RNA–Protein interactions for RNA: ENST00000363904.1

RNU6-478P-201, Transcript of RNA, U6 small nuclear 478, pseudogene, humanhuman

BASIC

Gene RNU6-478P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-478P-201ENST00000363904 ALDOCP09972 364 aaKnown RBP-0.14□□□□□ -2.43
RNU6-478P-201ENST00000363904 FAM157CP0CG43 387 aa-0.14□□□□□ -2.43
RNU6-478P-201ENST00000363904 NKX2-1P43699 371 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-478P-201ENST00000363904 ZNF133P52736 654 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-478P-201ENST00000363904 SHC2P98077 582 aa-0.14□□□□□ -2.43
RNU6-478P-201ENST00000363904 ARHGEF7Q14155 803 aa-0.14□□□□□ -2.43
RNU6-478P-201ENST00000363904 DHCR24Q15392 516 aa-0.14□□□□□ -2.43
RNU6-478P-201ENST00000363904 DCAF6Q58WW2 860 aa-0.14□□□□□ -2.43
RNU6-478P-201ENST00000363904 TFDP3Q5H9I0 405 aa-0.14□□□□□ -2.43
RNU6-478P-201ENST00000363904 CCBE1Q6UXH8 406 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-478P-201ENST00000363904 GFRALQ6UXV0 394 aa-0.14□□□□□ -2.43
RNU6-478P-201ENST00000363904 KRBA2Q6ZNG9 492 aa-0.14□□□□□ -2.43
RNU6-478P-201ENST00000363904 Q6ZSR9 355 aa-0.14□□□□□ -2.43
RNU6-478P-201ENST00000363904 SLC47A2Q86VL8 602 aa-0.14□□□□□ -2.43
RNU6-478P-201ENST00000363904 RBFAQ8N0V3 343 aa-0.14□□□□□ -2.43
RNU6-478P-201ENST00000363904 ZNF611Q8N823 705 aa-0.14□□□□□ -2.43
RNU6-478P-201ENST00000363904 SLC35A4Q96G79 324 aa-0.14□□□□□ -2.43
RNU6-478P-201ENST00000363904 CFAP57Q96MR6 1250 aa-0.14□□□□□ -2.43
RNU6-478P-201ENST00000363904 GMLQ99445 158 aa-0.14□□□□□ -2.43
RNU6-478P-201ENST00000363904 EIF3CQ99613 913 aaKnown RBP-0.14□□□□□ -2.43
RNU6-478P-201ENST00000363904 ZNF670Q9BS34 389 aa-0.14□□□□□ -2.43
RNU6-478P-201ENST00000363904 NPFFR1Q9GZQ6 430 aa-0.14□□□□□ -2.43
RNU6-478P-201ENST00000363904 OSBPL5Q9H0X9 879 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-478P-201ENST00000363904 TP63Q9H3D4 680 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-478P-201ENST00000363904 TRPC5Q9UL62 973 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-478P-201ENST00000363904 COL1A2P08123 1366 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 KMT2BQ9UMN6 2715 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 CAPN8A6NHC0 703 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 SERPINE3A8MV23 424 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 SOCS3O14543 225 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 WDR1O75083 606 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 HPP00738 406 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 IGKV4-1P06312 121 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 ALADP13716 330 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 ITGA2P17301 1181 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 TPH1P17752 444 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 BCL3P20749 454 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 PTGDSP41222 190 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 ERVK-21P61565 698 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 SLC13A2Q13183 592 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 SQSTM1Q13501 440 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 KCNT1Q5JUK3 1230 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 KPRPQ5T749 579 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 NCAPH2Q6IBW4 605 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 CCDC129Q6ZRS4 1044 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 MDGA2Q7Z553 956 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 SERPINA11Q86U17 422 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 VASH2Q86V25 355 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 ZC3HC1Q86WB0 502 aaKnown RBP-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 ADGRF3Q8IZF5 1079 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 TMEM217Q8N7C4 229 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 OR6B3Q8NGW1 331 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 SUN3Q8TAQ9 357 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 SLC20A1Q8WUM9 679 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 GTF3AQ92664 365 aaKnown RBP-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 SEMA4DQ92854 862 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 NINJ1Q92982 152 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 FAM104AQ969W3 186 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 ARHGEF26Q96DR7 871 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 STK33Q9BYT3 514 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 SLC39A8Q9C0K1 460 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 FAM83DQ9H4H8 585 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 NTN4Q9HB63 628 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 PIH1D1Q9NWS0 290 aaKnown RBP-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 VPS51Q9UID3 782 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 KLK12Q9UKR0 248 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 PLCL2Q9UPR0 1127 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 CNTN6Q9UQ52 1028 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 MMACHCQ9Y4U1 282 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 CD2APQ9Y5K6 639 aa-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 PDS5AQ29RF7 1337 aaKnown RBP-0.15□□□□□ -2.43
RNU6-478P-201ENST00000363904 RP1L1Q8IWN7 2480 aaPredicted RBP-0.16□□□□□ -2.43
RNU6-478P-201ENST00000363904 A0A087WW49 117 aa-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 C3orf70A6NLC5 250 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 DUXAA6NLW8 204 aa-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 RAB27BO00194 218 aa-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 RNMTO43148 476 aaKnown RBP-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 SLCO2B1O94956 709 aa-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 PRB4P10163 310 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 VDRP11473 427 aa-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 HARSP12081 509 aaKnown RBP-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 IL4RP24394 825 aa-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 CLCNKBP51801 687 aa-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 MAP2K6P52564 334 aa-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 EEF1A1P68104 462 aaKnown RBP-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 ARHGAP8P85298 464 aa-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 CKAP4Q07065 602 aaKnown RBP-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 GTDC1Q4AE62 458 aa-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 EEF1A1P5Q5VTE0 462 aa-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 FAM90A2PQ658T7 463 aa-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 TRNP1Q6NT89 227 aa-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 WDR73Q6P4I2 378 aa-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 C11orf96Q7Z7L8 435 aa-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 ZC3H3Q8IXZ2 948 aaKnown RBP-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 NIM1KQ8IY84 436 aa-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 CCDC105Q8IYK2 499 aa-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 EXD3Q8N9H8 876 aa-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 Q8N9L7 120 aa-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 SLC43A3Q8NBI5 491 aa-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 TBC1D22AQ8WUA7 517 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms