RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 PPM1HQ9ULR3 514 aa22.79■■□□□ 1.24
LDB1-201ENST00000361198 RUVBL2Q9Y230 463 aaKnown RBP22.79■■□□□ 1.24
LDB1-201ENST00000361198 MAGEA13PA6NCF6 341 aa22.79■■□□□ 1.24
LDB1-201ENST00000361198 AURKAO14965 403 aa22.79■■□□□ 1.24
LDB1-201ENST00000361198 GJB3O75712 270 aa22.79■■□□□ 1.24
LDB1-201ENST00000361198 TNK2Q07912 1038 aa22.79■■□□□ 1.24
LDB1-201ENST00000361198 VWA5B1Q5TIE3 1220 aa22.79■■□□□ 1.24
LDB1-201ENST00000361198 NEPROQ6NW34 567 aa22.79■■□□□ 1.24
LDB1-201ENST00000361198 LRRC43Q8N309 656 aa22.79■■□□□ 1.24
LDB1-201ENST00000361198 ZNF781Q8N8C0 355 aa22.79■■□□□ 1.24
LDB1-201ENST00000361198 ACTRT2Q8TDY3 377 aa22.79■■□□□ 1.24
LDB1-201ENST00000361198 CMTM5Q96DZ9 223 aa22.79■■□□□ 1.24
LDB1-201ENST00000361198 NR1H4Q96RI1 486 aaPredicted RBP22.79■■□□□ 1.24
LDB1-201ENST00000361198 TTLL2Q9BWV7 592 aa22.79■■□□□ 1.24
LDB1-201ENST00000361198 YIPF3Q9GZM5 350 aa22.79■■□□□ 1.24
LDB1-201ENST00000361198 UXTQ9UBK9 157 aaPredicted RBP22.79■■□□□ 1.24
LDB1-201ENST00000361198 FBXO5Q9UKT4 447 aa22.79■■□□□ 1.24
LDB1-201ENST00000361198 STMN1P16949 149 aa22.78■■□□□ 1.24
LDB1-201ENST00000361198 OR1D2P34982 312 aa22.78■■□□□ 1.24
LDB1-201ENST00000361198 RAB10P61026 200 aa22.78■■□□□ 1.24
LDB1-201ENST00000361198 POU5F2Q8N7G0 328 aa22.78■■□□□ 1.24
LDB1-201ENST00000361198 GATA5Q9BWX5 397 aaPredicted RBP22.78■■□□□ 1.24
LDB1-201ENST00000361198 ACOT9Q9Y305 439 aa22.78■■□□□ 1.24
LDB1-201ENST00000361198 HSPA4LO95757 839 aa22.78■■□□□ 1.24
LDB1-201ENST00000361198 CD151P48509 253 aa22.78■■□□□ 1.24
LDB1-201ENST00000361198 MAPKAPK2P49137 400 aa22.78■■□□□ 1.24
LDB1-201ENST00000361198 USP4Q13107 963 aa22.78■■□□□ 1.24
LDB1-201ENST00000361198 TSTD2Q5T7W7 516 aa22.78■■□□□ 1.24
LDB1-201ENST00000361198 ACBD5Q5T8D3 534 aaPredicted RBP22.78■■□□□ 1.24
LDB1-201ENST00000361198 SLC8B1Q6J4K2 584 aa22.78■■□□□ 1.24
LDB1-201ENST00000361198 LGI2Q8N0V4 545 aa22.78■■□□□ 1.24
LDB1-201ENST00000361198 FSTL5Q8N475 847 aaPredicted RBP22.78■■□□□ 1.24
LDB1-201ENST00000361198 OR13J1Q8NGT2 312 aa22.78■■□□□ 1.24
LDB1-201ENST00000361198 TADA1Q96BN2 335 aa22.78■■□□□ 1.24
LDB1-201ENST00000361198 TSNARE1Q96NA8 513 aa22.78■■□□□ 1.24
LDB1-201ENST00000361198 TTC1Q99614 292 aa22.78■■□□□ 1.24
LDB1-201ENST00000361198 S100A14Q9HCY8 104 aa22.78■■□□□ 1.24
LDB1-201ENST00000361198 ACSS2Q9NR19 701 aa22.78■■□□□ 1.24
LDB1-201ENST00000361198 BUD23O43709 281 aaKnown RBP22.77■■□□□ 1.24
LDB1-201ENST00000361198 APOA4P06727 396 aa22.77■■□□□ 1.24
LDB1-201ENST00000361198 SLC6A4P31645 630 aa22.77■■□□□ 1.24
LDB1-201ENST00000361198 ALDH7A1P49419 539 aaKnown RBP22.77■■□□□ 1.24
LDB1-201ENST00000361198 KPNA1P52294 538 aaPredicted RBP22.77■■□□□ 1.24
LDB1-201ENST00000361198 ATN1P54259 1190 aaPredicted RBP22.77■■□□□ 1.24
LDB1-201ENST00000361198 YBEYP58557 167 aaPredicted RBP22.77■■□□□ 1.24
LDB1-201ENST00000361198 DSG1Q02413 1049 aa22.77■■□□□ 1.24
LDB1-201ENST00000361198 ZNF789Q5FWF6 425 aa22.77■■□□□ 1.24
LDB1-201ENST00000361198 RALGPS1Q5JS13 557 aa22.77■■□□□ 1.24
LDB1-201ENST00000361198 DEFB128Q7Z7B8 93 aa22.77■■□□□ 1.24
LDB1-201ENST00000361198 SPATA6LQ8N4H0 392 aa22.77■■□□□ 1.24
LDB1-201ENST00000361198 PNPLA1Q8N8W4 532 aa22.77■■□□□ 1.24
LDB1-201ENST00000361198 ELMO2Q96JJ3 720 aa22.77■■□□□ 1.24
LDB1-201ENST00000361198 SCYL1Q96KG9 808 aa22.77■■□□□ 1.24
LDB1-201ENST00000361198 RANBP9Q96S59 729 aa22.77■■□□□ 1.24
LDB1-201ENST00000361198 SLC24A3Q9HC58 644 aa22.77■■□□□ 1.24
LDB1-201ENST00000361198 TRIM17Q9Y577 477 aa22.77■■□□□ 1.24
LDB1-201ENST00000361198 F5H5T6 163 aa22.77■■□□□ 1.23
LDB1-201ENST00000361198 MUSKO15146 869 aa22.77■■□□□ 1.23
LDB1-201ENST00000361198 GJB5O95377 273 aa22.77■■□□□ 1.23
LDB1-201ENST00000361198 PRDX6P30041 224 aa22.77■■□□□ 1.23
LDB1-201ENST00000361198 ATP5C1P36542 298 aaKnown RBP22.77■■□□□ 1.23
LDB1-201ENST00000361198 POLD2P49005 469 aa22.77■■□□□ 1.23
LDB1-201ENST00000361198 TAS2R39P59534 338 aa22.77■■□□□ 1.23
LDB1-201ENST00000361198 IRX1P78414 480 aaPredicted RBP22.77■■□□□ 1.23
LDB1-201ENST00000361198 SIRPB2Q5JXA9 342 aa22.77■■□□□ 1.23
LDB1-201ENST00000361198 CNSTQ6PJW8 725 aa22.77■■□□□ 1.23
LDB1-201ENST00000361198 EPGNQ6UW88 154 aa22.77■■□□□ 1.23
LDB1-201ENST00000361198 IZUMO2Q6UXV1 221 aa22.77■■□□□ 1.23
LDB1-201ENST00000361198 ZYG11AQ6WRX3 759 aa22.77■■□□□ 1.23
LDB1-201ENST00000361198 SHKBP1Q8TBC3 707 aa22.77■■□□□ 1.23
LDB1-201ENST00000361198 SREK1Q8WXA9 508 aaKnown RBP22.77■■□□□ 1.23
LDB1-201ENST00000361198 DEFB118Q96PH6 123 aa22.77■■□□□ 1.23
LDB1-201ENST00000361198 ECSITQ9BQ95 431 aa22.77■■□□□ 1.23
LDB1-201ENST00000361198 VN1R3Q9BXE9 311 aa22.77■■□□□ 1.23
LDB1-201ENST00000361198 PPP1R12CQ9BZL4 782 aa22.77■■□□□ 1.23
LDB1-201ENST00000361198 HIPK3Q9H422 1215 aa22.77■■□□□ 1.23
LDB1-201ENST00000361198 MTRRQ9UBK8 725 aa22.77■■□□□ 1.23
LDB1-201ENST00000361198 MID2Q9UJV3 735 aa22.77■■□□□ 1.23
LDB1-201ENST00000361198 DNMT3LQ9UJW3 386 aa22.77■■□□□ 1.23
LDB1-201ENST00000361198 A0A0D9SEW6 157 aa22.76■■□□□ 1.23
LDB1-201ENST00000361198 TMEM114B3SHH9 223 aa22.76■■□□□ 1.23
LDB1-201ENST00000361198 PRAMEF11O60813 436 aa22.76■■□□□ 1.23
LDB1-201ENST00000361198 COL6A2P12110 1019 aa22.76■■□□□ 1.23
LDB1-201ENST00000361198 DLG1Q12959 904 aa22.76■■□□□ 1.23
LDB1-201ENST00000361198 METTL21CQ5VZV1 264 aa22.76■■□□□ 1.23
LDB1-201ENST00000361198 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.76■■□□□ 1.23
LDB1-201ENST00000361198 LCA5Q86VQ0 697 aa22.76■■□□□ 1.23
LDB1-201ENST00000361198 RDH11Q8TC12 318 aa22.76■■□□□ 1.23
LDB1-201ENST00000361198 STYXQ8WUJ0 223 aa22.76■■□□□ 1.23
LDB1-201ENST00000361198 NXNL1Q96CM4 212 aa22.76■■□□□ 1.23
LDB1-201ENST00000361198 ZNF512Q96ME7 567 aaPredicted RBP22.76■■□□□ 1.23
LDB1-201ENST00000361198 GPR78Q96P69 363 aa22.76■■□□□ 1.23
LDB1-201ENST00000361198 SEMA3CQ99985 751 aa22.76■■□□□ 1.23
LDB1-201ENST00000361198 UNKQ9C0B0 810 aaKnown RBP22.76■■□□□ 1.23
LDB1-201ENST00000361198 CDH19Q9H159 772 aa22.76■■□□□ 1.23
LDB1-201ENST00000361198 MKI67P46013 3256 aaKnown RBP22.75■■□□□ 1.23
LDB1-201ENST00000361198 TARM1B6A8C7 271 aa22.75■■□□□ 1.23
LDB1-201ENST00000361198 EFEMP2O95967 443 aa22.75■■□□□ 1.23
LDB1-201ENST00000361198 CXCL10P02778 98 aa22.75■■□□□ 1.23
LDB1-201ENST00000361198 ATXN1LP0C7T5 689 aaKnown RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms