RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 PRR23AA6NEV1 266 aa11.83□□□□□ -0.52
COL9A1-202ENST00000357250 H3BN98 237 aa11.83□□□□□ -0.52
COL9A1-202ENST00000357250 AZIN1O14977 448 aa11.83□□□□□ -0.52
COL9A1-202ENST00000357250 BPGMP07738 259 aa11.83□□□□□ -0.52
COL9A1-202ENST00000357250 CRHR1P34998 444 aa11.83□□□□□ -0.52
COL9A1-202ENST00000357250 ANGPT1Q15389 498 aa11.83□□□□□ -0.52
COL9A1-202ENST00000357250 PSMD5Q16401 504 aa11.83□□□□□ -0.52
COL9A1-202ENST00000357250 ATP13A4Q4VNC1 1196 aa11.83□□□□□ -0.52
COL9A1-202ENST00000357250 NEK10Q6ZWH5 1172 aa11.83□□□□□ -0.52
COL9A1-202ENST00000357250 R3HCC1LQ7Z5L2 792 aaKnown RBP11.83□□□□□ -0.52
COL9A1-202ENST00000357250 AMER2Q8N7J2 671 aa11.83□□□□□ -0.52
COL9A1-202ENST00000357250 IRGQQ8WZA9 623 aa11.83□□□□□ -0.52
COL9A1-202ENST00000357250 SUSD6Q92537 303 aa11.83□□□□□ -0.52
COL9A1-202ENST00000357250 MYLPFQ96A32 169 aa11.83□□□□□ -0.52
COL9A1-202ENST00000357250 DAPK2Q9UIK4 370 aa11.83□□□□□ -0.52
COL9A1-202ENST00000357250 C1orf232A0A0U1RR37 186 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 FAM25AB3EWG3 89 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 FAM25CB3EWG5 89 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 FAM25GB3EWG6 89 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 DDX3YO15523 660 aaKnown RBP11.82□□□□□ -0.52
COL9A1-202ENST00000357250 FYNP06241 537 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 GOT1P17174 413 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 ATP6V1C1P21283 382 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 ADSLP30566 484 aaPredicted RBP11.82□□□□□ -0.52
COL9A1-202ENST00000357250 PTDSS1P48651 473 aaKnown RBP11.82□□□□□ -0.52
COL9A1-202ENST00000357250 PKNOX1P55347 436 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 HDDC2Q7Z4H3 204 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 FAM35AQ86V20 835 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 PROSER1Q86XN7 944 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 RNF148Q8N7C7 305 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 PPTC7Q8NI37 304 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 TIFAQ96CG3 184 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 TPD52L3Q96J77 140 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 SEMA3CQ99985 751 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 RTKNQ9BST9 563 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 NIFKQ9BYG3 293 aaKnown RBP11.82□□□□□ -0.52
COL9A1-202ENST00000357250 RNPEPQ9H4A4 650 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 PIF1Q9H611 641 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 MRPL17Q9NRX2 175 aaKnown RBP11.82□□□□□ -0.52
COL9A1-202ENST00000357250 PNPLA3Q9NST1 481 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 ANGPT4Q9Y264 503 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 COMMD3-BMI1R4GMX3 469 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 ROBO1Q9Y6N7 1651 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 TOPAZ1Q8N9V7 1692 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 A0A1W2PQ67 120 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 B4GALT5O43286 388 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 ASGR1P07306 291 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 GTF2E2P29084 291 aaKnown RBP11.82□□□□□ -0.52
COL9A1-202ENST00000357250 NOS3P29474 1203 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 RFX3P48380 749 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 NEDD8Q15843 81 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 FGD3Q5JSP0 725 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 MFSD4BQ5TF39 518 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 RAP1GAP2Q684P5 730 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 FBXL19Q6PCT2 694 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 VSTM1Q6UX27 236 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 TSHZ1Q6ZSZ6 1077 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 SPPL2BQ8TCT7 592 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 PYDC1Q8WXC3 89 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 CDH19Q9H159 772 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 CRNNQ9UBG3 495 aaPredicted RBP11.82□□□□□ -0.52
COL9A1-202ENST00000357250 ZNF232Q9UNY5 417 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 KPNA3O00505 521 aaPredicted RBP11.82□□□□□ -0.52
COL9A1-202ENST00000357250 ASNA1O43681 348 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 ANPEPP15144 967 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 TLX1P31314 330 aaPredicted RBP11.82□□□□□ -0.52
COL9A1-202ENST00000357250 C16orf72Q14CZ0 275 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 PTPRNQ16849 979 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 LLGL2Q6P1M3 1020 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 PCDH20Q8N6Y1 951 aaKnown RBP11.82□□□□□ -0.52
COL9A1-202ENST00000357250 KREMEN1Q96MU8 473 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 C7orf26Q96N11 449 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 TCF12Q99081 682 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 PRDM8Q9NQV8 689 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 FBXO6Q9NRD1 293 aaPredicted RBP11.82□□□□□ -0.52
COL9A1-202ENST00000357250 PRKAG3Q9UGI9 489 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 PLIN4Q96Q06 1357 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 LIN7AO14910 233 aaPredicted RBP11.82□□□□□ -0.52
COL9A1-202ENST00000357250 MARK2Q7KZI7 788 aaKnown RBP11.82□□□□□ -0.52
COL9A1-202ENST00000357250 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.82□□□□□ -0.52
COL9A1-202ENST00000357250 RBFAQ8N0V3 343 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 TSPAN14Q8NG11 270 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 MYDGFQ969H8 173 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 CORO1CQ9ULV4 474 aaPredicted RBP11.82□□□□□ -0.52
COL9A1-202ENST00000357250 VWA7Q9Y334 891 aa11.82□□□□□ -0.52
COL9A1-202ENST00000357250 PHLPP1O60346 1717 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 EFCAB10A6NFE3 127 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 MDM4O15151 490 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 PMM2O15305 246 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 FARP2O94887 1054 aaPredicted RBP11.81□□□□□ -0.52
COL9A1-202ENST00000357250 ABCB1P08183 1280 aaPredicted RBP11.81□□□□□ -0.52
COL9A1-202ENST00000357250 TSPAN19P0C672 248 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 VAV1P15498 845 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 PPM1AP35813 382 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 GRIA3P42263 894 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 SLC25A3Q00325 362 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 HLA-DQA1Q5Y7H0 255 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 DRICH1Q6PGQ1 229 aaPredicted RBP11.81□□□□□ -0.52
COL9A1-202ENST00000357250 FOXR1Q6PIV2 292 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 CYP20A1Q6UW02 462 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms