RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 CRATP43155 626 aa18.69■□□□□ 0.58
CLIP2-202ENST00000361545 SNAP47Q5SQN1 464 aa18.69■□□□□ 0.58
CLIP2-202ENST00000361545 TMEM26Q6ZUK4 368 aa18.69■□□□□ 0.58
CLIP2-202ENST00000361545 RBFAQ8N0V3 343 aa18.69■□□□□ 0.58
CLIP2-202ENST00000361545 ART4Q93070 314 aa18.69■□□□□ 0.58
CLIP2-202ENST00000361545 TXNRD2Q9NNW7 524 aa18.69■□□□□ 0.58
CLIP2-202ENST00000361545 DDX28Q9NUL7 540 aaKnown RBP18.69■□□□□ 0.58
CLIP2-202ENST00000361545 DUS2Q9NX74 493 aaKnown RBP18.69■□□□□ 0.58
CLIP2-202ENST00000361545 RABGEF1Q9UJ41 708 aa18.69■□□□□ 0.58
CLIP2-202ENST00000361545 RWDD3Q9Y3V2 267 aa18.69■□□□□ 0.58
CLIP2-202ENST00000361545 SGTAO43765 313 aa18.68■□□□□ 0.58
CLIP2-202ENST00000361545 CBX6O95503 412 aa18.68■□□□□ 0.58
CLIP2-202ENST00000361545 CNPP09543 421 aaKnown RBP18.68■□□□□ 0.58
CLIP2-202ENST00000361545 PARP15Q460N3 678 aa18.68■□□□□ 0.58
CLIP2-202ENST00000361545 PPP2R2DQ66LE6 453 aa18.68■□□□□ 0.58
CLIP2-202ENST00000361545 PARGQ86W56 976 aa18.68■□□□□ 0.58
CLIP2-202ENST00000361545 ZSCAN18Q8TBC5 510 aaPredicted RBP18.68■□□□□ 0.58
CLIP2-202ENST00000361545 SRRDQ9UH36 339 aa18.68■□□□□ 0.58
CLIP2-202ENST00000361545 ZFP37Q9Y6Q3 630 aaPredicted RBP18.68■□□□□ 0.58
CLIP2-202ENST00000361545 FCGR1AP12314 374 aa18.68■□□□□ 0.58
CLIP2-202ENST00000361545 PTPN2P17706 415 aa18.68■□□□□ 0.58
CLIP2-202ENST00000361545 IL5RAQ01344 420 aa18.68■□□□□ 0.58
CLIP2-202ENST00000361545 CPSF6Q16630 551 aaKnown RBP eCLIP18.68■□□□□ 0.58
CLIP2-202ENST00000361545 TEX44Q53QW1 395 aa18.68■□□□□ 0.58
CLIP2-202ENST00000361545 POTEHQ6S545 545 aa18.68■□□□□ 0.58
CLIP2-202ENST00000361545 PCDH20Q8N6Y1 951 aaKnown RBP18.68■□□□□ 0.58
CLIP2-202ENST00000361545 STARD8Q92502 1023 aa18.68■□□□□ 0.58
CLIP2-202ENST00000361545 PRRG3Q9BZD7 231 aa18.68■□□□□ 0.58
CLIP2-202ENST00000361545 CCDC159P0C7I6 412 aa18.68■□□□□ 0.58
CLIP2-202ENST00000361545 HSMCR30P0CW71 290 aa18.68■□□□□ 0.58
CLIP2-202ENST00000361545 CORO7P57737 925 aa18.68■□□□□ 0.58
CLIP2-202ENST00000361545 HNRNPABQ99729 332 aaKnown RBP18.68■□□□□ 0.58
CLIP2-202ENST00000361545 LRCH4O75427 683 aa18.68■□□□□ 0.58
CLIP2-202ENST00000361545 ARHGAP1Q07960 439 aa18.68■□□□□ 0.58
CLIP2-202ENST00000361545 TFAP2BQ92481 460 aa18.68■□□□□ 0.58
CLIP2-202ENST00000361545 RERGQ96A58 199 aaPredicted RBP18.68■□□□□ 0.58
CLIP2-202ENST00000361545 RGS5O15539 181 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 ACSL4O60488 711 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 NEK2P51955 445 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 SEC13P55735 322 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 USP39Q53GS9 565 aaKnown RBP18.67■□□□□ 0.58
CLIP2-202ENST00000361545 ADAMTSL2Q86TH1 951 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 KREMEN2Q8NCW0 462 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 OR4K2Q8NGD2 314 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 CAB39LQ9H9S4 337 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 RAI2Q9Y5P3 530 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 IFT172Q9UG01 1749 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 H3BN98 237 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 EPORP19235 508 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 AUHQ13825 339 aaKnown RBP18.67■□□□□ 0.58
CLIP2-202ENST00000361545 TRIP4Q15650 581 aaPredicted RBP18.67■□□□□ 0.58
CLIP2-202ENST00000361545 TAC4Q86UU9 113 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 OSBPL10Q9BXB5 764 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 OXCT2Q9BYC2 517 aaPredicted RBP18.67■□□□□ 0.58
CLIP2-202ENST00000361545 ACE2Q9BYF1 805 aaPredicted RBP18.67■□□□□ 0.58
CLIP2-202ENST00000361545 PCDH12Q9NPG4 1184 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 IL1RAPL1Q9NZN1 696 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 XPR1Q9UBH6 696 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 GULP1Q9UBP9 304 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 GTF2IRD1Q9UHL9 959 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 SLC27A6Q9Y2P4 619 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 SNX10Q9Y5X0 201 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 HNRNPCP07910 306 aaKnown RBP eCLIP18.67■□□□□ 0.58
CLIP2-202ENST00000361545 PSMA3P25788 255 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 PKNOX1P55347 436 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 NOMO1Q15155 1222 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 PYROXD2Q8N2H3 581 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 CCDC185Q8N715 623 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 OR7D4Q8NG98 312 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 OR14C36Q8NHC7 312 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 PROX1Q92786 737 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 EMID1Q96A84 441 aaPredicted RBP18.67■□□□□ 0.58
CLIP2-202ENST00000361545 LPIN3Q9BQK8 851 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 C11orf49Q9H6J7 331 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 ATRNL1Q5VV63 1379 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 MON1BQ7L1V2 547 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 RAVER1Q8IY67 606 aaKnown RBP18.67■□□□□ 0.58
CLIP2-202ENST00000361545 WRAP73Q9P2S5 460 aaPredicted RBP18.67■□□□□ 0.58
CLIP2-202ENST00000361545 TRBV23OR9-2A0A075B6M9 112 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 FAM237BA0A1B0GVD1 139 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 TCRBV9S1A1TA0A576 114 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 ACADSP16219 412 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 RHOQP17081 205 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 GNA13Q14344 377 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 SLC26A9Q7LBE3 791 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 IRGQQ8WZA9 623 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 SIKE1Q9BRV8 207 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 ABCG4Q9H172 646 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 DCLRE1BQ9H816 532 aa18.67■□□□□ 0.58
CLIP2-202ENST00000361545 MLYCDO95822 493 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 PROCP04070 461 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 RPL38P63173 70 aaKnown RBP18.66■□□□□ 0.58
CLIP2-202ENST00000361545 DUPD1Q68J44 220 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 CMC1Q7Z7K0 106 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 NPLOC4Q8TAT6 608 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 PIWIL2Q8TC59 973 aaKnown RBP18.66■□□□□ 0.58
CLIP2-202ENST00000361545 ZNF398Q8TD17 642 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 BTBD10Q9BSF8 475 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 MYLK2Q9H1R3 596 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 APOBEC3GQ9HC16 384 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms