RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 DLL1O00548 723 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 KRT37O76014 449 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 SRP72O76094 671 aaKnown RBP9.26□□□□□ -0.93
UPF2-202ENST00000357604 CCNDBP1O95273 360 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 DDX5P17844 614 aaKnown RBP9.26□□□□□ -0.93
UPF2-202ENST00000357604 RBL1P28749 1068 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 CCR2P41597 374 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 DOK6Q6PKX4 331 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 SYT13Q7L8C5 426 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 SH2D3CQ8N5H7 860 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 ERLEC1Q96DZ1 483 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 FMO2Q99518 471 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 PLCD4Q9BRC7 762 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 NKIRAS1Q9NYS0 192 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 STOML2Q9UJZ1 356 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 ITGB7P26010 798 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 GGCXP38435 758 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 SOX9P48436 509 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 EIF2B5Q13144 721 aaKnown RBP9.26□□□□□ -0.93
UPF2-202ENST00000357604 PLCL1Q15111 1095 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 TAF1AQ15573 450 aaPredicted RBP9.26□□□□□ -0.93
UPF2-202ENST00000357604 CCDC142Q17RM4 750 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 ASTE1Q2TB18 679 aaPredicted RBP9.26□□□□□ -0.93
UPF2-202ENST00000357604 NCBP2-AS2Q69YL0 99 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 LRRC8EQ6NSJ5 796 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 NPNTQ6UXI9 565 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.26□□□□□ -0.93
UPF2-202ENST00000357604 GTPBP2Q9BX10 602 aaKnown RBP9.26□□□□□ -0.93
UPF2-202ENST00000357604 GPR174Q9BXC1 333 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 GSDMCQ9BYG8 508 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 CPEB1Q9BZB8 566 aaKnown RBP9.26□□□□□ -0.93
UPF2-202ENST00000357604 EIF2B3Q9NR50 452 aaKnown RBP9.26□□□□□ -0.93
UPF2-202ENST00000357604 OSER1Q9NX31 292 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 FAM8A1Q9UBU6 413 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 TTC7AQ9ULT0 858 aaPredicted RBP9.26□□□□□ -0.93
UPF2-202ENST00000357604 TCHHQ07283 1943 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 C5orf60A6NFR6 353 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 TTC34A8MYJ7 566 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 PRAMEF26H0Y7S4 382 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 WNT9AO14904 365 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 KRT15P19012 456 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 CCNHP51946 323 aaPredicted RBP9.26□□□□□ -0.93
UPF2-202ENST00000357604 PLK1P53350 603 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 PLOD1Q02809 727 aaPredicted RBP9.26□□□□□ -0.93
UPF2-202ENST00000357604 TNK2Q07912 1038 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 ILF3Q12906 894 aaKnown RBP eCLIP9.26□□□□□ -0.93
UPF2-202ENST00000357604 INSCQ1MX18 579 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 SLC9A4Q6AI14 798 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 PLPP6Q8IY26 295 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 PLD5Q8N7P1 536 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 PIGKQ92643 395 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 WDR26Q9H7D7 661 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 CATSPERZQ9NTU4 200 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 ZC3H7BQ9UGR2 993 aaKnown RBP9.26□□□□□ -0.93
UPF2-202ENST00000357604 TRMT6Q9UJA5 497 aaKnown RBP9.26□□□□□ -0.93
UPF2-202ENST00000357604 KLHL33A6NCF5 533 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 GCATO75600 419 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 ARHGEF15O94989 841 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 IGLV3-27P01718 113 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 APOA4P06727 396 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 SAT1P21673 171 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 ELOCQ15369 112 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 LONRF1Q17RB8 773 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 DUOXA1Q1HG43 343 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 FUT11Q495W5 492 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 PAPD7Q5XG87 772 aaKnown RBP9.26□□□□□ -0.93
UPF2-202ENST00000357604 PDPK2PQ6A1A2 396 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 C14orf80Q86SX3 495 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 C1orf210Q8IVY1 113 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 PHACTR4Q8IZ21 702 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.26□□□□□ -0.93
UPF2-202ENST00000357604 CXorf40BQ96DE9 158 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 PRICKLE1Q96MT3 831 aaPredicted RBP9.26□□□□□ -0.93
UPF2-202ENST00000357604 ZSCAN5AQ9BUG6 496 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 PRO3102Q9H379 93 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 EPB41L5Q9HCM4 733 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 SARS2Q9NP81 518 aaKnown RBP9.26□□□□□ -0.93
UPF2-202ENST00000357604 KCND1Q9NSA2 647 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 ZFATQ9P243 1243 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 LNPEPQ9UIQ6 1025 aa9.26□□□□□ -0.93
UPF2-202ENST00000357604 RASGRP1O95267 797 aa9.25□□□□□ -0.93
UPF2-202ENST00000357604 SLC6A4P31645 630 aa9.25□□□□□ -0.93
UPF2-202ENST00000357604 ABL2P42684 1182 aa9.25□□□□□ -0.93
UPF2-202ENST00000357604 GEN1Q17RS7 908 aa9.25□□□□□ -0.93
UPF2-202ENST00000357604 JAMLQ86YT9 394 aa9.25□□□□□ -0.93
UPF2-202ENST00000357604 PPP4R1Q8TF05 950 aa9.25□□□□□ -0.93
UPF2-202ENST00000357604 TMEM159Q96B96 161 aa9.25□□□□□ -0.93
UPF2-202ENST00000357604 P2RY11Q96G91 374 aa9.25□□□□□ -0.93
UPF2-202ENST00000357604 SERAC1Q96JX3 654 aa9.25□□□□□ -0.93
UPF2-202ENST00000357604 ZDHHC5Q9C0B5 715 aa9.25□□□□□ -0.93
UPF2-202ENST00000357604 ZNHIT2Q9UHR6 403 aa9.25□□□□□ -0.93
UPF2-202ENST00000357604 HLA-EP13747 358 aa9.25□□□□□ -0.93
UPF2-202ENST00000357604 TTPAP49638 278 aa9.25□□□□□ -0.93
UPF2-202ENST00000357604 CACNG1Q06432 222 aa9.25□□□□□ -0.93
UPF2-202ENST00000357604 TMEM196Q5HYL7 178 aa9.25□□□□□ -0.93
UPF2-202ENST00000357604 E4F1Q66K89 784 aaPredicted RBP9.25□□□□□ -0.93
UPF2-202ENST00000357604 IL12RB2Q99665 862 aa9.25□□□□□ -0.93
UPF2-202ENST00000357604 TMEM121Q9BTD3 319 aa9.25□□□□□ -0.93
UPF2-202ENST00000357604 ABCG4Q9H172 646 aa9.25□□□□□ -0.93
UPF2-202ENST00000357604 NEU2Q9Y3R4 380 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms