RNA–Protein interactions for RNA: ENST00000356924.8

ABCD4-201, Transcript of ATP binding cassette subfamily D member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCD4, Length 3,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-201ENST00000356924 PDLIM1O00151 329 aa11.22□□□□□ -0.61
ABCD4-201ENST00000356924 FGF19O95750 216 aa11.22□□□□□ -0.61
ABCD4-201ENST00000356924 CD160O95971 181 aa11.22□□□□□ -0.61
ABCD4-201ENST00000356924 NMBRP28336 390 aa11.22□□□□□ -0.61
ABCD4-201ENST00000356924 MZF1P28698 734 aaPredicted RBP11.22□□□□□ -0.61
ABCD4-201ENST00000356924 PBX2P40425 430 aa11.22□□□□□ -0.61
ABCD4-201ENST00000356924 NTHL1P78549 312 aa11.22□□□□□ -0.61
ABCD4-201ENST00000356924 ARF5P84085 180 aa11.22□□□□□ -0.61
ABCD4-201ENST00000356924 CYTH1Q15438 398 aa11.22□□□□□ -0.61
ABCD4-201ENST00000356924 CCDC6Q16204 474 aa11.22□□□□□ -0.61
ABCD4-201ENST00000356924 WASHC2DQ5SRD0 308 aa11.22□□□□□ -0.61
ABCD4-201ENST00000356924 ZNF449Q6P9G9 518 aa11.22□□□□□ -0.61
ABCD4-201ENST00000356924 ZNF783Q6ZMS7 281 aa11.22□□□□□ -0.61
ABCD4-201ENST00000356924 ANKRD42Q8N9B4 389 aa11.22□□□□□ -0.61
ABCD4-201ENST00000356924 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.22□□□□□ -0.61
ABCD4-201ENST00000356924 DENND1AQ8TEH3 1009 aa11.22□□□□□ -0.61
ABCD4-201ENST00000356924 TMA16Q96EY4 203 aaKnown RBP11.22□□□□□ -0.61
ABCD4-201ENST00000356924 ALG14Q96F25 216 aa11.22□□□□□ -0.61
ABCD4-201ENST00000356924 CERS2Q96G23 380 aa11.22□□□□□ -0.61
ABCD4-201ENST00000356924 ZNF778Q96MU6 729 aa11.22□□□□□ -0.61
ABCD4-201ENST00000356924 GBP5Q96PP8 586 aa11.22□□□□□ -0.61
ABCD4-201ENST00000356924 VCX3BQ9H321 246 aa11.22□□□□□ -0.61
ABCD4-201ENST00000356924 ARNT2Q9HBZ2 717 aa11.22□□□□□ -0.61
ABCD4-201ENST00000356924 VCX3AQ9NNX9 186 aa11.22□□□□□ -0.61
ABCD4-201ENST00000356924 SSU72Q9NP77 194 aaKnown RBP11.22□□□□□ -0.61
ABCD4-201ENST00000356924 UBA2Q9UBT2 640 aaPredicted RBP11.22□□□□□ -0.61
ABCD4-201ENST00000356924 CCL26Q9Y258 94 aa11.22□□□□□ -0.61
ABCD4-201ENST00000356924 ZNF510Q9Y2H8 683 aa11.22□□□□□ -0.61
ABCD4-201ENST00000356924 ZMPSTE24O75844 475 aa11.21□□□□□ -0.61
ABCD4-201ENST00000356924 LMNAP02545 664 aaKnown RBP11.21□□□□□ -0.61
ABCD4-201ENST00000356924 HNRNPA1P09651 372 aaKnown RBP eCLIP11.21□□□□□ -0.61
ABCD4-201ENST00000356924 ERVK-10P10266 1014 aa11.21□□□□□ -0.61
ABCD4-201ENST00000356924 DDX6P26196 483 aaKnown RBP eCLIP11.21□□□□□ -0.61
ABCD4-201ENST00000356924 RGRP47804 291 aa11.21□□□□□ -0.61
ABCD4-201ENST00000356924 MGAT5Q09328 741 aa11.21□□□□□ -0.61
ABCD4-201ENST00000356924 PCID2Q5JVF3 399 aa11.21□□□□□ -0.61
ABCD4-201ENST00000356924 PDE12Q6L8Q7 609 aaKnown RBP11.21□□□□□ -0.61
ABCD4-201ENST00000356924 KDELC2Q7Z4H8 507 aa11.21□□□□□ -0.61
ABCD4-201ENST00000356924 CKAP2Q8WWK9 683 aa11.21□□□□□ -0.61
ABCD4-201ENST00000356924 ZNF707Q96C28 371 aaPredicted RBP11.21□□□□□ -0.61
ABCD4-201ENST00000356924 IFT43Q96FT9 208 aa11.21□□□□□ -0.61
ABCD4-201ENST00000356924 SMC6Q96SB8 1091 aa11.21□□□□□ -0.61
ABCD4-201ENST00000356924 SEMA3CQ99985 751 aa11.21□□□□□ -0.61
ABCD4-201ENST00000356924 MGME1Q9BQP7 344 aa11.21□□□□□ -0.61
ABCD4-201ENST00000356924 POLR1EQ9GZS1 481 aaKnown RBP11.21□□□□□ -0.61
ABCD4-201ENST00000356924 DCLRE1BQ9H816 532 aa11.21□□□□□ -0.61
ABCD4-201ENST00000356924 VPS45Q9NRW7 570 aa11.21□□□□□ -0.61
ABCD4-201ENST00000356924 IKBKGQ9Y6K9 419 aa11.21□□□□□ -0.61
ABCD4-201ENST00000356924 hCG_2014768A0A024R1R8 64 aa11.21□□□□□ -0.62
ABCD4-201ENST00000356924 KRT4P19013 534 aa11.21□□□□□ -0.62
ABCD4-201ENST00000356924 RASSF2P50749 326 aa11.21□□□□□ -0.62
ABCD4-201ENST00000356924 SLC18A1P54219 525 aa11.21□□□□□ -0.62
ABCD4-201ENST00000356924 NAB1Q13506 487 aa11.21□□□□□ -0.62
ABCD4-201ENST00000356924 RCN2Q14257 317 aa11.21□□□□□ -0.62
ABCD4-201ENST00000356924 ZNF235Q14590 738 aa11.21□□□□□ -0.62
ABCD4-201ENST00000356924 ZRSR2Q15696 482 aaKnown RBP11.21□□□□□ -0.62
ABCD4-201ENST00000356924 SMAD1Q15797 465 aaKnown RBP11.21□□□□□ -0.62
ABCD4-201ENST00000356924 PKN3Q6P5Z2 889 aa11.21□□□□□ -0.62
ABCD4-201ENST00000356924 RASSF3Q86WH2 238 aa11.21□□□□□ -0.62
ABCD4-201ENST00000356924 TTC16Q8NEE8 873 aa11.21□□□□□ -0.62
ABCD4-201ENST00000356924 UCMAQ8WVF2 138 aa11.21□□□□□ -0.62
ABCD4-201ENST00000356924 FAM136AQ96C01 138 aa11.21□□□□□ -0.62
ABCD4-201ENST00000356924 GRAMD1AQ96CP6 724 aa11.21□□□□□ -0.62
ABCD4-201ENST00000356924 KLF6Q99612 283 aaPredicted RBP11.21□□□□□ -0.62
ABCD4-201ENST00000356924 FSD1LQ9BXM9 530 aa11.21□□□□□ -0.62
ABCD4-201ENST00000356924 FAM192AQ9GZU8 254 aa11.21□□□□□ -0.62
ABCD4-201ENST00000356924 PSAT1Q9Y617 370 aa11.21□□□□□ -0.62
ABCD4-201ENST00000356924 LOC285095A0A1B0GVY8 99 aa11.2□□□□□ -0.62
ABCD4-201ENST00000356924 FAM47DPA6NHR8 397 aa11.2□□□□□ -0.62
ABCD4-201ENST00000356924 TRIM49D1C9J1S8 452 aa11.2□□□□□ -0.62
ABCD4-201ENST00000356924 H0Y626 953 aa11.2□□□□□ -0.62
ABCD4-201ENST00000356924 SNAP91O60641 907 aa11.2□□□□□ -0.62
ABCD4-201ENST00000356924 ATXN1LP0C7T5 689 aaKnown RBP11.2□□□□□ -0.62
ABCD4-201ENST00000356924 GM2AP17900 193 aa11.2□□□□□ -0.62
ABCD4-201ENST00000356924 VHLP40337 213 aa11.2□□□□□ -0.62
ABCD4-201ENST00000356924 WDR4P57081 412 aaKnown RBP11.2□□□□□ -0.62
ABCD4-201ENST00000356924 SESN3P58005 492 aa11.2□□□□□ -0.62
ABCD4-201ENST00000356924 SLC18A2Q05940 514 aa11.2□□□□□ -0.62
ABCD4-201ENST00000356924 RFTN1Q14699 578 aaPredicted RBP11.2□□□□□ -0.62
ABCD4-201ENST00000356924 ZNF697Q5TEC3 545 aa11.2□□□□□ -0.62
ABCD4-201ENST00000356924 PACS1Q6VY07 963 aa11.2□□□□□ -0.62
ABCD4-201ENST00000356924 CMTM8Q8IZV2 173 aa11.2□□□□□ -0.62
ABCD4-201ENST00000356924 SLC25A41Q8N5S1 370 aa11.2□□□□□ -0.62
ABCD4-201ENST00000356924 BANPQ8N9N5 519 aa11.2□□□□□ -0.62
ABCD4-201ENST00000356924 TDRD5Q8NAT2 981 aaKnown RBP11.2□□□□□ -0.62
ABCD4-201ENST00000356924 GDAP1Q8TB36 358 aa11.2□□□□□ -0.62
ABCD4-201ENST00000356924 LRRC8CQ8TDW0 803 aa11.2□□□□□ -0.62
ABCD4-201ENST00000356924 SH3RF2Q8TEC5 729 aa11.2□□□□□ -0.62
ABCD4-201ENST00000356924 INPP5DQ92835 1189 aa11.2□□□□□ -0.62
ABCD4-201ENST00000356924 NDNQ99608 321 aa11.2□□□□□ -0.62
ABCD4-201ENST00000356924 MUC3BQ9H195 1237 aa11.2□□□□□ -0.62
ABCD4-201ENST00000356924 TASP1Q9H6P5 420 aa11.2□□□□□ -0.62
ABCD4-201ENST00000356924 CERS4Q9HA82 394 aa11.2□□□□□ -0.62
ABCD4-201ENST00000356924 MRM3Q9HC36 420 aaKnown RBP11.2□□□□□ -0.62
ABCD4-201ENST00000356924 SEPT3Q9UH03 358 aa11.2□□□□□ -0.62
ABCD4-201ENST00000356924 TCAF1Q9Y4C2 921 aa11.2□□□□□ -0.62
ABCD4-201ENST00000356924 GOLGA8RI6L899 631 aa11.2□□□□□ -0.62
ABCD4-201ENST00000356924 ZSCAN9O15535 394 aaPredicted RBP11.2□□□□□ -0.62
ABCD4-201ENST00000356924 MT-ND3P03897 115 aa11.2□□□□□ -0.62
ABCD4-201ENST00000356924 SNRPAP09012 282 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms