RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 LEF1Q9UJU2 399 aaPredicted RBP11.76□□□□□ -0.53
COPA-202ENST00000368069 TEX264Q9Y6I9 313 aa11.76□□□□□ -0.53
COPA-202ENST00000368069 MGAT4DA6NG13 374 aa11.76□□□□□ -0.53
COPA-202ENST00000368069 CD3EAPO15446 510 aaKnown RBP11.76□□□□□ -0.53
COPA-202ENST00000368069 URODP06132 367 aa11.76□□□□□ -0.53
COPA-202ENST00000368069 PEX2P28328 305 aa11.76□□□□□ -0.53
COPA-202ENST00000368069 PBLDP30039 288 aaPredicted RBP11.76□□□□□ -0.53
COPA-202ENST00000368069 ATP5C1P36542 298 aaKnown RBP11.76□□□□□ -0.53
COPA-202ENST00000368069 LSM12Q3MHD2 195 aaKnown RBP11.76□□□□□ -0.53
COPA-202ENST00000368069 AFTPHQ6ULP2 937 aa11.76□□□□□ -0.53
COPA-202ENST00000368069 TMEM26Q6ZUK4 368 aa11.76□□□□□ -0.53
COPA-202ENST00000368069 RELL1Q8IUW5 271 aa11.76□□□□□ -0.53
COPA-202ENST00000368069 CDYL2Q8N8U2 506 aa11.76□□□□□ -0.53
COPA-202ENST00000368069 GPR152Q8TDT2 470 aa11.76□□□□□ -0.53
COPA-202ENST00000368069 CCDC28BQ9BUN5 200 aa11.76□□□□□ -0.53
COPA-202ENST00000368069 TMPRSS4Q9NRS4 437 aa11.76□□□□□ -0.53
COPA-202ENST00000368069 A8MX80 341 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 RGS14O43566 566 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 MT-CYBP00156 380 aaPredicted RBP11.75□□□□□ -0.53
COPA-202ENST00000368069 MSH3P20585 1137 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 TMED10P49755 219 aaKnown RBP11.75□□□□□ -0.53
COPA-202ENST00000368069 EPHB3P54753 998 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 BOP1Q14137 746 aaKnown RBP11.75□□□□□ -0.53
COPA-202ENST00000368069 CCDC85BQ15834 202 aaPredicted RBP11.75□□□□□ -0.53
COPA-202ENST00000368069 INTS6LQ5JSJ4 861 aaKnown RBP11.75□□□□□ -0.53
COPA-202ENST00000368069 ARMC12Q5T9G4 340 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 HECTD2Q5U5R9 776 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 CDCA2Q69YH5 1023 aaPredicted RBP11.75□□□□□ -0.53
COPA-202ENST00000368069 OTUB1Q96FW1 271 aaPredicted RBP11.75□□□□□ -0.53
COPA-202ENST00000368069 EBF2Q9HAK2 575 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 IGSF9Q9P2J2 1179 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 KLQ9UEF7 1012 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 SLC25A13Q9UJS0 675 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 CHD4Q14839 1912 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 MYH1P12882 1939 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 DHRS12A0PJE2 317 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 SCAMP3O14828 347 aaKnown RBP11.75□□□□□ -0.53
COPA-202ENST00000368069 NRP2O60462 931 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 IPO13O94829 963 aaKnown RBP11.75□□□□□ -0.53
COPA-202ENST00000368069 SMPD1P17405 629 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 PSMB9P28065 219 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 FSTL1Q12841 308 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 TAC4Q86UU9 113 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 STK40Q8N2I9 435 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 PCED1BQ96HM7 432 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 GMLQ99445 158 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 EMILIN2Q9BXX0 1053 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 TEKT2Q9UIF3 430 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 TNPO3Q9Y5L0 923 aaKnown RBP11.75□□□□□ -0.53
COPA-202ENST00000368069 AKAP11Q9UKA4 1901 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 A0A1W2PQH9 124 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 KCNU1A8MYU2 1149 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 PCNAP12004 261 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 SLC5A9Q2M3M2 681 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 ZIK1Q3SY52 487 aaPredicted RBP11.75□□□□□ -0.53
COPA-202ENST00000368069 NOL9Q5SY16 702 aaKnown RBP11.75□□□□□ -0.53
COPA-202ENST00000368069 NCBP2-AS2Q69YL0 99 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 SLC44A2Q8IWA5 706 aaPredicted RBP11.75□□□□□ -0.53
COPA-202ENST00000368069 KIAA2013Q8IYS2 634 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 TCF12Q99081 682 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 TRMOQ9BU70 441 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 OSBPL11Q9BXB4 747 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 SLC7A8Q9UHI5 535 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 SLC27A5Q9Y2P5 690 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 C1orf232A0A0U1RR37 186 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 YJEFN3A6XGL0 299 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 PTGES3LE9PB15 166 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 F8W810 466 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 PPEF2O14830 753 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 ITM2AO43736 263 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 TBX10O75333 385 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 MLYCDO95822 493 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 VCLP18206 1134 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 DAOAP59103 153 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 RUNX1T1Q06455 604 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 GRIK3Q13003 919 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 DCTN2Q13561 401 aaKnown RBP11.75□□□□□ -0.53
COPA-202ENST00000368069 ZNF460Q14592 562 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 ZNF284Q2VY69 593 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 TRIM60Q495X7 471 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 ESRP1Q6NXG1 681 aaKnown RBP11.75□□□□□ -0.53
COPA-202ENST00000368069 DLK2Q6UY11 383 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 IGDCC3Q8IVU1 814 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 PGAM4Q8N0Y7 254 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 ADCY4Q8NFM4 1077 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 OR4L1Q8NH43 312 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 PEBP4Q96S96 227 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 STRA6Q9BX79 667 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 FAM126AQ9BYI3 521 aaPredicted RBP11.75□□□□□ -0.53
COPA-202ENST00000368069 TXLNGYQ9BZA5 131 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 AGO3Q9H9G7 860 aaKnown RBP11.75□□□□□ -0.53
COPA-202ENST00000368069 SIX4Q9UIU6 781 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 INVSQ9Y283 1065 aa11.75□□□□□ -0.53
COPA-202ENST00000368069 A0A0G2JLL6 359 aaPredicted RBP11.74□□□□□ -0.53
COPA-202ENST00000368069 MYBPHLA2RUH7 354 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 FAM159BA6NKW6 160 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 LGR5O75473 907 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 FGF1P05230 155 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 HLA-DPA1P20036 260 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 CLCNKBP51801 687 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms