RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 ZNF641Q96N77 438 aaPredicted RBP25.59■■□□□ 1.69
SSBP3-202ENST00000357475 RAB17Q9H0T7 212 aa25.59■■□□□ 1.69
SSBP3-202ENST00000357475 EPB41L5Q9HCM4 733 aa25.59■■□□□ 1.69
SSBP3-202ENST00000357475 SERGEFQ9UGK8 458 aa25.59■■□□□ 1.69
SSBP3-202ENST00000357475 LOC285095A0A1B0GVY8 99 aa25.58■■□□□ 1.69
SSBP3-202ENST00000357475 GOLGA8MH3BSY2 632 aa25.58■■□□□ 1.69
SSBP3-202ENST00000357475 TNFRSF10AO00220 468 aa25.58■■□□□ 1.69
SSBP3-202ENST00000357475 SOCS5O75159 536 aa25.58■■□□□ 1.69
SSBP3-202ENST00000357475 ATXN1LP0C7T5 689 aaKnown RBP25.58■■□□□ 1.69
SSBP3-202ENST00000357475 ITIH2P19823 946 aa25.58■■□□□ 1.69
SSBP3-202ENST00000357475 SLC8A1P32418 973 aa25.58■■□□□ 1.69
SSBP3-202ENST00000357475 ITGA8P53708 1063 aa25.58■■□□□ 1.69
SSBP3-202ENST00000357475 SEMG2Q02383 582 aa25.58■■□□□ 1.69
SSBP3-202ENST00000357475 MTM1Q13496 603 aa25.58■■□□□ 1.69
SSBP3-202ENST00000357475 ZNF805Q5CZA5 627 aa25.58■■□□□ 1.69
SSBP3-202ENST00000357475 ZNF776Q68DI1 518 aaPredicted RBP25.58■■□□□ 1.69
SSBP3-202ENST00000357475 ZNF534Q76KX8 674 aa25.58■■□□□ 1.69
SSBP3-202ENST00000357475 DSG4Q86SJ6 1040 aa25.58■■□□□ 1.69
SSBP3-202ENST00000357475 LPCAT1Q8NF37 534 aa25.58■■□□□ 1.69
SSBP3-202ENST00000357475 PIH1D2Q8WWB5 315 aa25.58■■□□□ 1.69
SSBP3-202ENST00000357475 LRIG1Q96JA1 1093 aa25.58■■□□□ 1.69
SSBP3-202ENST00000357475 FEM1CQ96JP0 617 aa25.58■■□□□ 1.69
SSBP3-202ENST00000357475 PWWP2AQ96N64 755 aa25.58■■□□□ 1.69
SSBP3-202ENST00000357475 TBL1YQ9BQ87 522 aa25.58■■□□□ 1.69
SSBP3-202ENST00000357475 FSD1LQ9BXM9 530 aa25.58■■□□□ 1.69
SSBP3-202ENST00000357475 OSBPL1AQ9BXW6 950 aa25.58■■□□□ 1.69
SSBP3-202ENST00000357475 FAM86C2PA6NEL3 165 aa25.58■■□□□ 1.68
SSBP3-202ENST00000357475 DRD3P35462 400 aa25.58■■□□□ 1.68
SSBP3-202ENST00000357475 CLCN5P51795 746 aa25.58■■□□□ 1.68
SSBP3-202ENST00000357475 DGKEP52429 567 aa25.58■■□□□ 1.68
SSBP3-202ENST00000357475 GRM3Q14832 879 aa25.58■■□□□ 1.68
SSBP3-202ENST00000357475 SIRPB2Q5JXA9 342 aa25.58■■□□□ 1.68
SSBP3-202ENST00000357475 ARMC12Q5T9G4 340 aa25.58■■□□□ 1.68
SSBP3-202ENST00000357475 DENND5AQ6IQ26 1287 aa25.58■■□□□ 1.68
SSBP3-202ENST00000357475 ANO7Q6IWH7 933 aa25.58■■□□□ 1.68
SSBP3-202ENST00000357475 RANBP10Q6VN20 620 aa25.58■■□□□ 1.68
SSBP3-202ENST00000357475 PPIL6Q8IXY8 311 aa25.58■■□□□ 1.68
SSBP3-202ENST00000357475 SEC14L1Q92503 715 aa25.58■■□□□ 1.68
SSBP3-202ENST00000357475 PRCCQ92733 491 aaPredicted RBP25.58■■□□□ 1.68
SSBP3-202ENST00000357475 IFT43Q96FT9 208 aa25.58■■□□□ 1.68
SSBP3-202ENST00000357475 LRRC40Q9H9A6 602 aa25.58■■□□□ 1.68
SSBP3-202ENST00000357475 ZDBF2Q9HCK1 2354 aa25.57■■□□□ 1.68
SSBP3-202ENST00000357475 A0A0U1RQS6 177 aa25.57■■□□□ 1.68
SSBP3-202ENST00000357475 TSPAN11A1L157 253 aa25.57■■□□□ 1.68
SSBP3-202ENST00000357475 C16orf96A6NNT2 1141 aa25.57■■□□□ 1.68
SSBP3-202ENST00000357475 C1QTNF3-AMACRE9PGA6 284 aa25.57■■□□□ 1.68
SSBP3-202ENST00000357475 RNASEH1O60930 286 aaKnown RBP25.57■■□□□ 1.68
SSBP3-202ENST00000357475 SUN1O94901 812 aa25.57■■□□□ 1.68
SSBP3-202ENST00000357475 CTPS1P17812 591 aa25.57■■□□□ 1.68
SSBP3-202ENST00000357475 TPSB2P20231 275 aa25.57■■□□□ 1.68
SSBP3-202ENST00000357475 PXNP49023 591 aaPredicted RBP25.57■■□□□ 1.68
SSBP3-202ENST00000357475 NAA30Q147X3 362 aaPredicted RBP25.57■■□□□ 1.68
SSBP3-202ENST00000357475 TPSAB1Q15661 275 aa25.57■■□□□ 1.68
SSBP3-202ENST00000357475 HIBCHQ6NVY1 386 aaPredicted RBP25.57■■□□□ 1.68
SSBP3-202ENST00000357475 KIAA1324Q6UXG2 1013 aaKnown RBP25.57■■□□□ 1.68
SSBP3-202ENST00000357475 MDGA1Q8NFP4 955 aa25.57■■□□□ 1.68
SSBP3-202ENST00000357475 OR52K1Q8NGK4 314 aa25.57■■□□□ 1.68
SSBP3-202ENST00000357475 POLMQ9NP87 494 aaPredicted RBP25.57■■□□□ 1.68
SSBP3-202ENST00000357475 EIF2B3Q9NR50 452 aaKnown RBP25.57■■□□□ 1.68
SSBP3-202ENST00000357475 CACNA1IQ9P0X4 2223 aa25.56■■□□□ 1.68
SSBP3-202ENST00000357475 TIMP2P16035 220 aa25.56■■□□□ 1.68
SSBP3-202ENST00000357475 ITGB7P26010 798 aa25.56■■□□□ 1.68
SSBP3-202ENST00000357475 CNTN1Q12860 1018 aa25.56■■□□□ 1.68
SSBP3-202ENST00000357475 SLC1A5Q15758 541 aa25.56■■□□□ 1.68
SSBP3-202ENST00000357475 QPCTQ16769 361 aa25.56■■□□□ 1.68
SSBP3-202ENST00000357475 TMEM31Q5JXX7 168 aa25.56■■□□□ 1.68
SSBP3-202ENST00000357475 ZDHHC24Q6UX98 284 aa25.56■■□□□ 1.68
SSBP3-202ENST00000357475 TSTD1Q8NFU3 115 aa25.56■■□□□ 1.68
SSBP3-202ENST00000357475 SIPA1Q96FS4 1042 aa25.56■■□□□ 1.68
SSBP3-202ENST00000357475 PPP1R2P1Q96PQ5 205 aa25.56■■□□□ 1.68
SSBP3-202ENST00000357475 ANKZF1Q9H8Y5 726 aa25.56■■□□□ 1.68
SSBP3-202ENST00000357475 FBRSQ9HAH7 460 aa25.56■■□□□ 1.68
SSBP3-202ENST00000357475 C11orf16Q9NQ32 467 aa25.56■■□□□ 1.68
SSBP3-202ENST00000357475 A0A1W2PP55 124 aa25.55■■□□□ 1.68
SSBP3-202ENST00000357475 GOLGA6CA6NDK9 693 aa25.55■■□□□ 1.68
SSBP3-202ENST00000357475 GOLGA6BA6NDN3 693 aa25.55■■□□□ 1.68
SSBP3-202ENST00000357475 NDST3O95803 873 aa25.55■■□□□ 1.68
SSBP3-202ENST00000357475 CPP00450 1065 aa25.55■■□□□ 1.68
SSBP3-202ENST00000357475 ALPIP09923 528 aa25.55■■□□□ 1.68
SSBP3-202ENST00000357475 PIRTP0C851 137 aa25.55■■□□□ 1.68
SSBP3-202ENST00000357475 GOLGA6DP0CG33 693 aa25.55■■□□□ 1.68
SSBP3-202ENST00000357475 ABL2P42684 1182 aa25.55■■□□□ 1.68
SSBP3-202ENST00000357475 PAF1Q8N7H5 531 aa25.55■■□□□ 1.68
SSBP3-202ENST00000357475 NEUROG2Q9H2A3 272 aa25.55■■□□□ 1.68
SSBP3-202ENST00000357475 PABPC3Q9H361 631 aaKnown RBP25.55■■□□□ 1.68
SSBP3-202ENST00000357475 SPATA6Q9NWH7 488 aaPredicted RBP25.55■■□□□ 1.68
SSBP3-202ENST00000357475 GOLGA6AQ9NYA3 693 aa25.55■■□□□ 1.68
SSBP3-202ENST00000357475 WHRNQ9P202 907 aa25.55■■□□□ 1.68
SSBP3-202ENST00000357475 DKK3Q9UBP4 350 aa25.55■■□□□ 1.68
SSBP3-202ENST00000357475 EBF1Q9UH73 591 aa25.55■■□□□ 1.68
SSBP3-202ENST00000357475 ANAPC5Q9UJX4 755 aa25.55■■□□□ 1.68
SSBP3-202ENST00000357475 NUMA1Q14980 2115 aa25.55■■□□□ 1.68
SSBP3-202ENST00000357475 ERI2A8K979 691 aaKnown RBP25.54■■□□□ 1.68
SSBP3-202ENST00000357475 K7ESF4 209 aa25.54■■□□□ 1.68
SSBP3-202ENST00000357475 PSMD3O43242 534 aa25.54■■□□□ 1.68
SSBP3-202ENST00000357475 SPINT1O43278 529 aa25.54■■□□□ 1.68
SSBP3-202ENST00000357475 AVILO75366 819 aa25.54■■□□□ 1.68
SSBP3-202ENST00000357475 ADH1BP00325 375 aa25.54■■□□□ 1.68
SSBP3-202ENST00000357475 C7P10643 843 aa25.54■■□□□ 1.68
SSBP3-202ENST00000357475 TPH1P17752 444 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms