203ENST00000368979 PRRT4C9JH25 899 aa24.04■■□□□ 1.44
SNX3-203ENST00000368979 UGT1A9O60656 530 aa24.04■■□□□ 1.44
SNX3-203ENST00000368979 PGLSO95336 258 aa24.04■■□□□ 1.44
SNX3-203ENST00000368979 PIGNO95427 931 aa24.04■■□□□ 1.44
SNX3-203ENST00000368979 PRKCGP05129 697 aa24.04■■□□□ 1.44
SNX3-203ENST00000368979 NR1D1P20393 614 aa24.04■■□□□ 1.44
SNX3-203ENST00000368979 KDSRQ06136 332 aa24.04■■□□□ 1.44
SNX3-203ENST00000368979 LAMB3Q13751 1172 aa24.04■■□□□ 1.44
SNX3-203ENST00000368979 EIF4HQ15056 248 aaKnown RBP24.04■■□□□ 1.44
SNX3-203ENST00000368979 QPCTQ16769 361 aa24.04■■□□□ 1.44
SNX3-203ENST00000368979 MYLK3Q32MK0 819 aa24.04■■□□□ 1.44
SNX3-203ENST00000368979 PDPK2PQ6A1A2 396 aa24.04■■□□□ 1.44
SNX3-203ENST00000368979 NLRP9Q7RTR0 991 aa24.04■■□□□ 1.44
SNX3-203ENST00000368979 KCNMB4Q86W47 210 aa24.04■■□□□ 1.44
SNX3-203ENST00000368979 CAMK1DQ8IU85 385 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms