RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 SCNN1BP51168 640 aa13.4□□□□□ -0.26
NFIX-201ENST00000358552 ELF3P78545 371 aaPredicted RBP13.4□□□□□ -0.26
NFIX-201ENST00000358552 ZXDBP98169 803 aa13.4□□□□□ -0.26
NFIX-201ENST00000358552 BNIP1Q12981 228 aa13.4□□□□□ -0.26
NFIX-201ENST00000358552 TEAD2Q15562 447 aa13.4□□□□□ -0.26
NFIX-201ENST00000358552 PCSK7Q16549 785 aa13.4□□□□□ -0.26
NFIX-201ENST00000358552 DUSP6Q16828 381 aa13.4□□□□□ -0.26
NFIX-201ENST00000358552 HSP90AA5PQ58FG0 334 aa13.4□□□□□ -0.26
NFIX-201ENST00000358552 TSTD2Q5T7W7 516 aa13.4□□□□□ -0.26
NFIX-201ENST00000358552 STRA8Q7Z7C7 330 aa13.4□□□□□ -0.26
NFIX-201ENST00000358552 BBS7Q8IWZ6 715 aa13.4□□□□□ -0.26
NFIX-201ENST00000358552 STYXQ8WUJ0 223 aa13.4□□□□□ -0.26
NFIX-201ENST00000358552 PTPRN2Q92932 1015 aa13.4□□□□□ -0.26
NFIX-201ENST00000358552 RHOJQ9H4E5 214 aa13.4□□□□□ -0.26
NFIX-201ENST00000358552 SFXN1Q9H9B4 322 aa13.4□□□□□ -0.26
NFIX-201ENST00000358552 ABCB8Q9NUT2 735 aa13.4□□□□□ -0.26
NFIX-201ENST00000358552 FGFR1OP2Q9NVK5 253 aa13.4□□□□□ -0.26
NFIX-201ENST00000358552 MARK1Q9P0L2 795 aa13.4□□□□□ -0.26
NFIX-201ENST00000358552 MID2Q9UJV3 735 aa13.4□□□□□ -0.26
NFIX-201ENST00000358552 CORO1CQ9ULV4 474 aaPredicted RBP13.4□□□□□ -0.26
NFIX-201ENST00000358552 MRPS23Q9Y3D9 190 aaKnown RBP13.4□□□□□ -0.26
NFIX-201ENST00000358552 HCFC2Q9Y5Z7 792 aa13.4□□□□□ -0.26
NFIX-201ENST00000358552 TRIOBPQ9H2D6 2365 aa13.4□□□□□ -0.26
NFIX-201ENST00000358552 C2orf81A6NN90 581 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 GLRA3O75311 464 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 RFPL1O75677 317 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 RFPL2O75678 378 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 PENKP01210 267 aaPredicted RBP13.39□□□□□ -0.27
NFIX-201ENST00000358552 PYGBP11216 843 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 NQO1P15559 274 aaKnown RBP13.39□□□□□ -0.27
NFIX-201ENST00000358552 EPCAMP16422 314 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 NMBRP28336 390 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 RPA3P35244 121 aaPredicted RBP13.39□□□□□ -0.27
NFIX-201ENST00000358552 IRS1P35568 1242 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 ARF5P84085 180 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 CYTH1Q15438 398 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 SIRPB2Q5JXA9 342 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 MROH9Q5TGP6 573 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 NDUFAF2Q8N183 169 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 GIMAP7Q8NHV1 300 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 MGARPQ8TDB4 240 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 TCP10LQ8TDR4 215 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 LRRC8CQ8TDW0 803 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 SREK1Q8WXA9 508 aaKnown RBP13.39□□□□□ -0.27
NFIX-201ENST00000358552 WBP2Q969T9 261 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 ALG14Q96F25 216 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 CEP44Q9C0F1 390 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 PIH1D1Q9NWS0 290 aaKnown RBP13.39□□□□□ -0.27
NFIX-201ENST00000358552 OBP2AQ9NY56 170 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 ANKRD6Q9Y2G4 727 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 PLLPQ9Y342 182 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 USH1CQ9Y6N9 552 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 BIRC5O15392 142 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 SOCS5O75159 536 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 SPAG7O75391 227 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 MOSPD3O75425 235 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 TMCC1O94876 653 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 APOA4P06727 396 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 ATXN1LP0C7T5 689 aaKnown RBP13.39□□□□□ -0.27
NFIX-201ENST00000358552 COL6A2P12110 1019 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 TYK2P29597 1187 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 CSKP41240 450 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 ARCN1P48444 511 aaKnown RBP13.39□□□□□ -0.27
NFIX-201ENST00000358552 VASPP50552 380 aaPredicted RBP13.39□□□□□ -0.27
NFIX-201ENST00000358552 SGSHP51688 502 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 NEK3P51956 506 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 RHOAP61586 193 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 ACVR1Q04771 509 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 RAD51Q06609 339 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 USP4Q13107 963 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 MSLNQ13421 630 aaPredicted RBP13.39□□□□□ -0.27
NFIX-201ENST00000358552 MPP2Q14168 576 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 CCDC153Q494R4 210 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 NEPROQ6NW34 567 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 NCEH1Q6PIU2 408 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 LVRNQ6Q4G3 990 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 CHRDL2Q6WN34 429 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 PLPP6Q8IY26 295 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 OR52K2Q8NGK3 314 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 IRF7Q92985 503 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 E2F7Q96AV8 911 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 KLHL29Q96CT2 875 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 SERAC1Q96JX3 654 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 TSNARE1Q96NA8 513 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 TDRD1Q9BXT4 1180 aaKnown RBP13.39□□□□□ -0.27
NFIX-201ENST00000358552 MFSD1Q9H3U5 465 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 CERS4Q9HA82 394 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 NOD2Q9HC29 1040 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 VPS51Q9UID3 782 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 VPS9D1Q9Y2B5 631 aa13.39□□□□□ -0.27
NFIX-201ENST00000358552 KLF11O14901 512 aa13.38□□□□□ -0.27
NFIX-201ENST00000358552 WFS1O76024 890 aa13.38□□□□□ -0.27
NFIX-201ENST00000358552 VAPBO95292 243 aa13.38□□□□□ -0.27
NFIX-201ENST00000358552 ATP6V1G2O95670 118 aa13.38□□□□□ -0.27
NFIX-201ENST00000358552 DHRS4L1P0CG22 281 aa13.38□□□□□ -0.27
NFIX-201ENST00000358552 PSMA3P25788 255 aa13.38□□□□□ -0.27
NFIX-201ENST00000358552 CCR2P41597 374 aa13.38□□□□□ -0.27
NFIX-201ENST00000358552 WDR4P57081 412 aaKnown RBP13.38□□□□□ -0.27
NFIX-201ENST00000358552 PRAMEP78395 509 aa13.38□□□□□ -0.27
NFIX-201ENST00000358552 MLLT1Q03111 559 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms