RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 KLQ9UEF7 1012 aa14.82□□□□□ -0.04
VAMP4-202ENST00000367740 FCF1Q9Y324 198 aaKnown RBP14.82□□□□□ -0.04
VAMP4-202ENST00000367740 COQ4Q9Y3A0 265 aa14.82□□□□□ -0.04
VAMP4-202ENST00000367740 TMEM110-MUSTN1A8MSY1 372 aa14.81□□□□□ -0.04
VAMP4-202ENST00000367740 CUTAO60888 179 aa14.81□□□□□ -0.04
VAMP4-202ENST00000367740 ZMPSTE24O75844 475 aa14.81□□□□□ -0.04
VAMP4-202ENST00000367740 ADCY5O95622 1261 aa14.81□□□□□ -0.04
VAMP4-202ENST00000367740 LDLRP01130 860 aa14.81□□□□□ -0.04
VAMP4-202ENST00000367740 TCN2P20062 427 aa14.81□□□□□ -0.04
VAMP4-202ENST00000367740 GPD2P43304 727 aa14.81□□□□□ -0.04
VAMP4-202ENST00000367740 LIMK2P53671 638 aa14.81□□□□□ -0.04
VAMP4-202ENST00000367740 MC1RQ01726 317 aa14.81□□□□□ -0.04
VAMP4-202ENST00000367740 TAF5Q15542 800 aa14.81□□□□□ -0.04
VAMP4-202ENST00000367740 EIF2S3LQ2VIR3 472 aaKnown RBP14.81□□□□□ -0.04
VAMP4-202ENST00000367740 ZNF805Q5CZA5 627 aa14.81□□□□□ -0.04
VAMP4-202ENST00000367740 ANKS6Q68DC2 871 aa14.81□□□□□ -0.04
VAMP4-202ENST00000367740 SPECC1LQ69YQ0 1117 aa14.81□□□□□ -0.04
VAMP4-202ENST00000367740 TIPARPQ7Z3E1 657 aaKnown RBP14.81□□□□□ -0.04
VAMP4-202ENST00000367740 ZNF438Q7Z4V0 828 aa14.81□□□□□ -0.04
VAMP4-202ENST00000367740 TAF8Q7Z7C8 310 aa14.81□□□□□ -0.04
VAMP4-202ENST00000367740 SETD3Q86TU7 594 aaPredicted RBP14.81□□□□□ -0.04
VAMP4-202ENST00000367740 AGBL5Q8NDL9 886 aa14.81□□□□□ -0.04
VAMP4-202ENST00000367740 OR7D4Q8NG98 312 aa14.81□□□□□ -0.04
VAMP4-202ENST00000367740 OR6K2Q8NGY2 324 aa14.81□□□□□ -0.04
VAMP4-202ENST00000367740 ARHGEF26Q96DR7 871 aa14.81□□□□□ -0.04
VAMP4-202ENST00000367740 EFHD1Q9BUP0 239 aa14.81□□□□□ -0.04
VAMP4-202ENST00000367740 TM6SF2Q9BZW4 377 aa14.81□□□□□ -0.04
VAMP4-202ENST00000367740 OCIAD1Q9NX40 245 aa14.81□□□□□ -0.04
VAMP4-202ENST00000367740 MAP4K5Q9Y4K4 846 aa14.81□□□□□ -0.04
VAMP4-202ENST00000367740 ACTL7AQ9Y615 435 aa14.81□□□□□ -0.04
VAMP4-202ENST00000367740 E5RJQ4 531 aa14.8□□□□□ -0.04
VAMP4-202ENST00000367740 STX10O60499 249 aa14.8□□□□□ -0.04
VAMP4-202ENST00000367740 PAGE1O75459 146 aa14.8□□□□□ -0.04
VAMP4-202ENST00000367740 SYT1P21579 422 aa14.8□□□□□ -0.04
VAMP4-202ENST00000367740 TBXAS1P24557 533 aaPredicted RBP14.8□□□□□ -0.04
VAMP4-202ENST00000367740 MAP4P27816 1152 aaKnown RBP14.8□□□□□ -0.04
VAMP4-202ENST00000367740 HTR1BP28222 390 aa14.8□□□□□ -0.04
VAMP4-202ENST00000367740 MAZP56270 477 aaKnown RBP14.8□□□□□ -0.04
VAMP4-202ENST00000367740 ARF5P84085 180 aa14.8□□□□□ -0.04
VAMP4-202ENST00000367740 LRMPQ12912 555 aa14.8□□□□□ -0.04
VAMP4-202ENST00000367740 MRPL49Q13405 166 aaKnown RBP14.8□□□□□ -0.04
VAMP4-202ENST00000367740 ADAM9Q13443 819 aa14.8□□□□□ -0.04
VAMP4-202ENST00000367740 TRA2AQ13595 282 aaKnown RBP eCLIP14.8□□□□□ -0.04
VAMP4-202ENST00000367740 NR1D2Q14995 579 aa14.8□□□□□ -0.04
VAMP4-202ENST00000367740 CLPPQ16740 277 aaPredicted RBP14.8□□□□□ -0.04
VAMP4-202ENST00000367740 DCAF12Q5T6F0 453 aa14.8□□□□□ -0.04
VAMP4-202ENST00000367740 ZNF683Q8IZ20 524 aa14.8□□□□□ -0.04
VAMP4-202ENST00000367740 BMPERQ8N8U9 685 aa14.8□□□□□ -0.04
VAMP4-202ENST00000367740 ERRFI1Q9UJM3 462 aaPredicted RBP14.8□□□□□ -0.04
VAMP4-202ENST00000367740 OR1A2Q9Y585 309 aa14.8□□□□□ -0.04
VAMP4-202ENST00000367740 MRPS18BQ9Y676 258 aaKnown RBP14.8□□□□□ -0.04
VAMP4-202ENST00000367740 DGKBQ9Y6T7 804 aa14.8□□□□□ -0.04
VAMP4-202ENST00000367740 B4E171 279 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 TNFP01375 233 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 UGT2B4P06133 528 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 THRAP10827 490 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 ITIH2P19823 946 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 RPL13P26373 211 aaKnown RBP14.79□□□□□ -0.04
VAMP4-202ENST00000367740 CD1CP29017 333 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 ALDH4A1P30038 563 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 CSF2RBP32927 897 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 CSTF2P33240 577 aaKnown RBP eCLIP14.79□□□□□ -0.04
VAMP4-202ENST00000367740 TSPAN7P41732 249 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 ACADSBP45954 432 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 COPB1P53618 953 aaKnown RBP14.79□□□□□ -0.04
VAMP4-202ENST00000367740 RAB15P59190 212 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 CDK17Q00537 523 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 ABHD18Q0P651 414 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 LRRC14Q15048 493 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 WSCD2Q2TBF2 565 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 ZCWPW2Q504Y3 356 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 RETSATQ6NUM9 610 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 FOXR2Q6PJQ5 311 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 TFAP2DQ7Z6R9 452 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 FAM129CQ86XR2 697 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 CXorf40AQ8TE69 158 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 OR1E3Q8WZA6 343 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 RTP4Q96DX8 246 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 WDR92Q96MX6 357 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 WRAP53Q9BUR4 548 aaKnown RBP14.79□□□□□ -0.04
VAMP4-202ENST00000367740 APOOQ9BUR5 198 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 SLC4A5Q9BY07 1137 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 INTS2Q9H0H0 1204 aaKnown RBP14.79□□□□□ -0.04
VAMP4-202ENST00000367740 SIK2Q9H0K1 926 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 DPEP2Q9H4A9 486 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 THAP9Q9H5L6 903 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 DKK3Q9UBP4 350 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 COQ6Q9Y2Z9 468 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 PCDHB4Q9Y5E5 795 aa14.79□□□□□ -0.04
VAMP4-202ENST00000367740 TCP11X1B4DZS4 312 aa14.78□□□□□ -0.04
VAMP4-202ENST00000367740 RFPL1O75677 317 aa14.78□□□□□ -0.04
VAMP4-202ENST00000367740 SORBS2O94875 1100 aaKnown RBP14.78□□□□□ -0.04
VAMP4-202ENST00000367740 CD160O95971 181 aa14.78□□□□□ -0.04
VAMP4-202ENST00000367740 PRF1P14222 555 aa14.78□□□□□ -0.04
VAMP4-202ENST00000367740 INPP5AQ14642 412 aa14.78□□□□□ -0.04
VAMP4-202ENST00000367740 C17orf82Q86X59 251 aaPredicted RBP14.78□□□□□ -0.04
VAMP4-202ENST00000367740 IRF2BP1Q8IU81 584 aa14.78□□□□□ -0.04
VAMP4-202ENST00000367740 NRSN1Q8IZ57 195 aa14.78□□□□□ -0.04
VAMP4-202ENST00000367740 DEFB106AQ8N104 65 aa14.78□□□□□ -0.04
VAMP4-202ENST00000367740 OR4D9Q8NGE8 314 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms