RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 DOT1LQ8TEK3 1739 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 SLC5A3P53794 718 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 KCNJ11Q14654 390 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 DENND6AQ8IWF6 608 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 DSELQ8IZU8 1212 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 DDHD1Q8NEL9 900 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 ITFG1Q8TB96 612 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 PCYT2Q99447 389 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 MLPHQ9BV36 600 aaPredicted RBP16.44■□□□□ 0.22
SCAF1-201ENST00000360565 CACNG4Q9UBN1 327 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 ANAPC2Q9UJX6 822 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 CCDC88AQ3V6T2 1871 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 CD3EAPO15446 510 aaKnown RBP16.44■□□□□ 0.22
SCAF1-201ENST00000360565 HCRTO43612 131 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 DDX5P17844 614 aaKnown RBP16.44■□□□□ 0.22
SCAF1-201ENST00000360565 PRKD1Q15139 912 aaPredicted RBP16.44■□□□□ 0.22
SCAF1-201ENST00000360565 HECTD3Q5T447 861 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 MAGEE2Q8TD90 523 aaPredicted RBP16.44■□□□□ 0.22
SCAF1-201ENST00000360565 SLC9A7Q96T83 725 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 EMILIN2Q9BXX0 1053 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 XYLT2Q9H1B5 865 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 NT5C1B-RDH14C9J2C7 533 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 FZD9O00144 591 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 KDM1AO60341 852 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 LINC00032P0C843 101 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 COL6A2P12110 1019 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 S100A5P33763 92 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 TRPC1P48995 793 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 HK2P52789 917 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 IL5RAQ01344 420 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 C1orf50Q9BV19 199 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 DNMT3LQ9UJW3 386 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 PCDHB12Q9Y5F1 795 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 IRS2Q9Y4H2 1338 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 A0A087WXM4 84 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 IPO13O94829 963 aaKnown RBP16.44■□□□□ 0.22
SCAF1-201ENST00000360565 ATG7O95352 703 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 PSEN1P49768 467 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 TARBP2Q15633 366 aaKnown RBP16.44■□□□□ 0.22
SCAF1-201ENST00000360565 INTS6LQ5JSJ4 861 aaKnown RBP16.44■□□□□ 0.22
SCAF1-201ENST00000360565 OLFML1Q6UWY5 402 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 OR4L1Q8NH43 312 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 TEKT5Q96M29 485 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 PEBP4Q96S96 227 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 ASB8Q9H765 288 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 IGSF9Q9P2J2 1179 aa16.44■□□□□ 0.22
SCAF1-201ENST00000360565 AKAP11Q9UKA4 1901 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 SH3BGRLO75368 114 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 FGF1P05230 155 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 WNT7BP56706 349 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 SIX1Q15475 284 aaPredicted RBP16.43■□□□□ 0.22
SCAF1-201ENST00000360565 EMC10Q5UCC4 262 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 ZDHHC13Q8IUH4 622 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 ZDHHC14Q8IZN3 488 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 STK40Q8N2I9 435 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 FSTL5Q8N475 847 aaPredicted RBP16.43■□□□□ 0.22
SCAF1-201ENST00000360565 SLC25A13Q9UJS0 675 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 FBXW11Q9UKB1 542 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 TRPM3Q9HCF6 1732 aaPredicted RBP16.43■□□□□ 0.22
SCAF1-201ENST00000360565 FFAR3O14843 346 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 GPR42O15529 346 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 NRP2O60462 931 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 STAU1O95793 577 aaKnown RBP16.43■□□□□ 0.22
SCAF1-201ENST00000360565 ETS2P15036 469 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 HLA-DPA1P20036 260 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 CYP3A5P20815 502 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 IDH3AP50213 366 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 MAPK10P53779 464 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 TAS2R39P59534 338 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 TAF10Q12962 218 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 MAD2L1Q13257 205 aaPredicted RBP16.43■□□□□ 0.22
SCAF1-201ENST00000360565 BLMHQ13867 455 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 ZNF460Q14592 562 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 C15orf39Q6ZRI6 1047 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 C11orf96Q7Z7L8 435 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 IGDCC3Q8IVU1 814 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 SLC35F5Q8WV83 523 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 TBATAQ96M53 351 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 TRMOQ9BU70 441 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 DNAJC28Q9NX36 388 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 ARL15Q9NXU5 204 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 SH3BP4Q9P0V3 963 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 ADAMTSL3P82987 1691 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 PTGES3LE9PB15 166 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 F8W810 466 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 MAN1A2O60476 641 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 RPL5P46777 297 aaKnown RBP16.43■□□□□ 0.22
SCAF1-201ENST00000360565 PCYT1AP49585 367 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 HECTD2Q5U5R9 776 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 RNF220Q5VTB9 566 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 FBXO30Q8TB52 745 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 PIGVQ9NUD9 493 aa16.43■□□□□ 0.22
SCAF1-201ENST00000360565 TNPO3Q9Y5L0 923 aaKnown RBP16.43■□□□□ 0.22
SCAF1-201ENST00000360565 SF3B1O75533 1304 aaKnown RBP eCLIP16.42■□□□□ 0.227e-7■■■■■ 68
SCAF1-201ENST00000360565 LZTS3O60299 673 aaPredicted RBP16.42■□□□□ 0.22
SCAF1-201ENST00000360565 F7P08709 466 aaPredicted RBP16.42■□□□□ 0.22
SCAF1-201ENST00000360565 UQCRBP14927 111 aa16.42■□□□□ 0.22
SCAF1-201ENST00000360565 NELFEP18615 380 aaKnown RBP16.42■□□□□ 0.22
SCAF1-201ENST00000360565 CCNCP24863 283 aa16.42■□□□□ 0.22
SCAF1-201ENST00000360565 TTPAP49638 278 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms