RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 PACSIN1Q9BY11 444 aa7.74□□□□□ -1.17
H3F3A-201ENST00000366813 GPR88Q9GZN0 384 aa7.74□□□□□ -1.17
H3F3A-201ENST00000366813 EBF3Q9H4W6 596 aa7.74□□□□□ -1.17
H3F3A-201ENST00000366813 GSTO2Q9H4Y5 243 aa7.74□□□□□ -1.17
H3F3A-201ENST00000366813 AKIP1Q9NQ31 210 aa7.74□□□□□ -1.17
H3F3A-201ENST00000366813 HPS4Q9NQG7 708 aa7.74□□□□□ -1.17
H3F3A-201ENST00000366813 SEC63Q9UGP8 760 aaKnown RBP7.74□□□□□ -1.17
H3F3A-201ENST00000366813 CABIN1Q9Y6J0 2220 aa7.74□□□□□ -1.17
H3F3A-201ENST00000366813 TTC41PQ6P2S7 1318 aa7.73□□□□□ -1.17
H3F3A-201ENST00000366813 TNRC6BQ9UPQ9 1833 aaKnown RBP7.73□□□□□ -1.17
H3F3A-201ENST00000366813 UTP20O75691 2785 aaKnown RBP7.73□□□□□ -1.17
H3F3A-201ENST00000366813 DRGXA6NNA5 263 aa7.73□□□□□ -1.17
H3F3A-201ENST00000366813 HAUS5O94927 633 aa7.73□□□□□ -1.17
H3F3A-201ENST00000366813 NDUFA10O95299 355 aa7.73□□□□□ -1.17
H3F3A-201ENST00000366813 PRAMEF12O95522 483 aa7.73□□□□□ -1.17
H3F3A-201ENST00000366813 ADRA1BP35368 520 aa7.73□□□□□ -1.17
H3F3A-201ENST00000366813 HOXD12P35452 270 aa7.73□□□□□ -1.17
H3F3A-201ENST00000366813 DPP6P42658 865 aa7.73□□□□□ -1.17
H3F3A-201ENST00000366813 NT5C2P49902 561 aa7.73□□□□□ -1.17
H3F3A-201ENST00000366813 CLDN6P56747 220 aa7.73□□□□□ -1.17
H3F3A-201ENST00000366813 ELAVL2Q12926 359 aaKnown RBP7.73□□□□□ -1.17
H3F3A-201ENST00000366813 RUNX3Q13761 415 aa7.73□□□□□ -1.17
H3F3A-201ENST00000366813 SMAD1Q15797 465 aaKnown RBP7.73□□□□□ -1.17
H3F3A-201ENST00000366813 FBXO43Q4G163 708 aa7.73□□□□□ -1.17
H3F3A-201ENST00000366813 SMAP1Q8IYB5 467 aaPredicted RBP7.73□□□□□ -1.17
H3F3A-201ENST00000366813 CCDC33Q8N5R6 958 aa7.73□□□□□ -1.17
H3F3A-201ENST00000366813 MED8Q96G25 268 aa7.73□□□□□ -1.17
H3F3A-201ENST00000366813 P2RY13Q9BPV8 354 aa7.73□□□□□ -1.17
H3F3A-201ENST00000366813 KRT23Q9C075 422 aa7.73□□□□□ -1.17
H3F3A-201ENST00000366813 CXCL16Q9H2A7 254 aa7.73□□□□□ -1.17
H3F3A-201ENST00000366813 BHMT2Q9H2M3 363 aa7.73□□□□□ -1.17
H3F3A-201ENST00000366813 TOR3AQ9H497 397 aa7.73□□□□□ -1.17
H3F3A-201ENST00000366813 ZMAT3Q9HA38 289 aaKnown RBP7.73□□□□□ -1.17
H3F3A-201ENST00000366813 CPNE5Q9HCH3 593 aa7.73□□□□□ -1.17
H3F3A-201ENST00000366813 JKAMPQ9P055 326 aa7.73□□□□□ -1.17
H3F3A-201ENST00000366813 POLQO75417 2590 aa7.72□□□□□ -1.17
H3F3A-201ENST00000366813 HELZP42694 1942 aaKnown RBP7.72□□□□□ -1.17
H3F3A-201ENST00000366813 IGLV3-22A0A075B6J6 115 aa7.72□□□□□ -1.17
H3F3A-201ENST00000366813 PRSS29PA6NIE9 313 aa7.72□□□□□ -1.17
H3F3A-201ENST00000366813 E9PAM4 449 aa7.72□□□□□ -1.17
H3F3A-201ENST00000366813 LEFTY2O00292 366 aa7.72□□□□□ -1.17
H3F3A-201ENST00000366813 TSPAN1O60635 241 aa7.72□□□□□ -1.17
H3F3A-201ENST00000366813 NCR1O76036 304 aa7.72□□□□□ -1.17
H3F3A-201ENST00000366813 ARSAP15289 507 aa7.72□□□□□ -1.17
H3F3A-201ENST00000366813 SLC6A2P23975 617 aa7.72□□□□□ -1.17
H3F3A-201ENST00000366813 RNASE9P60153 205 aaKnown RBP7.72□□□□□ -1.17
H3F3A-201ENST00000366813 NHLH2Q02577 135 aa7.72□□□□□ -1.17
H3F3A-201ENST00000366813 MYO1EQ12965 1108 aa7.72□□□□□ -1.17
H3F3A-201ENST00000366813 PREPLQ4J6C6 727 aaPredicted RBP7.72□□□□□ -1.17
H3F3A-201ENST00000366813 RNF220Q5VTB9 566 aa7.72□□□□□ -1.17
H3F3A-201ENST00000366813 SLC8B1Q6J4K2 584 aa7.72□□□□□ -1.17
H3F3A-201ENST00000366813 PPP4R4Q6NUP7 873 aa7.72□□□□□ -1.17
H3F3A-201ENST00000366813 DARS2Q6PI48 645 aaKnown RBP7.72□□□□□ -1.17
H3F3A-201ENST00000366813 DHRS13Q6UX07 377 aa7.72□□□□□ -1.17
H3F3A-201ENST00000366813 NIPA1Q7RTP0 329 aa7.72□□□□□ -1.17
H3F3A-201ENST00000366813 CDR2LQ86X02 465 aaPredicted RBP7.72□□□□□ -1.17
H3F3A-201ENST00000366813 LEMD2Q8NC56 503 aa7.72□□□□□ -1.17
H3F3A-201ENST00000366813 BRIX1Q8TDN6 353 aaKnown RBP7.72□□□□□ -1.17
H3F3A-201ENST00000366813 NXPE2Q96DL1 559 aa7.72□□□□□ -1.17
H3F3A-201ENST00000366813 PI4K2AQ9BTU6 479 aa7.72□□□□□ -1.17
H3F3A-201ENST00000366813 SPZ1Q9BXG8 430 aa7.72□□□□□ -1.17
H3F3A-201ENST00000366813 SERHL2Q9H4I8 314 aa7.72□□□□□ -1.17
H3F3A-201ENST00000366813 IL21RQ9HBE5 538 aa7.72□□□□□ -1.17
H3F3A-201ENST00000366813 SARS2Q9NP81 518 aaKnown RBP7.72□□□□□ -1.17
H3F3A-201ENST00000366813 TBC1D22BQ9NU19 505 aa7.72□□□□□ -1.17
H3F3A-201ENST00000366813 ZDHHC8Q9ULC8 765 aa7.72□□□□□ -1.17
H3F3A-201ENST00000366813 HEMK1Q9Y5R4 338 aaPredicted RBP7.72□□□□□ -1.17
H3F3A-201ENST00000366813 BOD1L1Q8NFC6 3051 aa7.71□□□□□ -1.18
H3F3A-201ENST00000366813 GAGE12BA1L429 117 aa7.71□□□□□ -1.18
H3F3A-201ENST00000366813 GRID2IPA4D2P6 1211 aa7.71□□□□□ -1.18
H3F3A-201ENST00000366813 GAGE12HA6NDE8 117 aa7.71□□□□□ -1.18
H3F3A-201ENST00000366813 DIRC3C9JPN6 131 aa7.71□□□□□ -1.18
H3F3A-201ENST00000366813 IFIT3O14879 490 aaKnown RBP7.71□□□□□ -1.18
H3F3A-201ENST00000366813 PHGDHO43175 533 aaKnown RBP7.71□□□□□ -1.18
H3F3A-201ENST00000366813 ERLIN2O94905 339 aa7.71□□□□□ -1.18
H3F3A-201ENST00000366813 STBD1O95210 358 aa7.71□□□□□ -1.18
H3F3A-201ENST00000366813 PLEKHA8P1O95397 391 aa7.71□□□□□ -1.18
H3F3A-201ENST00000366813 MATN4O95460 622 aa7.71□□□□□ -1.18
H3F3A-201ENST00000366813 AHSGP02765 367 aa7.71□□□□□ -1.18
H3F3A-201ENST00000366813 ZFP36P26651 326 aaKnown RBP7.71□□□□□ -1.18
H3F3A-201ENST00000366813 MCM2P49736 904 aa7.71□□□□□ -1.18
H3F3A-201ENST00000366813 CHN2P52757 468 aa7.71□□□□□ -1.18
H3F3A-201ENST00000366813 ZNF33AQ06730 810 aa7.71□□□□□ -1.18
H3F3A-201ENST00000366813 SEMA5AQ13591 1074 aa7.71□□□□□ -1.18
H3F3A-201ENST00000366813 COBLL1Q53SF7 1204 aa7.71□□□□□ -1.18
H3F3A-201ENST00000366813 KHDC1LQ5JSQ8 128 aa7.71□□□□□ -1.18
H3F3A-201ENST00000366813 SPDYCQ5MJ68 293 aa7.71□□□□□ -1.18
H3F3A-201ENST00000366813 METRNLQ641Q3 311 aa7.71□□□□□ -1.18
H3F3A-201ENST00000366813 CD300LGQ6UXG3 332 aa7.71□□□□□ -1.18
H3F3A-201ENST00000366813 MED25Q71SY5 747 aa7.71□□□□□ -1.18
H3F3A-201ENST00000366813 SRBD1Q8N5C6 995 aaKnown RBP7.71□□□□□ -1.18
H3F3A-201ENST00000366813 FITM2Q8N6M3 262 aa7.71□□□□□ -1.18
H3F3A-201ENST00000366813 PRPF31Q8WWY3 499 aaKnown RBP7.71□□□□□ -1.18
H3F3A-201ENST00000366813 NAF1Q96HR8 494 aaKnown RBP7.71□□□□□ -1.18
H3F3A-201ENST00000366813 C22orf23Q9BZE7 217 aa7.71□□□□□ -1.18
H3F3A-201ENST00000366813 TRIM6Q9C030 488 aaPredicted RBP7.71□□□□□ -1.18
H3F3A-201ENST00000366813 ITPR2Q14571 2701 aa7.7□□□□□ -1.18
H3F3A-201ENST00000366813 CDHR4A6H8M9 788 aa7.7□□□□□ -1.18
H3F3A-201ENST00000366813 TMEM200CA6NKL6 621 aa7.7□□□□□ -1.18
H3F3A-201ENST00000366813 ZAR1LA6NP61 321 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms