RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 TRIM17Q9Y577 477 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 ABHD14A-ACY1A0A1B0GW23 586 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 PIRTP0C851 137 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 CLCN5P51795 746 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 RAB10P61026 200 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 MAXP61244 160 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 PUDPQ08623 228 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 LYPLAL1Q5VWZ2 237 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 ABRAXAS1Q6UWZ7 409 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 TSPAN14Q8NG11 270 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 SNRNP25Q9BV90 132 aaKnown RBP18.49■□□□□ 0.55
SHANK1-202ENST00000359082 ITGA2P17301 1181 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 ADSSP30520 456 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 CHKAP35790 457 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 NAGLUP54802 743 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 HPS6Q86YV9 775 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 ATL1Q8WXF7 558 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 HMX1Q9NP08 348 aaPredicted RBP18.48■□□□□ 0.55
SHANK1-202ENST00000359082 MCUBQ9NWR8 336 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 ADAM28Q9UKQ2 775 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 HES2Q9Y543 173 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 FTH1P02794 183 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 TTPAP49638 278 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 PDK3Q15120 406 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 QPRTQ15274 297 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 TEX47Q8TBZ9 253 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 HELQQ8TDG4 1101 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 SEC24AO95486 1093 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 CYP1A2P05177 515 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 RPL9P32969 192 aaKnown RBP18.48■□□□□ 0.55
SHANK1-202ENST00000359082 PABPC1LQ4VXU2 614 aaKnown RBP18.48■□□□□ 0.55
SHANK1-202ENST00000359082 RASAL3Q86YV0 1011 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 COPS5Q92905 334 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 FAM192AQ9GZU8 254 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 MCIDASD6RGH6 385 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 SLC28A2O43868 658 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 OAZ1P54368 228 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 ATG14Q6ZNE5 492 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 GPRIN3Q6ZVF9 776 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 CREG2Q8IUH2 290 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 PPP3R2Q96LZ3 170 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 MYOCQ99972 504 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 AASDHPPTQ9NRN7 309 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 ISM1B1AKI9 464 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 IL1BP01584 269 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 SLC26A3P40879 764 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 ZNF143P52747 638 aaPredicted RBP18.48■□□□□ 0.55
SHANK1-202ENST00000359082 PTPN5P54829 565 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 PAGE2Q7Z2X7 111 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 CKAP2Q8WWK9 683 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 MTFR1LQ9H019 292 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 PORCNQ9H237 461 aa18.48■□□□□ 0.55
SHANK1-202ENST00000359082 ADAMTS13Q76LX8 1427 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 CHRNGP07510 517 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 ADRB2P07550 413 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 ATP4AP20648 1035 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 LGALS3BPQ08380 585 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 EPS8Q12929 822 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 RNASE12Q5GAN4 147 aaKnown RBP18.47■□□□□ 0.55
SHANK1-202ENST00000359082 OLFML2AQ68BL7 652 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 ALYREFQ86V81 257 aaKnown RBP18.47■□□□□ 0.55
SHANK1-202ENST00000359082 EXOC2Q96KP1 924 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 POLR3HQ9Y535 204 aaPredicted RBP18.47■□□□□ 0.55
SHANK1-202ENST00000359082 SMIM10L2AP0DMW4 78 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 SMIM10L2BP0DMW5 78 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 HOXB8P17481 243 aaPredicted RBP18.47■□□□□ 0.55
SHANK1-202ENST00000359082 ATP5F1P24539 256 aaPredicted RBP18.47■□□□□ 0.55
SHANK1-202ENST00000359082 TNFSF9P41273 254 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 RGS21Q2M5E4 152 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 POC5Q8NA72 575 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 NKX2-3Q8TAU0 364 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 PIWIL2Q8TC59 973 aaKnown RBP18.47■□□□□ 0.55
SHANK1-202ENST00000359082 GPR152Q8TDT2 470 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 OXCT2Q9BYC2 517 aaPredicted RBP18.47■□□□□ 0.55
SHANK1-202ENST00000359082 ASAH2Q9NR71 780 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 RBM7Q9Y580 266 aaKnown RBP18.47■□□□□ 0.55
SHANK1-202ENST00000359082 C1QTNF3-AMACRE9PGA6 284 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 TRIM38O00635 465 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 KPNA5O15131 536 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 PTPRAP18433 802 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 TAS2R41P59536 307 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 CELF3Q5SZQ8 465 aaKnown RBP18.47■□□□□ 0.55
SHANK1-202ENST00000359082 NETO2Q8NC67 525 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 TRMT13Q9NUP7 481 aaKnown RBP18.47■□□□□ 0.55
SHANK1-202ENST00000359082 TNFSF13BQ9Y275 285 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 ERGIC3Q9Y282 383 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 CEMIPQ8WUJ3 1361 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 GOT1P17174 413 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 PPP3CAQ08209 521 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 ATP13A4Q4VNC1 1196 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 DEFB132Q7Z7B7 95 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 FAM124AQ86V42 546 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 NEK7Q8TDX7 302 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 GPC6Q9Y625 555 aaPredicted RBP18.47■□□□□ 0.55
SHANK1-202ENST00000359082 ULK1O75385 1050 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 ERAL1O75616 437 aaKnown RBP18.47■□□□□ 0.55
SHANK1-202ENST00000359082 OR5F1O95221 314 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 ZNF135P52742 658 aaPredicted RBP18.47■□□□□ 0.55
SHANK1-202ENST00000359082 FAAH2Q6GMR7 532 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 LIN54Q6MZP7 749 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms