RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 TMCO4Q5TGY1 634 aa6.04□□□□□ -1.44
CDC42SE2-201ENST00000360515 PMF1Q6P1K2 205 aa6.04□□□□□ -1.44
CDC42SE2-201ENST00000360515 SYVN1Q86TM6 617 aa6.04□□□□□ -1.44
CDC42SE2-201ENST00000360515 FBXL13Q8NEE6 735 aa6.04□□□□□ -1.44
CDC42SE2-201ENST00000360515 GANCQ8TET4 914 aa6.04□□□□□ -1.44
CDC42SE2-201ENST00000360515 ZNF641Q96N77 438 aaPredicted RBP6.04□□□□□ -1.44
CDC42SE2-201ENST00000360515 INSM2Q96T92 566 aaPredicted RBP6.04□□□□□ -1.44
CDC42SE2-201ENST00000360515 THAP9Q9H5L6 903 aa6.04□□□□□ -1.44
CDC42SE2-201ENST00000360515 RAB20Q9NX57 234 aa6.04□□□□□ -1.44
CDC42SE2-201ENST00000360515 NF1P21359 2839 aa6.04□□□□□ -1.44
CDC42SE2-201ENST00000360515 DNHD1Q96M86 4753 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 CPED1A4D0V7 1026 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 MSI1O43347 362 aaKnown RBP6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 CALUO43852 315 aaPredicted RBP6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 CUTAO60888 179 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 PHACTR2O75167 634 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 PDGFAP04085 211 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 KELP23276 732 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 CSF2RBP32927 897 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 HTR7P34969 479 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 THOP1P52888 689 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 MARSP56192 900 aaKnown RBP6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 ARF5P84085 180 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 IFRD2Q12894 506 aaPredicted RBP6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 INAQ16352 499 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 IZUMO3Q5VZ72 239 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 KRBA2Q6ZNG9 492 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 Q6ZVU0 165 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 ZNF765Q7L2R6 523 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 LGI2Q8N0V4 545 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 GUF1Q8N442 669 aaKnown RBP6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 KIAA1143Q96AT1 154 aaPredicted RBP6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 NACC2Q96BF6 587 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 FAM81BQ96LP2 452 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 MED15Q96RN5 788 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 NPY6RQ99463 290 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 CALN1Q9BXU9 219 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 TRIM8Q9BZR9 551 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 IMPG2Q9BZV3 1241 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 LRRC4Q9HBW1 653 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 EPHA6Q9UF33 1036 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 UTP20O75691 2785 aaKnown RBP6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 C16orf96A6NNT2 1141 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 MUSKO15146 869 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 EXOC3O60645 756 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 LEFTY1O75610 366 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 NEBLO76041 1014 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 IRF4Q15306 451 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 ZNF324BQ6AW86 544 aaPredicted RBP6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 IQUBQ8NA54 791 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 OR8K5Q8NH50 307 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 SPOCK3Q9BQ16 436 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 SLC12A6Q9UHW9 1150 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 KCND3Q9UK17 655 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 TLK1Q9UKI8 766 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 HS3ST4Q9Y661 456 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 SPTA1P02549 2419 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 A0A0U1RQS6 177 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 A0A1W2PQ67 120 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 CDK2AP1O14519 115 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 ZRANB2O95218 330 aaKnown RBP eCLIP6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 POP4O95707 220 aaKnown RBP6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 KRT7P08729 469 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 CD1EP15812 388 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 PDGFRAP16234 1089 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 PRLRP16471 622 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 ITIH1P19827 911 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 CCR1P32246 355 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 MMP12P39900 470 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 CASP4P49662 377 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 AUHQ13825 339 aaKnown RBP6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 CCDC157Q569K6 752 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 SPOPLQ6IQ16 392 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 JMJD6Q6NYC1 403 aaPredicted RBP6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 SLC26A9Q7LBE3 791 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 IRF2BP1Q8IU81 584 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 SIX6OS1Q8N1H7 587 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 PCDH19Q8TAB3 1148 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 COQ10AQ96MF6 247 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 ZSCAN16Q9H4T2 348 aaPredicted RBP6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 SARS2Q9NP81 518 aaKnown RBP6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 B3GALT1Q9Y5Z6 326 aa6.03□□□□□ -1.44
CDC42SE2-201ENST00000360515 APCP25054 2843 aa6.02□□□□□ -1.44
CDC42SE2-201ENST00000360515 TM7SF2O76062 418 aa6.02□□□□□ -1.45
CDC42SE2-201ENST00000360515 HMBSP08397 361 aa6.02□□□□□ -1.45
CDC42SE2-201ENST00000360515 EIF4A3P38919 411 aaKnown RBP6.02□□□□□ -1.45
CDC42SE2-201ENST00000360515 RALGDSQ12967 914 aa6.02□□□□□ -1.45
CDC42SE2-201ENST00000360515 LRP8Q14114 963 aa6.02□□□□□ -1.45
CDC42SE2-201ENST00000360515 INPP5JQ15735 1006 aaPredicted RBP6.02□□□□□ -1.45
CDC42SE2-201ENST00000360515 RESP18Q5W5W9 173 aa6.02□□□□□ -1.45
CDC42SE2-201ENST00000360515 B3GNTL1Q67FW5 361 aaPredicted RBP6.02□□□□□ -1.45
CDC42SE2-201ENST00000360515 DPY19L3Q6ZPD9 716 aa6.02□□□□□ -1.45
CDC42SE2-201ENST00000360515 PIM3Q86V86 326 aa6.02□□□□□ -1.45
CDC42SE2-201ENST00000360515 PTRH1Q86Y79 214 aaKnown RBP6.02□□□□□ -1.45
CDC42SE2-201ENST00000360515 CHST14Q8NCH0 376 aa6.02□□□□□ -1.45
CDC42SE2-201ENST00000360515 LINC00301Q8NCQ3 95 aa6.02□□□□□ -1.45
CDC42SE2-201ENST00000360515 CCDC150Q8NCX0 1101 aa6.02□□□□□ -1.45
CDC42SE2-201ENST00000360515 C3orf20Q8ND61 904 aa6.02□□□□□ -1.45
CDC42SE2-201ENST00000360515 STARD8Q92502 1023 aa6.02□□□□□ -1.45
CDC42SE2-201ENST00000360515 RNF34Q969K3 372 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms