RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 ANKS1BQ7Z6G8 1248 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 NELL1Q92832 810 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 DGCR14Q96DF8 476 aaKnown RBP12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 GAD1Q99259 594 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 CDH19Q9H159 772 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 COQ4Q9Y3A0 265 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 PCDHB1Q9Y5F3 818 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 ATRNL1Q5VV63 1379 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 AZIN1O14977 448 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 ZBTB22O15209 634 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 DUSP28Q4G0W2 176 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 DEPDC7Q96QD5 511 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 MLPHQ9BV36 600 aaPredicted RBP12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 DMTF1Q9Y222 760 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 KCNJ2P63252 427 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 C15orf59Q2T9L4 293 aaPredicted RBP12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 FGD2Q7Z6J4 655 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 PGBD3Q8N328 593 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 ENKURQ8TC29 256 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 BTN2A2Q8WVV5 523 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 WARSP23381 471 aaKnown RBP12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 ANXA8L1Q5VT79 327 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 SEZ6LQ9BYH1 1024 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 POLR2EP19388 210 aaKnown RBP12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 TCEA2Q15560 299 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 ZNF467Q7Z7K2 595 aaPredicted RBP12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 AP2A1O95782 977 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 GRIA3P42263 894 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 ASMTP46597 345 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 TEX44Q53QW1 395 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 SELENOMQ8WWX9 145 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 ROPN1LQ96C74 230 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 PCDH18Q9HCL0 1135 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 ZNF232Q9UNY5 417 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 UBXN8O00124 270 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 SMIM10L2AP0DMW4 78 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 SMIM10L2BP0DMW5 78 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 TFEBP19484 476 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 NME5P56597 212 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 PQLC1Q8N2U9 271 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 KREMEN1Q96MU8 473 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 TRAV19A0A0A6YYK7 116 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 EFCAB10A6NFE3 127 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 YBEYP58557 167 aaPredicted RBP12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 SPATS1Q496A3 300 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 CLVS1Q8IUQ0 354 aaPredicted RBP12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 GBA3Q9H227 469 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 RHBDL2Q9NX52 303 aa12.11□□□□□ -0.47
CDC42BPA-203ENST00000366766 TMEM150BA6NC51 233 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 ERICH5Q6P6B1 374 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 SLITRK2Q9H156 845 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 MYH14Q7Z406 1995 aaKnown RBP12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 MYBL2P10244 700 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 LSM12Q3MHD2 195 aaKnown RBP12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 C11orf88Q6PI97 169 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 ITCHQ96J02 903 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 RHOBTB2Q9BYZ6 727 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 SLC9A8Q9Y2E8 581 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 FAM25AB3EWG3 89 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 FAM25CB3EWG5 89 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 FAM25GB3EWG6 89 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 GOT1P17174 413 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 SGCGQ13326 291 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 SLC39A12Q504Y0 691 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 SYT12Q8IV01 421 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 KIAA0319LQ8IZA0 1049 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 SPG21Q9NZD8 308 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 SAMD4AQ9UPU9 718 aaKnown RBP12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 CPSF4O95639 269 aaKnown RBP12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 NOS3P29474 1203 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 NINQ8N4C6 2090 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 SYNDIG1LA6NDD5 238 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 FAM43BQ6ZT52 329 aaPredicted RBP12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 PDPRQ8NCN5 879 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 SLC4A9Q96Q91 983 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 SLC38A2Q96QD8 506 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 TRPC4Q9UBN4 977 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 PLK4O00444 970 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 IPO13O94829 963 aaKnown RBP12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 TPH1P17752 444 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 ERCC2P18074 760 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 RPS7P62081 194 aaKnown RBP12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 SPIRE1Q08AE8 756 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 OR8H2Q8N162 312 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 SPOCK2Q92563 424 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 PLGRKTQ9HBL7 147 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 ALOX5P09917 674 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 BOP1Q14137 746 aaKnown RBP12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 TTC7BQ86TV6 843 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 PGAM4Q8N0Y7 254 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 CERS5Q8N5B7 392 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 DNAJB8Q8NHS0 232 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 BBS4Q96RK4 519 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 CLN6Q9NWW5 311 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 DDX3YO15523 660 aaKnown RBP12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 CLDN11O75508 207 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 SLC22A3O75751 556 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 COX7A2P14406 83 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 POU1F1P28069 291 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 ZCCHC23Q6ZST2 131 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms