RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 NAT14Q8WUY8 206 aa10.61□□□□□ -0.71
FXR1-202ENST00000357559 AGO4Q9HCK5 861 aaKnown RBP10.61□□□□□ -0.71
FXR1-202ENST00000357559 DNPEPQ9ULA0 475 aa10.61□□□□□ -0.71
FXR1-202ENST00000357559 CD44P16070 742 aaKnown RBP10.6□□□□□ -0.71
FXR1-202ENST00000357559 NPR3P17342 541 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 PLGRKTQ9HBL7 147 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 FKBP14Q9NWM8 211 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 DNMT3LQ9UJW3 386 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 RPS6KA6Q9UK32 745 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 TBC1D3DA0A087WVF3 549 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 TBC1D3IA0A087WXS9 549 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 TBC1D3EA0A087X179 549 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 TBC1D3KA0A087X1G2 549 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 TBC1D3FA6NER0 549 aaPredicted RBP10.6□□□□□ -0.71
FXR1-202ENST00000357559 TBC1D3LB9A6J9 549 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 LOC110117498-PIK3R3F6TDL0 507 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 PLIN3O60664 434 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 TBC1D3HP0C7X1 549 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 HERVK_113P62684 666 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 TBC1D3GQ6DHY5 549 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 TBC1D3CQ6IPX1 549 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 TBC1D3Q8IZP1 549 aaPredicted RBP10.6□□□□□ -0.71
FXR1-202ENST00000357559 CADM2Q8N3J6 435 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 APOPT1Q96IL0 206 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 IFT46Q9NQC8 304 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 NECTIN3Q9NQS3 549 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 MSRAQ9UJ68 235 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 GTF3C4Q9UKN8 822 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 PNPLA7Q6ZV29 1317 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 ADGRL3Q9HAR2 1447 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 MYH6P13533 1939 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 CAMTA2O94983 1202 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 MNDAP41218 407 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 RIPK1Q13546 671 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 PRAMEF19Q5SWL8 479 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 AMIGO1Q86WK6 493 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 RIT2Q99578 217 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 CYP3A43Q9HB55 503 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 SAMHD1Q9Y3Z3 626 aaKnown RBP10.6□□□□□ -0.71
FXR1-202ENST00000357559 OVOS2A0A0G2JMS6 1433 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 OVOS2A0A0J9YW53 1432 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 OVOS2Q6IE36 1432 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 A0A087X0B3 334 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 ZSCAN5CA6NGD5 496 aaPredicted RBP10.6□□□□□ -0.71
FXR1-202ENST00000357559 H3BRB1 525 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 XKRYO14609 159 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 UBE2R2Q712K3 238 aaPredicted RBP10.6□□□□□ -0.71
FXR1-202ENST00000357559 SLC34A3Q8N130 599 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 ZNF75CPQ92670 426 aaPredicted RBP10.6□□□□□ -0.71
FXR1-202ENST00000357559 FAIM2Q9BWQ8 316 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 CDHR2Q9BYE9 1310 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 G3V2T6 193 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 PGRMC2O15173 223 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 CCNDBP1O95273 360 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 INSRRP14616 1297 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 IL12AP29459 219 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 WASP42768 502 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 CASP5P51878 434 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 SLC7A2P52569 658 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 ZMYND11Q15326 602 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 SF1Q15637 639 aaKnown RBP10.6□□□□□ -0.71
FXR1-202ENST00000357559 TOR1AIP1Q5JTV8 583 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 SAMD4BQ5PRF9 694 aaKnown RBP10.6□□□□□ -0.71
FXR1-202ENST00000357559 ZNF730Q6ZMV8 503 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 GET4Q7L5D6 327 aaPredicted RBP10.6□□□□□ -0.71
FXR1-202ENST00000357559 ZNF571Q7Z3V5 609 aaPredicted RBP10.6□□□□□ -0.71
FXR1-202ENST00000357559 CAMK1DQ8IU85 385 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 DEFB106AQ8N104 65 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 FAM151AQ8WW52 585 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 CST11Q9H112 138 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 CERS4Q9HA82 394 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 DPP7Q9UHL4 492 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 IQCF5A8MTL0 148 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 QSOX1O00391 747 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 ETS2P15036 469 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 RPL21P46778 160 aaKnown RBP10.6□□□□□ -0.71
FXR1-202ENST00000357559 IFI35P80217 286 aaPredicted RBP10.6□□□□□ -0.71
FXR1-202ENST00000357559 DNASE1L2Q92874 299 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 MYDGFQ969H8 173 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 ITCHQ96J02 903 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 LMLNQ96KR4 655 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 IDI2Q9BXS1 227 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 CRNNQ9UBG3 495 aaPredicted RBP10.6□□□□□ -0.71
FXR1-202ENST00000357559 UNC13AQ9UPW8 1703 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 CROCC2H7BZ55 1655 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 E7ENQ6 273 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 SLC25A3Q00325 362 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 TCEAL6Q6IPX3 200 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 KCNT2Q6UVM3 1135 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 TMPRSS9Q7Z410 1059 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 Q96MT0 163 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 POLR1EQ9GZS1 481 aaKnown RBP10.6□□□□□ -0.71
FXR1-202ENST00000357559 NDUFA13Q9P0J0 144 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 GRIP1Q9Y3R0 1128 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 PCDHA3Q9Y5H8 950 aa10.6□□□□□ -0.71
FXR1-202ENST00000357559 SMCO3A2RU48 225 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 EME2A4GXA9 379 aaPredicted RBP10.59□□□□□ -0.71
FXR1-202ENST00000357559 GRB10Q13322 594 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 MAPKAPK3Q16644 382 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 HAVCR1Q96D42 359 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms