RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 MILR1Q7Z6M3 343 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 FAM126BQ8IXS8 530 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 TNS4Q8IZW8 715 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 KCTD4Q8WVF5 259 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 SNX15Q9NRS6 342 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 LNPEPQ9UIQ6 1025 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 ZNF112Q9UJU3 913 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 SPATA2Q9UM82 520 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 RPTORQ8N122 1335 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 MDM4O15151 490 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 VNN1O95497 513 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 MSH3P20585 1137 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 FASP25445 335 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 GRIA4P48058 902 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 RAB10P61026 200 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 CTBP1Q13363 440 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 ZNF572Q7Z3I7 529 aaPredicted RBP13.35□□□□□ -0.27
PTPRK-204ENST00000368210 DLG3Q92796 817 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 TMEM159Q96B96 161 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 NSMCE2Q96MF7 247 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 PANX3Q96QZ0 392 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 HGH1Q9BTY7 390 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 CCSER2Q9H7U1 834 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 PHLPP1O60346 1717 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 C15orf38-AP3S2A0A0A6YYH1 394 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 H3BNX3 289 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 AMHP03971 560 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 RALGDSQ12967 914 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 FASTKD3Q14CZ7 662 aaKnown RBP13.35□□□□□ -0.27
PTPRK-204ENST00000368210 TAB1Q15750 504 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 SAMD4BQ5PRF9 694 aaKnown RBP13.35□□□□□ -0.27
PTPRK-204ENST00000368210 ARPINQ7Z6K5 226 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 KRT73Q86Y46 540 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 PYDC1Q8WXC3 89 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 NDRG1Q92597 394 aaKnown RBP13.35□□□□□ -0.27
PTPRK-204ENST00000368210 KLHL32Q96NJ5 620 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 C12orf4Q9NQ89 552 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 STXBP5LQ9Y2K9 1186 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 SQORQ9Y6N5 450 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 BCLAF3A2AJT9 711 aaKnown RBP13.35□□□□□ -0.27
PTPRK-204ENST00000368210 PSMD12O00232 456 aaPredicted RBP13.35□□□□□ -0.27
PTPRK-204ENST00000368210 INPP4BO15327 924 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 TFEBP19484 476 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 TPSB2P20231 275 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 ATP6V1B2P21281 511 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 PTPN9P43378 593 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 GABRB2P47870 512 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 WNT3AP56704 352 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 BNIP1Q12981 228 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 MAD2L1Q13257 205 aaPredicted RBP13.35□□□□□ -0.27
PTPRK-204ENST00000368210 TPSAB1Q15661 275 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 RNASEH2BQ5TBB1 312 aaKnown RBP13.35□□□□□ -0.27
PTPRK-204ENST00000368210 ZNF516Q92618 1163 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 MECRQ9BV79 373 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 PCDH12Q9NPG4 1184 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 RBPJLQ9UBG7 517 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 ATPIF1Q9UII2 106 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 ZNF536O15090 1300 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 HDAC3O15379 428 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 TLR5O60602 858 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 RNASEH1O60930 286 aaKnown RBP13.34□□□□□ -0.27
PTPRK-204ENST00000368210 VPS4BO75351 444 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 PAGE1O75459 146 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 C22orf31O95567 290 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 CPSF4O95639 269 aaKnown RBP13.34□□□□□ -0.27
PTPRK-204ENST00000368210 CSH1P0DML2 217 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 CSH2P0DML3 217 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 FGFR1P11362 822 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 MLNP12872 115 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 SMPD1P17405 629 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 CYP2A7P20853 494 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 SERPINA4P29622 427 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 CCNFP41002 786 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 HPCAP84074 193 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 FOLH1Q04609 750 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 CCDC142Q17RM4 750 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 TEX44Q53QW1 395 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 CMC1Q7Z7K0 106 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 C11orf74Q86VG3 221 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 MCOLN3Q8TDD5 553 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 SLC12A4Q9UP95 1085 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 C2CD4BA6NLJ0 364 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 SCAMP3O14828 347 aaKnown RBP13.34□□□□□ -0.27
PTPRK-204ENST00000368210 OR56A5P0C7T3 313 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 FAM45BPQ6NSW5 357 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 PRR23BQ6ZRT6 265 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 NEK10Q6ZWH5 1172 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 FAM45AQ8TCE6 357 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 UBASH3BQ8TF42 649 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 PLEKHA8Q96JA3 519 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 FBXL18Q96ME1 805 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 OMDQ99983 421 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 MLPHQ9BV36 600 aaPredicted RBP13.34□□□□□ -0.27
PTPRK-204ENST00000368210 IMPAD1Q9NX62 359 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 GRHL1Q9NZI5 618 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 MFSD11O43934 449 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 PIGRP01833 764 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 CLCN2P51788 898 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 PKNOX1P55347 436 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 SLC25A3Q00325 362 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms