RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 RGS14O43566 566 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 SPARCP09486 303 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 CBSLP0DN79 551 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 ITGAXP20702 1163 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 MAN1A1P33908 653 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 CBSP35520 551 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 GEMIN4P57678 1058 aaKnown RBP4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 GPS2Q13227 327 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 GSTA3Q16772 222 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 FNBP1LQ5T0N5 605 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 CCDC30Q5VVM6 783 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 HIST2H2BCQ6DN03 193 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 HIST2H2BDQ6DRA6 164 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 AWAT2Q6E213 333 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 FBXO46Q6PJ61 603 aaPredicted RBP4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 DSTYKQ6XUX3 929 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 PALB2Q86YC2 1186 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 PELI3Q8N2H9 469 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 MIGA1Q8NAN2 632 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 TMEM163Q8TC26 289 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 OIT3Q8WWZ8 545 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 SNAPC3Q92966 411 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 MXRA8Q9BRK3 442 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 TKTL2Q9H0I9 626 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 RANBP17Q9H2T7 1088 aaKnown RBP4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 ZHX3Q9H4I2 956 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 BRF2Q9HAW0 419 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 INTS6Q9UL03 887 aaKnown RBP4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 MKLN1Q9UL63 735 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 CARD8Q9Y2G2 431 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 FAM96BQ9Y3D0 163 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 PTGDR2Q9Y5Y4 395 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 SCINQ9Y6U3 715 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 PIAS3Q9Y6X2 628 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 KDM4EB2RXH2 506 aaPredicted RBP4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 SEC14L5O43304 696 aa4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 USO1O60763 962 aaKnown RBP4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 TMEM63AO94886 807 aa4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 MT-CYBP00156 380 aaPredicted RBP4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 TFP02787 698 aa4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 IGKV2-30P06310 120 aa4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 PCNAP12004 261 aa4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 ETFAP13804 333 aa4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 CAPN3P20807 821 aa4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 HOXA11P31270 313 aaPredicted RBP4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 SHMT1P34896 483 aa4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 RFX2P48378 723 aa4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 RXRGP48443 463 aa4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 ENTPD1P49961 510 aa4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 EIF3BP55884 814 aaKnown RBP4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 HDAC4P56524 1084 aa4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 TMEM115Q12893 351 aaPredicted RBP4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 HIST2H2ACQ16777 129 aaPredicted RBP4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 COL28A1Q2UY09 1125 aa4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 SGO1Q5FBB7 561 aa4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 CDC73Q6P1J9 531 aa4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 TMTC3Q6ZXV5 915 aa4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 TRILQ7L0X0 811 aa4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 ZCCHC9Q8N567 271 aaKnown RBP4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 ANKRD52Q8NB46 1076 aa4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 NEXN-AS1Q8NBZ9 246 aa4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 ARRDC2Q8TBH0 407 aa4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 H2AFJQ9BTM1 129 aa4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 RBM38Q9H0Z9 239 aaKnown RBP4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 CATSPERBQ9H7T0 1116 aa4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 CLK4Q9HAZ1 481 aaKnown RBP4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 DDX4Q9NQI0 724 aaKnown RBP4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 SMYD2Q9NRG4 433 aa4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 SRPRBQ9Y5M8 271 aaKnown RBP4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 PSAT1Q9Y617 370 aa4.44□□□□□ -1.7
RNU6-560P-201ENST00000364007 A0A087X0M5 115 aa4.43□□□□□ -1.7
RNU6-560P-201ENST00000364007 A0A1B0GX30 115 aa4.43□□□□□ -1.7
RNU6-560P-201ENST00000364007 J3KR12 359 aa4.43□□□□□ -1.7
RNU6-560P-201ENST00000364007 TAF4O00268 1085 aa4.43□□□□□ -1.7
RNU6-560P-201ENST00000364007 BCAT2O15382 392 aaPredicted RBP4.43□□□□□ -1.7
RNU6-560P-201ENST00000364007 SPRY3O43610 288 aa4.43□□□□□ -1.7
RNU6-560P-201ENST00000364007 ITM2AO43736 263 aa4.43□□□□□ -1.7
RNU6-560P-201ENST00000364007 CLEC3BP05452 202 aa4.43□□□□□ -1.7
RNU6-560P-201ENST00000364007 NAGAP17050 411 aa4.43□□□□□ -1.7
RNU6-560P-201ENST00000364007 MAPK4P31152 587 aa4.43□□□□□ -1.7
RNU6-560P-201ENST00000364007 ARRB2P32121 409 aa4.43□□□□□ -1.7
RNU6-560P-201ENST00000364007 PIGAP37287 484 aa4.43□□□□□ -1.7
RNU6-560P-201ENST00000364007 PBX3P40426 434 aa4.43□□□□□ -1.7
RNU6-560P-201ENST00000364007 LINC00205P59089 165 aa4.43□□□□□ -1.7
RNU6-560P-201ENST00000364007 RPS3AP61247 264 aaKnown RBP4.43□□□□□ -1.7
RNU6-560P-201ENST00000364007 ABATP80404 500 aa4.43□□□□□ -1.7
RNU6-560P-201ENST00000364007 ITGADQ13349 1161 aa4.43□□□□□ -1.7
RNU6-560P-201ENST00000364007 CTTNQ14247 550 aaKnown RBP4.43□□□□□ -1.7
RNU6-560P-201ENST00000364007 ALG11Q2TAA5 492 aa4.43□□□□□ -1.7
RNU6-560P-201ENST00000364007 FSCBQ5H9T9 825 aa4.43□□□□□ -1.7
RNU6-560P-201ENST00000364007 OTUD1Q5VV17 481 aaPredicted RBP4.43□□□□□ -1.7
RNU6-560P-201ENST00000364007 ZNF549Q6P9A3 640 aa4.43□□□□□ -1.7
RNU6-560P-201ENST00000364007 ETNPPLQ8TBG4 499 aa4.43□□□□□ -1.7
RNU6-560P-201ENST00000364007 ERGIC1Q969X5 290 aa4.43□□□□□ -1.7
RNU6-560P-201ENST00000364007 ZBTB9Q96C00 473 aa4.43□□□□□ -1.7
RNU6-560P-201ENST00000364007 EBF3Q9H4W6 596 aa4.43□□□□□ -1.7
RNU6-560P-201ENST00000364007 SCPEP1Q9HB40 452 aa4.43□□□□□ -1.7
RNU6-560P-201ENST00000364007 MAGEE1Q9HCI5 957 aa4.43□□□□□ -1.7
RNU6-560P-201ENST00000364007 CYSLTR2Q9NS75 346 aa4.43□□□□□ -1.7
RNU6-560P-201ENST00000364007 TMEM51Q9NW97 253 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms