RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 RNF125Q96EQ8 232 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 FAM111AQ96PZ2 611 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 MTMR9Q96QG7 549 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 ZFYVE21Q9BQ24 234 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 DDX50Q9BQ39 737 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 BCL7BQ9BQE9 202 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 MOV10L1Q9BXT6 1211 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 RNPEPQ9H4A4 650 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 POMKQ9H5K3 350 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 STN1Q9H668 368 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 NRIP3Q9NQ35 241 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 SERHLQ9NQF3 203 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 MARCH4Q9P2E8 410 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 DNAJB9Q9UBS3 223 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 TUBD1Q9UJT1 453 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 DLGAP4Q9Y2H0 992 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 TRAF6Q9Y4K3 522 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 ASB3Q9Y575 518 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 PCDHA5Q9Y5H7 936 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 PSAT1Q9Y617 370 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 URB1O60287 2271 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 ITPR2Q14571 2701 aa3.61□□□□□ -1.83
ECHDC1-205ENST00000368295 CACNA1EQ15878 2313 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 A0A1W2PQ27 194 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 A0A1W2PQ64 194 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 A0A1W2PQC6 194 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 A0A1W2PQD8 194 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 SCAMP1O15126 338 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 YKT6O15498 198 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 TK1P04183 234 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 PCNAP12004 261 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 GP1BBP13224 206 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 PRKACBP22694 351 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 LMAN1P49257 510 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 AARSP49588 968 aaKnown RBP eCLIP3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 CORO7P57737 925 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 YPEL5P62699 121 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 BASP1P80723 227 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 FMO1Q01740 532 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 CYP4F3Q08477 520 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 LMAN2Q12907 356 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 CHIT1Q13231 466 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 PDIA5Q14554 519 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 EFTUD2Q15029 972 aaKnown RBP eCLIP3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 ZRSR1Q15695 479 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 CNGA2Q16280 664 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 LRRC23Q53EV4 343 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 ZNF805Q5CZA5 627 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 ERMARDQ5T6L9 678 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 STPG1Q5TH74 334 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 CREB3L3Q68CJ9 461 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 PCSK4Q6UW60 755 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 C6orf89Q6UWU4 347 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 FRMD7Q6ZUT3 714 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 USP53Q70EK8 1073 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 MRPL10Q7Z7H8 261 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 ADGRA1Q86SQ6 560 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 MCEMP1Q8IX19 187 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 FAM217AQ8IXS0 508 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 FBXW8Q8N3Y1 598 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 TMEM52Q8NDY8 209 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 ABHD4Q8TB40 342 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 SETD6Q8TBK2 473 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 SMARCE1Q969G3 411 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 C1orf159Q96HA4 380 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 KIRREL1Q96J84 757 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 C7orf34Q96L11 122 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 PLEKHG4BQ96PX9 1271 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 JMJD8Q96S16 334 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 DMRTA2Q96SC8 542 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 SIN3AQ96ST3 1273 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 KCNJ15Q99712 375 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 MTMR12Q9C0I1 747 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 CCSER1Q9C0I3 900 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 S1PR5Q9H228 398 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 MUC13Q9H3R2 512 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 HAUS4Q9H6D7 363 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 OPA3Q9H6K4 179 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 GPRC5CQ9NQ84 441 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 A1CFQ9NQ94 594 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 SNX15Q9NRS6 342 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 SPATA6Q9NWH7 488 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 DDX43Q9NXZ2 648 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 EBF1Q9UH73 591 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 GPR160Q9UJ42 338 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 APPL1Q9UKG1 709 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 CHKBQ9Y259 395 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 USP9YO00507 2555 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 FLNCQ14315 2725 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 ASTN1O14525 1302 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 XKRY2A2RUG3 117 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 AQP12BA6NM10 295 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 CAPN14A8MX76 684 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 ADAM20O43506 726 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 CIDEAO60543 219 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 TSPAN1O60635 241 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 KLHL18O94889 574 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 REC8O95072 547 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 CCNDBP1O95273 360 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms