RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 BRAT1Q6PJG6 821 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 KDELC2Q7Z4H8 507 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 VOPP1Q96AW1 172 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 GORASP1Q9BQQ3 440 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 TRIM51Q9BSJ1 452 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 TPSD1Q9BZJ3 242 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 ETNK1Q9HBU6 452 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 FBXL12Q9NXK8 326 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 CHKBQ9Y259 395 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 NEU2Q9Y3R4 380 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 THADAQ6YHU6 1953 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 A0A1W2PQ67 120 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 C16orf96A6NNT2 1141 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 TRAFD1O14545 582 aaPredicted RBP15.37■□□□□ 0.05
TPM1-206ENST00000358278 RAD51CO43502 376 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 RNASEH2AO75792 299 aaKnown RBP15.37■□□□□ 0.05
TPM1-206ENST00000358278 PGLSO95336 258 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 CPP00450 1065 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 APRTP07741 180 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 ADCY8P40145 1251 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 MRPS25P82663 173 aaKnown RBP15.37■□□□□ 0.05
TPM1-206ENST00000358278 CCDC15Q0P6D6 951 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 FBXL19Q6PCT2 694 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 TSSK4Q6SA08 328 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 KDELC1Q6UW63 502 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 PARS2Q7L3T8 475 aaKnown RBP15.37■□□□□ 0.05
TPM1-206ENST00000358278 RASSF3Q86WH2 238 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 HDDC3Q8N4P3 179 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 AADATQ8N5Z0 425 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 ARRDC3Q96B67 414 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 TADA1Q96BN2 335 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 ECHDC3Q96DC8 303 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 MLPHQ9BV36 600 aaPredicted RBP15.37■□□□□ 0.05
TPM1-206ENST00000358278 ADGRE3Q9BY15 652 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 DKK3Q9UBP4 350 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 EBF1Q9UH73 591 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 NCKAP1Q9Y2A7 1128 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 FAM187AA6NFU0 413 aa15.36■□□□□ 0.05
TPM1-206ENST00000358278 PLK4O00444 970 aa15.36■□□□□ 0.05
TPM1-206ENST00000358278 DRD3P35462 400 aa15.36■□□□□ 0.05
TPM1-206ENST00000358278 TPMTP51580 245 aa15.36■□□□□ 0.05
TPM1-206ENST00000358278 NEK3P51956 506 aa15.36■□□□□ 0.05
TPM1-206ENST00000358278 POLR2LP62875 67 aaKnown RBP15.36■□□□□ 0.05
TPM1-206ENST00000358278 CSTF1Q05048 431 aaKnown RBP15.36■□□□□ 0.05
TPM1-206ENST00000358278 CDK18Q07002 472 aa15.36■□□□□ 0.05
TPM1-206ENST00000358278 CNTN1Q12860 1018 aa15.36■□□□□ 0.05
TPM1-206ENST00000358278 SEMA5AQ13591 1074 aa15.36■□□□□ 0.05
TPM1-206ENST00000358278 CCDC70Q6NSX1 233 aa15.36■□□□□ 0.05
TPM1-206ENST00000358278 ERN2Q76MJ5 926 aaKnown RBP15.36■□□□□ 0.05
TPM1-206ENST00000358278 KBTBD6Q86V97 674 aa15.36■□□□□ 0.05
TPM1-206ENST00000358278 PDCD7Q8N8D1 485 aaKnown RBP15.36■□□□□ 0.05
TPM1-206ENST00000358278 NOA1Q8NC60 698 aaKnown RBP15.36■□□□□ 0.05
TPM1-206ENST00000358278 LPCAT1Q8NF37 534 aa15.36■□□□□ 0.05
TPM1-206ENST00000358278 HCAR2Q8TDS4 363 aa15.36■□□□□ 0.05
TPM1-206ENST00000358278 RMDN1Q96DB5 314 aa15.36■□□□□ 0.05
TPM1-206ENST00000358278 FEM1CQ96JP0 617 aa15.36■□□□□ 0.05
TPM1-206ENST00000358278 MRGPRX2Q96LB1 330 aa15.36■□□□□ 0.05
TPM1-206ENST00000358278 FICDQ9BVA6 458 aa15.36■□□□□ 0.05
TPM1-206ENST00000358278 HDAC8Q9BY41 377 aa15.36■□□□□ 0.05
TPM1-206ENST00000358278 LRRC40Q9H9A6 602 aa15.36■□□□□ 0.05
TPM1-206ENST00000358278 ARIH1Q9Y4X5 557 aaPredicted RBP15.36■□□□□ 0.05
TPM1-206ENST00000358278 ABCA7Q8IZY2 2146 aa15.35■□□□□ 0.05
TPM1-206ENST00000358278 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.35■□□□□ 0.05
TPM1-206ENST00000358278 TSPAN11A1L157 253 aa15.35■□□□□ 0.05
TPM1-206ENST00000358278 ERI2A8K979 691 aaKnown RBP15.35■□□□□ 0.05
TPM1-206ENST00000358278 AXIN1O15169 862 aa15.35■□□□□ 0.05
TPM1-206ENST00000358278 PSMD3O43242 534 aa15.35■□□□□ 0.05
TPM1-206ENST00000358278 ZNF217O75362 1048 aa15.35■□□□□ 0.05
TPM1-206ENST00000358278 AP2A1O95782 977 aa15.35■□□□□ 0.05
TPM1-206ENST00000358278 PDHA1P08559 390 aa15.35■□□□□ 0.05
TPM1-206ENST00000358278 ADRB3P13945 408 aa15.35■□□□□ 0.05
TPM1-206ENST00000358278 P2RY2P41231 377 aa15.35■□□□□ 0.05
TPM1-206ENST00000358278 GALNT3Q14435 633 aa15.35■□□□□ 0.05
TPM1-206ENST00000358278 LRRC73Q5JTD7 316 aa15.35■□□□□ 0.05
TPM1-206ENST00000358278 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.35■□□□□ 0.05
TPM1-206ENST00000358278 USP30Q70CQ3 517 aa15.35■□□□□ 0.05
TPM1-206ENST00000358278 TTC7BQ86TV6 843 aa15.35■□□□□ 0.05
TPM1-206ENST00000358278 FAM124AQ86V42 546 aa15.35■□□□□ 0.05
TPM1-206ENST00000358278 ZSWIM9Q86XI8 627 aa15.35■□□□□ 0.05
TPM1-206ENST00000358278 MMGT1Q8N4V1 131 aa15.35■□□□□ 0.05
TPM1-206ENST00000358278 TRIM31Q9BZY9 425 aa15.35■□□□□ 0.05
TPM1-206ENST00000358278 CD93Q9NPY3 652 aa15.35■□□□□ 0.05
TPM1-206ENST00000358278 SERGEFQ9UGK8 458 aa15.35■□□□□ 0.05
TPM1-206ENST00000358278 FZD4Q9ULV1 537 aa15.35■□□□□ 0.05
TPM1-206ENST00000358278 UTP11Q9Y3A2 253 aaKnown RBP15.35■□□□□ 0.05
TPM1-206ENST00000358278 SCN8AQ9UQD0 1980 aa15.35■□□□□ 0.05
TPM1-206ENST00000358278 FANCMQ8IYD8 2048 aa15.35■□□□□ 0.05
TPM1-206ENST00000358278 UPK3BL1B0FP48 263 aa15.34■□□□□ 0.05
TPM1-206ENST00000358278 UPK3BL2E5RIL1 263 aa15.34■□□□□ 0.05
TPM1-206ENST00000358278 NDST3O95803 873 aa15.34■□□□□ 0.05
TPM1-206ENST00000358278 C7P10643 843 aa15.34■□□□□ 0.05
TPM1-206ENST00000358278 NFKBIAP25963 317 aa15.34■□□□□ 0.05
TPM1-206ENST00000358278 GRIA4P48058 902 aa15.34■□□□□ 0.05
TPM1-206ENST00000358278 RPL26P61254 145 aaKnown RBP15.34■□□□□ 0.05
TPM1-206ENST00000358278 SPARCL1Q14515 664 aa15.34■□□□□ 0.05
TPM1-206ENST00000358278 UGP2Q16851 508 aa15.34■□□□□ 0.05
TPM1-206ENST00000358278 AGBL4Q5VU57 503 aa15.34■□□□□ 0.05
TPM1-206ENST00000358278 NAPEPLDQ6IQ20 393 aa15.34■□□□□ 0.05
TPM1-206ENST00000358278 NDUFAF2Q8N183 169 aa15.34■□□□□ 0.05
TPM1-206ENST00000358278 TBL1YQ9BQ87 522 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms